RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 MCPH1Q8NEM0 835 aa12.76□□□□□ -0.37
SDCBP-211ENST00000523441 GAB3Q8WWW8 586 aa12.76□□□□□ -0.37
SDCBP-211ENST00000523441 EDEM2Q9BV94 578 aa12.76□□□□□ -0.37
SDCBP-211ENST00000523441 SMG9Q9H0W8 520 aaKnown RBP12.76□□□□□ -0.37
SDCBP-211ENST00000523441 C8orf33Q9H7E9 229 aaPredicted RBP12.76□□□□□ -0.37
SDCBP-211ENST00000523441 TRPV5Q9NQA5 729 aa12.76□□□□□ -0.37
SDCBP-211ENST00000523441 SLC8A2Q9UPR5 921 aa12.76□□□□□ -0.37
SDCBP-211ENST00000523441 YIPF1Q9Y548 306 aa12.76□□□□□ -0.37
SDCBP-211ENST00000523441 ANKRD11Q6UB99 2663 aaPredicted RBP12.75□□□□□ -0.37
SDCBP-211ENST00000523441 ZZEF1O43149 2961 aa12.75□□□□□ -0.37
SDCBP-211ENST00000523441 LAMA1P25391 3075 aa12.75□□□□□ -0.37
SDCBP-211ENST00000523441 ARHGEF35A5YM69 484 aa12.75□□□□□ -0.37
SDCBP-211ENST00000523441 WNT7AO00755 349 aa12.75□□□□□ -0.37
SDCBP-211ENST00000523441 DCLK1O15075 740 aa12.75□□□□□ -0.37
SDCBP-211ENST00000523441 CHADO15335 359 aa12.75□□□□□ -0.37
SDCBP-211ENST00000523441 MED24O75448 989 aa12.75□□□□□ -0.37
SDCBP-211ENST00000523441 SOAT2O75908 522 aa12.75□□□□□ -0.37
SDCBP-211ENST00000523441 LYPLA2O95372 231 aa12.75□□□□□ -0.37
SDCBP-211ENST00000523441 U2AF2P26368 475 aaKnown RBP eCLIP12.75□□□□□ -0.37
SDCBP-211ENST00000523441 MARCKSP29966 332 aaPredicted RBP12.75□□□□□ -0.37
SDCBP-211ENST00000523441 LIMK1P53667 647 aa12.75□□□□□ -0.37
SDCBP-211ENST00000523441 ZNF568Q3ZCX4 644 aa12.75□□□□□ -0.37
SDCBP-211ENST00000523441 GPR158Q5T848 1215 aa12.75□□□□□ -0.37
SDCBP-211ENST00000523441 ZNF280DQ6N043 979 aa12.75□□□□□ -0.37
SDCBP-211ENST00000523441 PADI6Q6TGC4 694 aa12.75□□□□□ -0.37
SDCBP-211ENST00000523441 HAUS6Q7Z4H7 955 aa12.75□□□□□ -0.37
SDCBP-211ENST00000523441 ARID3BQ8IVW6 561 aaPredicted RBP12.75□□□□□ -0.37
SDCBP-211ENST00000523441 ZMAT2Q96NC0 199 aaKnown RBP12.75□□□□□ -0.37
SDCBP-211ENST00000523441 LRRC3BQ96PB8 259 aa12.75□□□□□ -0.37
SDCBP-211ENST00000523441 HHIPQ96QV1 700 aa12.75□□□□□ -0.37
SDCBP-211ENST00000523441 CCDC94Q9BW85 323 aaPredicted RBP12.75□□□□□ -0.37
SDCBP-211ENST00000523441 LSM14BQ9BX40 385 aaKnown RBP12.75□□□□□ -0.37
SDCBP-211ENST00000523441 CCDC113Q9H0I3 377 aa12.75□□□□□ -0.37
SDCBP-211ENST00000523441 ATXN3LQ9H3M9 355 aa12.75□□□□□ -0.37
SDCBP-211ENST00000523441 SLC27A5Q9Y2P5 690 aa12.75□□□□□ -0.37
SDCBP-211ENST00000523441 CYP46A1Q9Y6A2 500 aa12.75□□□□□ -0.37
SDCBP-211ENST00000523441 SPEGQ15772 3267 aa12.75□□□□□ -0.37
SDCBP-211ENST00000523441 ANK1P16157 1881 aa12.74□□□□□ -0.37
SDCBP-211ENST00000523441 MYBPHLA2RUH7 354 aa12.74□□□□□ -0.37
SDCBP-211ENST00000523441 CCDC169A6NNP5 214 aa12.74□□□□□ -0.37
SDCBP-211ENST00000523441 NEMFO60524 1076 aa12.74□□□□□ -0.37
SDCBP-211ENST00000523441 MICAL2O94851 1124 aa12.74□□□□□ -0.37
SDCBP-211ENST00000523441 KRT2P35908 639 aa12.74□□□□□ -0.37
SDCBP-211ENST00000523441 SPAG1Q07617 926 aa12.74□□□□□ -0.37
SDCBP-211ENST00000523441 DUSP4Q13115 394 aa12.74□□□□□ -0.37
SDCBP-211ENST00000523441 UAP1L1Q3KQV9 507 aa12.74□□□□□ -0.37
SDCBP-211ENST00000523441 SEZ6Q53EL9 994 aa12.74□□□□□ -0.37
SDCBP-211ENST00000523441 SH3PXD2AQ5TCZ1 1133 aa12.74□□□□□ -0.37
SDCBP-211ENST00000523441 TPGS2Q68CL5 300 aa12.74□□□□□ -0.37
SDCBP-211ENST00000523441 RALGPS2Q86X27 583 aaPredicted RBP12.74□□□□□ -0.37
SDCBP-211ENST00000523441 CATSPER3Q86XQ3 398 aa12.74□□□□□ -0.37
SDCBP-211ENST00000523441 KCNB2Q92953 911 aa12.74□□□□□ -0.37
SDCBP-211ENST00000523441 IFT74Q96LB3 600 aa12.74□□□□□ -0.37
SDCBP-211ENST00000523441 TBC1D32Q96NH3 1257 aa12.74□□□□□ -0.37
SDCBP-211ENST00000523441 TCHPQ9BT92 498 aa12.74□□□□□ -0.37
SDCBP-211ENST00000523441 AFF4Q9UHB7 1163 aaKnown RBP12.74□□□□□ -0.37
SDCBP-211ENST00000523441 NUP205Q92621 2012 aa12.73□□□□□ -0.37
SDCBP-211ENST00000523441 SYN3O14994 580 aa12.73□□□□□ -0.37
SDCBP-211ENST00000523441 PAPSS2O95340 614 aaPredicted RBP12.73□□□□□ -0.37
SDCBP-211ENST00000523441 SPATA31C1P0DKV0 1188 aa12.73□□□□□ -0.37
SDCBP-211ENST00000523441 GBP1P32455 592 aa12.73□□□□□ -0.37
SDCBP-211ENST00000523441 NAMPTP43490 491 aa12.73□□□□□ -0.37
SDCBP-211ENST00000523441 RAP1GAPP47736 663 aa12.73□□□□□ -0.37
SDCBP-211ENST00000523441 EPHB3P54753 998 aa12.73□□□□□ -0.37
SDCBP-211ENST00000523441 EVCP57679 992 aa12.73□□□□□ -0.37
SDCBP-211ENST00000523441 CYP4F8P98187 520 aa12.73□□□□□ -0.37
SDCBP-211ENST00000523441 SCRN1Q12765 414 aa12.73□□□□□ -0.37
SDCBP-211ENST00000523441 CCINQ13939 588 aa12.73□□□□□ -0.37
SDCBP-211ENST00000523441 APBB1IPQ7Z5R6 666 aaPredicted RBP12.73□□□□□ -0.37
SDCBP-211ENST00000523441 FBXL16Q8N461 479 aa12.73□□□□□ -0.37
SDCBP-211ENST00000523441 DDX12PQ92771 950 aa12.73□□□□□ -0.37
SDCBP-211ENST00000523441 E2F7Q96AV8 911 aa12.73□□□□□ -0.37
SDCBP-211ENST00000523441 ZNF274Q96GC6 653 aaPredicted RBP12.73□□□□□ -0.37
SDCBP-211ENST00000523441 CDT1Q9H211 546 aa12.73□□□□□ -0.37
SDCBP-211ENST00000523441 CRISPLD1Q9H336 500 aa12.73□□□□□ -0.37
SDCBP-211ENST00000523441 TRPV4Q9HBA0 871 aa12.73□□□□□ -0.37
SDCBP-211ENST00000523441 VPS45Q9NRW7 570 aa12.73□□□□□ -0.37
SDCBP-211ENST00000523441 TOPORSQ9NS56 1045 aaPredicted RBP12.73□□□□□ -0.37
SDCBP-211ENST00000523441 SLC38A7Q9NVC3 462 aa12.73□□□□□ -0.37
SDCBP-211ENST00000523441 THADAQ6YHU6 1953 aa12.72□□□□□ -0.37
SDCBP-211ENST00000523441 K7ERI5 159 aa12.72□□□□□ -0.37
SDCBP-211ENST00000523441 CDKL5O76039 1030 aa12.72□□□□□ -0.37
SDCBP-211ENST00000523441 PRAMEF12O95522 483 aa12.72□□□□□ -0.37
SDCBP-211ENST00000523441 GABRR2P28476 465 aa12.72□□□□□ -0.37
SDCBP-211ENST00000523441 MCM7P33993 719 aa12.72□□□□□ -0.37
SDCBP-211ENST00000523441 ALDH1A3P47895 512 aa12.72□□□□□ -0.37
SDCBP-211ENST00000523441 FCHO2Q0JRZ9 810 aa12.72□□□□□ -0.37
SDCBP-211ENST00000523441 PSMD2Q13200 908 aa12.72□□□□□ -0.37
SDCBP-211ENST00000523441 PPP2R5AQ15172 486 aa12.72□□□□□ -0.37
SDCBP-211ENST00000523441 ARHGAP29Q52LW3 1261 aa12.72□□□□□ -0.37
SDCBP-211ENST00000523441 TRIM68Q6AZZ1 485 aa12.72□□□□□ -0.37
SDCBP-211ENST00000523441 TMC8Q8IU68 726 aa12.72□□□□□ -0.37
SDCBP-211ENST00000523441 TTC9BQ8N6N2 239 aa12.72□□□□□ -0.37
SDCBP-211ENST00000523441 LEMD2Q8NC56 503 aa12.72□□□□□ -0.37
SDCBP-211ENST00000523441 APPL2Q8NEU8 664 aa12.72□□□□□ -0.37
SDCBP-211ENST00000523441 ZCCHC14Q8WYQ9 949 aaKnown RBP12.72□□□□□ -0.37
SDCBP-211ENST00000523441 MSANTD3Q96H12 275 aa12.72□□□□□ -0.37
SDCBP-211ENST00000523441 LOXL4Q96JB6 756 aa12.72□□□□□ -0.37
SDCBP-211ENST00000523441 ACAP3Q96P50 834 aa12.72□□□□□ -0.37
SDCBP-211ENST00000523441 NACC1Q96RE7 527 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms