RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 C19orf47Q8N9M1 422 aaKnown RBP7.3□□□□□ -1.24
VPS13B-211ENST00000522802 TDRD5Q8NAT2 981 aaKnown RBP7.3□□□□□ -1.24
VPS13B-211ENST00000522802 COLGALT1Q8NBJ5 622 aa7.3□□□□□ -1.24
VPS13B-211ENST00000522802 RNF141Q8WVD5 230 aa7.3□□□□□ -1.24
VPS13B-211ENST00000522802 RIN2Q8WYP3 895 aaPredicted RBP7.3□□□□□ -1.24
VPS13B-211ENST00000522802 Q96M66 194 aa7.3□□□□□ -1.24
VPS13B-211ENST00000522802 GPR20Q99678 358 aa7.3□□□□□ -1.24
VPS13B-211ENST00000522802 TCF25Q9BQ70 676 aa7.3□□□□□ -1.24
VPS13B-211ENST00000522802 MLXIPQ9HAP2 919 aa7.3□□□□□ -1.24
VPS13B-211ENST00000522802 ERVK-5Q9HDB9 667 aa7.3□□□□□ -1.24
VPS13B-211ENST00000522802 ANAPC4Q9UJX5 808 aa7.3□□□□□ -1.24
VPS13B-211ENST00000522802 CAPN6Q9Y6Q1 641 aa7.3□□□□□ -1.24
VPS13B-211ENST00000522802 COL4A3Q01955 1670 aa7.3□□□□□ -1.24
VPS13B-211ENST00000522802 PATJQ8NI35 1801 aa7.29□□□□□ -1.24
VPS13B-211ENST00000522802 CEP295Q9C0D2 2601 aa7.29□□□□□ -1.24
VPS13B-211ENST00000522802 FSD2A1L4K1 749 aa7.29□□□□□ -1.24
VPS13B-211ENST00000522802 CBX7O95931 251 aa7.29□□□□□ -1.24
VPS13B-211ENST00000522802 GNAT1P11488 350 aa7.29□□□□□ -1.24
VPS13B-211ENST00000522802 SPINK2P20155 84 aa7.29□□□□□ -1.24
VPS13B-211ENST00000522802 MARK3P27448 753 aa7.29□□□□□ -1.24
VPS13B-211ENST00000522802 PBX3P40426 434 aa7.29□□□□□ -1.24
VPS13B-211ENST00000522802 MRPS6P82932 125 aaKnown RBP7.29□□□□□ -1.24
VPS13B-211ENST00000522802 GHRHRQ02643 423 aa7.29□□□□□ -1.24
VPS13B-211ENST00000522802 UBE3AQ05086 875 aa7.29□□□□□ -1.24
VPS13B-211ENST00000522802 TMEM62Q0P6H9 643 aa7.29□□□□□ -1.24
VPS13B-211ENST00000522802 IFI16Q16666 785 aaKnown RBP7.29□□□□□ -1.24
VPS13B-211ENST00000522802 MARCH8Q5T0T0 291 aa7.29□□□□□ -1.24
VPS13B-211ENST00000522802 GPATCH4Q5T3I0 446 aaKnown RBP7.29□□□□□ -1.24
VPS13B-211ENST00000522802 UNC5AQ6ZN44 842 aa7.29□□□□□ -1.24
VPS13B-211ENST00000522802 TBC1D10CQ8IV04 446 aa7.29□□□□□ -1.24
VPS13B-211ENST00000522802 THNSL1Q8IYQ7 743 aa7.29□□□□□ -1.24
VPS13B-211ENST00000522802 MFSD4AQ8N468 514 aa7.29□□□□□ -1.24
VPS13B-211ENST00000522802 DNAJB3Q8WWF6 145 aa7.29□□□□□ -1.24
VPS13B-211ENST00000522802 ASPNQ9BXN1 380 aa7.29□□□□□ -1.24
VPS13B-211ENST00000522802 MAF1Q9H063 256 aa7.29□□□□□ -1.24
VPS13B-211ENST00000522802 TMX1Q9H3N1 280 aa7.29□□□□□ -1.24
VPS13B-211ENST00000522802 ZBTB40Q9NUA8 1239 aa7.29□□□□□ -1.24
VPS13B-211ENST00000522802 TMEM260Q9NX78 707 aa7.29□□□□□ -1.24
VPS13B-211ENST00000522802 TUBE1Q9UJT0 475 aa7.29□□□□□ -1.24
VPS13B-211ENST00000522802 ZNF215Q9UL58 517 aaPredicted RBP7.29□□□□□ -1.24
VPS13B-211ENST00000522802 SNX11Q9Y5W9 270 aa7.29□□□□□ -1.24
VPS13B-211ENST00000522802 HCFC2Q9Y5Z7 792 aa7.29□□□□□ -1.24
VPS13B-211ENST00000522802 NEDD4P46934 1319 aa7.28□□□□□ -1.24
VPS13B-211ENST00000522802 NRCAMQ92823 1304 aa7.28□□□□□ -1.24
VPS13B-211ENST00000522802 MBLAC1A4D2B0 266 aaPredicted RBP7.28□□□□□ -1.24
VPS13B-211ENST00000522802 TBKBP1A7MCY6 615 aa7.28□□□□□ -1.24
VPS13B-211ENST00000522802 NARSO43776 548 aaKnown RBP7.28□□□□□ -1.24
VPS13B-211ENST00000522802 MGEA5O60502 916 aa7.28□□□□□ -1.24
VPS13B-211ENST00000522802 PRNPP04156 253 aa7.28□□□□□ -1.24
VPS13B-211ENST00000522802 SSBP05455 408 aaKnown RBP eCLIP7.28□□□□□ -1.24
VPS13B-211ENST00000522802 FGFR1P11362 822 aa7.28□□□□□ -1.24
VPS13B-211ENST00000522802 HOXB8P17481 243 aaPredicted RBP7.28□□□□□ -1.24
VPS13B-211ENST00000522802 CCND2P30279 289 aa7.28□□□□□ -1.24
VPS13B-211ENST00000522802 HAND2P61296 217 aa7.28□□□□□ -1.24
VPS13B-211ENST00000522802 PPFIA1Q13136 1202 aa7.28□□□□□ -1.24
VPS13B-211ENST00000522802 TMEM266Q2M3C6 531 aa7.28□□□□□ -1.24
VPS13B-211ENST00000522802 RARS2Q5T160 578 aaKnown RBP7.28□□□□□ -1.24
VPS13B-211ENST00000522802 SPOUT1Q5T280 376 aaKnown RBP7.28□□□□□ -1.24
VPS13B-211ENST00000522802 TAF2Q6P1X5 1199 aa7.28□□□□□ -1.24
VPS13B-211ENST00000522802 KCNV1Q6PIU1 500 aa7.28□□□□□ -1.24
VPS13B-211ENST00000522802 METTL7BQ6UX53 244 aa7.28□□□□□ -1.24
VPS13B-211ENST00000522802 STOX1Q6ZVD7 989 aa7.28□□□□□ -1.24
VPS13B-211ENST00000522802 VSIG10LQ86VR7 867 aa7.28□□□□□ -1.24
VPS13B-211ENST00000522802 ZDHHC14Q8IZN3 488 aa7.28□□□□□ -1.24
VPS13B-211ENST00000522802 C12orf76Q8N812 135 aaPredicted RBP7.28□□□□□ -1.24
VPS13B-211ENST00000522802 PIWIL2Q8TC59 973 aaKnown RBP7.28□□□□□ -1.24
VPS13B-211ENST00000522802 RUBCNQ92622 972 aa7.28□□□□□ -1.24
VPS13B-211ENST00000522802 ANAPC16Q96DE5 110 aa7.28□□□□□ -1.24
VPS13B-211ENST00000522802 DHRS1Q96LJ7 313 aa7.28□□□□□ -1.24
VPS13B-211ENST00000522802 FAM49AQ9H0Q0 323 aaPredicted RBP7.28□□□□□ -1.24
VPS13B-211ENST00000522802 ADAM7Q9H2U9 754 aa7.28□□□□□ -1.24
VPS13B-211ENST00000522802 JMJD4Q9H9V9 463 aa7.28□□□□□ -1.24
VPS13B-211ENST00000522802 ENTPD7Q9NQZ7 604 aa7.28□□□□□ -1.24
VPS13B-211ENST00000522802 TCP11L1Q9NUJ3 509 aa7.28□□□□□ -1.24
VPS13B-211ENST00000522802 MRPL11Q9Y3B7 192 aaKnown RBP7.28□□□□□ -1.24
VPS13B-211ENST00000522802 PCDHB12Q9Y5F1 795 aa7.28□□□□□ -1.24
VPS13B-211ENST00000522802 ST14Q9Y5Y6 855 aa7.28□□□□□ -1.24
VPS13B-211ENST00000522802 IGSF9BQ9UPX0 1349 aa7.27□□□□□ -1.24
VPS13B-211ENST00000522802 A0A1W2PQH9 124 aa7.27□□□□□ -1.25
VPS13B-211ENST00000522802 DHX16O60231 1041 aaKnown RBP7.27□□□□□ -1.25
VPS13B-211ENST00000522802 CLEC3AO75596 197 aa7.27□□□□□ -1.25
VPS13B-211ENST00000522802 STAG3L1P0CL83 205 aa7.27□□□□□ -1.25
VPS13B-211ENST00000522802 TGFB3P10600 412 aa7.27□□□□□ -1.25
VPS13B-211ENST00000522802 ITIH2P19823 946 aa7.27□□□□□ -1.25
VPS13B-211ENST00000522802 ETFBP38117 255 aa7.27□□□□□ -1.25
VPS13B-211ENST00000522802 IGBP1P78318 339 aa7.27□□□□□ -1.25
VPS13B-211ENST00000522802 MRPS9P82933 396 aaKnown RBP7.27□□□□□ -1.25
VPS13B-211ENST00000522802 ITIH3Q06033 890 aa7.27□□□□□ -1.25
VPS13B-211ENST00000522802 TNK2Q07912 1038 aa7.27□□□□□ -1.25
VPS13B-211ENST00000522802 FAM102BQ5T8I3 360 aa7.27□□□□□ -1.25
VPS13B-211ENST00000522802 SUMF1Q8NBK3 374 aa7.27□□□□□ -1.25
VPS13B-211ENST00000522802 PI4K2BQ8TCG2 481 aa7.27□□□□□ -1.25
VPS13B-211ENST00000522802 OTUD7AQ8TE49 926 aaPredicted RBP7.27□□□□□ -1.25
VPS13B-211ENST00000522802 MRPS27Q92552 414 aaKnown RBP7.27□□□□□ -1.25
VPS13B-211ENST00000522802 CASP10Q92851 521 aa7.27□□□□□ -1.25
VPS13B-211ENST00000522802 GPATCH3Q96I76 525 aa7.27□□□□□ -1.25
VPS13B-211ENST00000522802 SLC6A18Q96N87 628 aa7.27□□□□□ -1.25
VPS13B-211ENST00000522802 NECTIN4Q96NY8 510 aa7.27□□□□□ -1.25
VPS13B-211ENST00000522802 INPP4AQ96PE3 977 aaPredicted RBP7.27□□□□□ -1.25
VPS13B-211ENST00000522802 SEMA4AQ9H3S1 761 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms