RNA–Protein interactions for RNA: ENST00000523417.5

TOP1MT-217, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 698 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-217ENST00000523417 STRA6Q9BX79 667 aa13.75□□□□□ -0.21
TOP1MT-217ENST00000523417 PLA2G2FQ9BZM2 168 aa13.75□□□□□ -0.21
TOP1MT-217ENST00000523417 ASB7Q9H672 318 aa13.75□□□□□ -0.21
TOP1MT-217ENST00000523417 RPF1Q9H9Y2 349 aaKnown RBP13.75□□□□□ -0.21
TOP1MT-217ENST00000523417 ZFP14Q9HCL3 533 aa13.75□□□□□ -0.21
TOP1MT-217ENST00000523417 FBXO4Q9UKT5 387 aa13.75□□□□□ -0.21
TOP1MT-217ENST00000523417 TRIP11Q15643 1979 aa13.74□□□□□ -0.21
TOP1MT-217ENST00000523417 ANO9A1A5B4 782 aa13.74□□□□□ -0.21
TOP1MT-217ENST00000523417 SHISA7A6NL88 538 aa13.74□□□□□ -0.21
TOP1MT-217ENST00000523417 FAM170BA6NMN3 283 aa13.74□□□□□ -0.21
TOP1MT-217ENST00000523417 PIRO00625 290 aa13.74□□□□□ -0.21
TOP1MT-217ENST00000523417 HNRNPDLO14979 420 aaKnown RBP13.74□□□□□ -0.21
TOP1MT-217ENST00000523417 NCAM2O15394 837 aa13.74□□□□□ -0.21
TOP1MT-217ENST00000523417 FAM13AO94988 1023 aa13.74□□□□□ -0.21
TOP1MT-217ENST00000523417 LMNAP02545 664 aaKnown RBP13.74□□□□□ -0.21
TOP1MT-217ENST00000523417 CEBPBP17676 345 aa13.74□□□□□ -0.21
TOP1MT-217ENST00000523417 PLCG1P19174 1290 aa13.74□□□□□ -0.21
TOP1MT-217ENST00000523417 PDCP20941 246 aa13.74□□□□□ -0.21
TOP1MT-217ENST00000523417 CCR2P41597 374 aa13.74□□□□□ -0.21
TOP1MT-217ENST00000523417 ARPP19P56211 112 aa13.74□□□□□ -0.21
TOP1MT-217ENST00000523417 LILRA4P59901 499 aa13.74□□□□□ -0.21
TOP1MT-217ENST00000523417 FOXK2Q01167 660 aa13.74□□□□□ -0.21
TOP1MT-217ENST00000523417 YWHAHQ04917 246 aaPredicted RBP13.74□□□□□ -0.21
TOP1MT-217ENST00000523417 GRIN1Q05586 938 aa13.74□□□□□ -0.21
TOP1MT-217ENST00000523417 FZD5Q13467 585 aa13.74□□□□□ -0.21
TOP1MT-217ENST00000523417 KARSQ15046 597 aaKnown RBP13.74□□□□□ -0.21
TOP1MT-217ENST00000523417 PTPAQ15257 358 aa13.74□□□□□ -0.21
TOP1MT-217ENST00000523417 FAM78AQ5JUQ0 283 aa13.74□□□□□ -0.21
TOP1MT-217ENST00000523417 ZBTB41Q5SVQ8 909 aa13.74□□□□□ -0.21
TOP1MT-217ENST00000523417 SLC39A4Q6P5W5 647 aa13.74□□□□□ -0.21
TOP1MT-217ENST00000523417 ZNF720Q7Z2F6 126 aa13.74□□□□□ -0.21
TOP1MT-217ENST00000523417 ADSSL1Q8N142 457 aa13.74□□□□□ -0.21
TOP1MT-217ENST00000523417 ELMOD1Q8N336 334 aa13.74□□□□□ -0.21
TOP1MT-217ENST00000523417 ST13P5Q8NFI4 369 aaPredicted RBP13.74□□□□□ -0.21
TOP1MT-217ENST00000523417 ING5Q8WYH8 240 aa13.74□□□□□ -0.21
TOP1MT-217ENST00000523417 LARP4BQ92615 738 aaKnown RBP13.74□□□□□ -0.21
TOP1MT-217ENST00000523417 NELL1Q92832 810 aa13.74□□□□□ -0.21
TOP1MT-217ENST00000523417 E2F7Q96AV8 911 aa13.74□□□□□ -0.21
TOP1MT-217ENST00000523417 TCEAL4Q96EI5 215 aa13.74□□□□□ -0.21
TOP1MT-217ENST00000523417 BICD1Q96G01 975 aa13.74□□□□□ -0.21
TOP1MT-217ENST00000523417 ASB16Q96NS5 453 aa13.74□□□□□ -0.21
TOP1MT-217ENST00000523417 KXD1Q9BQD3 176 aa13.74□□□□□ -0.21
TOP1MT-217ENST00000523417 LRRC3Q9BY71 257 aa13.74□□□□□ -0.21
TOP1MT-217ENST00000523417 BCO2Q9BYV7 579 aa13.74□□□□□ -0.21
TOP1MT-217ENST00000523417 FOXQ1Q9C009 403 aa13.74□□□□□ -0.21
TOP1MT-217ENST00000523417 LTB4R2Q9NPC1 389 aa13.74□□□□□ -0.21
TOP1MT-217ENST00000523417 C2CD2Q9Y426 696 aa13.74□□□□□ -0.21
TOP1MT-217ENST00000523417 MTF2Q9Y483 593 aaPredicted RBP13.74□□□□□ -0.21
TOP1MT-217ENST00000523417 ASB3Q9Y575 518 aa13.74□□□□□ -0.21
TOP1MT-217ENST00000523417 VNN2O95498 520 aa13.73□□□□□ -0.21
TOP1MT-217ENST00000523417 CYP11A1P05108 521 aa13.73□□□□□ -0.21
TOP1MT-217ENST00000523417 MATR3P43243 847 aaKnown RBP eCLIP13.73□□□□□ -0.21
TOP1MT-217ENST00000523417 TWF1Q12792 350 aa13.73□□□□□ -0.21
TOP1MT-217ENST00000523417 PLD1Q13393 1074 aa13.73□□□□□ -0.21
TOP1MT-217ENST00000523417 CENPPQ6IPU0 288 aa13.73□□□□□ -0.21
TOP1MT-217ENST00000523417 ZC3H14Q6PJT7 736 aaKnown RBP13.73□□□□□ -0.21
TOP1MT-217ENST00000523417 ZNF852Q6ZMS4 543 aa13.73□□□□□ -0.21
TOP1MT-217ENST00000523417 PDZD4Q76G19 769 aaPredicted RBP13.73□□□□□ -0.21
TOP1MT-217ENST00000523417 ZNF687Q8N1G0 1237 aa13.73□□□□□ -0.21
TOP1MT-217ENST00000523417 SMARCD2Q92925 531 aa13.73□□□□□ -0.21
TOP1MT-217ENST00000523417 HVCN1Q96D96 273 aa13.73□□□□□ -0.21
TOP1MT-217ENST00000523417 MSTO1Q9BUK6 570 aa13.73□□□□□ -0.21
TOP1MT-217ENST00000523417 TRMT61BQ9BVS5 477 aaKnown RBP13.73□□□□□ -0.21
TOP1MT-217ENST00000523417 STK17AQ9UEE5 414 aa13.73□□□□□ -0.21
TOP1MT-217ENST00000523417 MRPS17Q9Y2R5 130 aaKnown RBP13.73□□□□□ -0.21
TOP1MT-217ENST00000523417 SRPRBQ9Y5M8 271 aaKnown RBP13.73□□□□□ -0.21
TOP1MT-217ENST00000523417 K7ENM7 598 aa13.72□□□□□ -0.21
TOP1MT-217ENST00000523417 MAN2B1O00754 1011 aa13.72□□□□□ -0.21
TOP1MT-217ENST00000523417 PSMC3P17980 439 aa13.72□□□□□ -0.21
TOP1MT-217ENST00000523417 WEE1P30291 646 aa13.72□□□□□ -0.21
TOP1MT-217ENST00000523417 NMT1P30419 496 aaKnown RBP13.72□□□□□ -0.21
TOP1MT-217ENST00000523417 SPAG1Q07617 926 aa13.72□□□□□ -0.21
TOP1MT-217ENST00000523417 SMARCB1Q12824 385 aa13.72□□□□□ -0.21
TOP1MT-217ENST00000523417 POSTNQ15063 836 aa13.72□□□□□ -0.21
TOP1MT-217ENST00000523417 SPECC1Q5M775 1068 aa13.72□□□□□ -0.21
TOP1MT-217ENST00000523417 C9orf57Q5W0N0 161 aa13.72□□□□□ -0.21
TOP1MT-217ENST00000523417 OVOS1Q6IE37 1185 aa13.72□□□□□ -0.21
TOP1MT-217ENST00000523417 DSTYKQ6XUX3 929 aa13.72□□□□□ -0.21
TOP1MT-217ENST00000523417 USP37Q86T82 979 aa13.72□□□□□ -0.21
TOP1MT-217ENST00000523417 MFSD6LQ8IWD5 586 aa13.72□□□□□ -0.21
TOP1MT-217ENST00000523417 HS6ST3Q8IZP7 471 aa13.72□□□□□ -0.21
TOP1MT-217ENST00000523417 KRI1Q8N9T8 703 aaKnown RBP13.72□□□□□ -0.21
TOP1MT-217ENST00000523417 DEPDC1BQ8WUY9 529 aa13.72□□□□□ -0.21
TOP1MT-217ENST00000523417 IRF7Q92985 503 aa13.72□□□□□ -0.21
TOP1MT-217ENST00000523417 SENP8Q96LD8 212 aa13.72□□□□□ -0.21
TOP1MT-217ENST00000523417 ZSWIM3Q96MP5 696 aa13.72□□□□□ -0.21
TOP1MT-217ENST00000523417 SEL1LQ9UBV2 794 aa13.72□□□□□ -0.21
TOP1MT-217ENST00000523417 CCDC39Q9UFE4 941 aa13.72□□□□□ -0.21
TOP1MT-217ENST00000523417 GVINP1Q7Z2Y8 2422 aa13.72□□□□□ -0.21
TOP1MT-217ENST00000523417 ANKRD63C9JTQ0 380 aa13.71□□□□□ -0.21
TOP1MT-217ENST00000523417 NRG2O14511 850 aaPredicted RBP13.71□□□□□ -0.21
TOP1MT-217ENST00000523417 SPTLC1O15269 473 aa13.71□□□□□ -0.21
TOP1MT-217ENST00000523417 LRRN2O75325 713 aa13.71□□□□□ -0.21
TOP1MT-217ENST00000523417 TBCAO75347 108 aaKnown RBP13.71□□□□□ -0.21
TOP1MT-217ENST00000523417 PPP1R37O75864 691 aa13.71□□□□□ -0.21
TOP1MT-217ENST00000523417 KRT18P05783 430 aaKnown RBP13.71□□□□□ -0.21
TOP1MT-217ENST00000523417 CPB1P15086 417 aa13.71□□□□□ -0.21
TOP1MT-217ENST00000523417 EPHB3P54753 998 aa13.71□□□□□ -0.21
TOP1MT-217ENST00000523417 DUSP4Q13115 394 aa13.71□□□□□ -0.21
TOP1MT-217ENST00000523417 DHX8Q14562 1220 aaKnown RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms