RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 IL23AQ9NPF7 189 aa14.03□□□□□ -0.16
CPNE3-205ENST00000522240 RNF19AQ9NV58 838 aa14.03□□□□□ -0.16
CPNE3-205ENST00000522240 AJAP1Q9UKB5 411 aaPredicted RBP14.03□□□□□ -0.16
CPNE3-205ENST00000522240 RBAK-RBAKDNI3L0D1 243 aa14.02□□□□□ -0.17
CPNE3-205ENST00000522240 LRRN2O75325 713 aa14.02□□□□□ -0.17
CPNE3-205ENST00000522240 P4HA1P13674 534 aa14.02□□□□□ -0.17
CPNE3-205ENST00000522240 PAX3P23760 479 aa14.02□□□□□ -0.17
CPNE3-205ENST00000522240 STAT1P42224 750 aa14.02□□□□□ -0.17
CPNE3-205ENST00000522240 GUCY2FP51841 1108 aa14.02□□□□□ -0.17
CPNE3-205ENST00000522240 CDK17Q00537 523 aa14.02□□□□□ -0.17
CPNE3-205ENST00000522240 SOX4Q06945 474 aaPredicted RBP14.02□□□□□ -0.17
CPNE3-205ENST00000522240 GOLGA8FQ08AF8 430 aa14.02□□□□□ -0.17
CPNE3-205ENST00000522240 GOLGA8DPQ0D2H9 430 aa14.02□□□□□ -0.17
CPNE3-205ENST00000522240 LRMPQ12912 555 aa14.02□□□□□ -0.17
CPNE3-205ENST00000522240 MYO1EQ12965 1108 aa14.02□□□□□ -0.17
CPNE3-205ENST00000522240 DRAP1Q14919 205 aaPredicted RBP14.02□□□□□ -0.17
CPNE3-205ENST00000522240 ZNF667Q5HYK9 610 aa14.02□□□□□ -0.17
CPNE3-205ENST00000522240 NOMO2Q5JPE7 1267 aa14.02□□□□□ -0.17
CPNE3-205ENST00000522240 CLLU1OSQ5K130 101 aa14.02□□□□□ -0.17
CPNE3-205ENST00000522240 SFMBT2Q5VUG0 894 aa14.02□□□□□ -0.17
CPNE3-205ENST00000522240 TMEM139Q8IV31 216 aa14.02□□□□□ -0.17
CPNE3-205ENST00000522240 CRIPAKQ8N1N5 446 aa14.02□□□□□ -0.17
CPNE3-205ENST00000522240 SHC3Q92529 594 aa14.02□□□□□ -0.17
CPNE3-205ENST00000522240 KREMEN1Q96MU8 473 aa14.02□□□□□ -0.17
CPNE3-205ENST00000522240 UROC1Q96N76 676 aa14.02□□□□□ -0.17
CPNE3-205ENST00000522240 GPR88Q9GZN0 384 aa14.02□□□□□ -0.17
CPNE3-205ENST00000522240 UBE2TQ9NPD8 197 aaPredicted RBP14.02□□□□□ -0.17
CPNE3-205ENST00000522240 ZNHIT6Q9NWK9 470 aaKnown RBP14.02□□□□□ -0.17
CPNE3-205ENST00000522240 AIPL1Q9NZN9 384 aa14.02□□□□□ -0.17
CPNE3-205ENST00000522240 KANSL3Q9P2N6 904 aa14.02□□□□□ -0.17
CPNE3-205ENST00000522240 AGAP1Q9UPQ3 857 aa14.02□□□□□ -0.17
CPNE3-205ENST00000522240 NUB1Q9Y5A7 615 aa14.02□□□□□ -0.17
CPNE3-205ENST00000522240 PCDHB7Q9Y5E2 793 aa14.02□□□□□ -0.17
CPNE3-205ENST00000522240 PIRO00625 290 aa14.01□□□□□ -0.17
CPNE3-205ENST00000522240 EVI5O60447 810 aa14.01□□□□□ -0.17
CPNE3-205ENST00000522240 FERP16591 822 aa14.01□□□□□ -0.17
CPNE3-205ENST00000522240 RPL9P32969 192 aaKnown RBP14.01□□□□□ -0.17
CPNE3-205ENST00000522240 SOX5P35711 763 aa14.01□□□□□ -0.17
CPNE3-205ENST00000522240 YWHAEP62258 255 aaKnown RBP14.01□□□□□ -0.17
CPNE3-205ENST00000522240 CCZ1BP86790 482 aa14.01□□□□□ -0.17
CPNE3-205ENST00000522240 CCZ1P86791 482 aaPredicted RBP14.01□□□□□ -0.17
CPNE3-205ENST00000522240 FPGSQ05932 587 aa14.01□□□□□ -0.17
CPNE3-205ENST00000522240 TUSC3Q13454 348 aa14.01□□□□□ -0.17
CPNE3-205ENST00000522240 ASIC2Q16515 512 aa14.01□□□□□ -0.17
CPNE3-205ENST00000522240 SV2CQ496J9 727 aa14.01□□□□□ -0.17
CPNE3-205ENST00000522240 E4F1Q66K89 784 aaPredicted RBP14.01□□□□□ -0.17
CPNE3-205ENST00000522240 SPOPLQ6IQ16 392 aa14.01□□□□□ -0.17
CPNE3-205ENST00000522240 C7orf61Q8IZ16 206 aa14.01□□□□□ -0.17
CPNE3-205ENST00000522240 TATDN2Q93075 761 aa14.01□□□□□ -0.17
CPNE3-205ENST00000522240 HPDLQ96IR7 371 aa14.01□□□□□ -0.17
CPNE3-205ENST00000522240 BAG1Q99933 345 aaPredicted RBP14.01□□□□□ -0.17
CPNE3-205ENST00000522240 MRPL9Q9BYD2 267 aaKnown RBP14.01□□□□□ -0.17
CPNE3-205ENST00000522240 BCO2Q9BYV7 579 aa14.01□□□□□ -0.17
CPNE3-205ENST00000522240 KCNF1Q9H3M0 494 aa14.01□□□□□ -0.17
CPNE3-205ENST00000522240 MIOSQ9NXC5 875 aa14.01□□□□□ -0.17
CPNE3-205ENST00000522240 LRFN2Q9ULH4 789 aa14.01□□□□□ -0.17
CPNE3-205ENST00000522240 INPP5FQ9Y2H2 1132 aa14.01□□□□□ -0.17
CPNE3-205ENST00000522240 CLSTN1O94985 981 aa14□□□□□ -0.17
CPNE3-205ENST00000522240 AMHP03971 560 aa14□□□□□ -0.17
CPNE3-205ENST00000522240 CCDC172P0C7W6 258 aa14□□□□□ -0.17
CPNE3-205ENST00000522240 FGFR1P11362 822 aa14□□□□□ -0.17
CPNE3-205ENST00000522240 IBSPP21815 317 aaPredicted RBP14□□□□□ -0.17
CPNE3-205ENST00000522240 PRKCIP41743 596 aa14□□□□□ -0.17
CPNE3-205ENST00000522240 ASPAP45381 313 aa14□□□□□ -0.17
CPNE3-205ENST00000522240 KCNJ6P48051 423 aa14□□□□□ -0.17
CPNE3-205ENST00000522240 TAF6P49848 677 aa14□□□□□ -0.17
CPNE3-205ENST00000522240 AFF1P51825 1210 aaKnown RBP14□□□□□ -0.17
CPNE3-205ENST00000522240 TNNC1P63316 161 aa14□□□□□ -0.17
CPNE3-205ENST00000522240 DSC1Q08554 894 aa14□□□□□ -0.17
CPNE3-205ENST00000522240 ARHGAP44Q17R89 818 aa14□□□□□ -0.17
CPNE3-205ENST00000522240 PSRC1Q6PGN9 363 aaPredicted RBP14□□□□□ -0.17
CPNE3-205ENST00000522240 WDR59Q6PJI9 974 aa14□□□□□ -0.17
CPNE3-205ENST00000522240 CYP26C1Q6V0L0 522 aa14□□□□□ -0.17
CPNE3-205ENST00000522240 TMTC1Q8IUR5 882 aa14□□□□□ -0.17
CPNE3-205ENST00000522240 ABI1Q8IZP0 508 aa14□□□□□ -0.17
CPNE3-205ENST00000522240 TTC39CQ8N584 583 aa14□□□□□ -0.17
CPNE3-205ENST00000522240 UBR7Q8N806 425 aa14□□□□□ -0.17
CPNE3-205ENST00000522240 KAT5Q92993 513 aa14□□□□□ -0.17
CPNE3-205ENST00000522240 CYP3A43Q9HB55 503 aa14□□□□□ -0.17
CPNE3-205ENST00000522240 GOLGA2P5Q9HBQ8 144 aa14□□□□□ -0.17
CPNE3-205ENST00000522240 SLC24A3Q9HC58 644 aa14□□□□□ -0.17
CPNE3-205ENST00000522240 COL6A3P12111 3177 aa14□□□□□ -0.17
CPNE3-205ENST00000522240 COL4A6Q14031 1691 aa14□□□□□ -0.17
CPNE3-205ENST00000522240 FNDC1Q4ZHG4 1894 aaPredicted RBP13.99□□□□□ -0.17
CPNE3-205ENST00000522240 SSU72P8A0A1W2PR75 194 aa13.99□□□□□ -0.17
CPNE3-205ENST00000522240 PODXLO00592 558 aa13.99□□□□□ -0.17
CPNE3-205ENST00000522240 PPEF2O14830 753 aa13.99□□□□□ -0.17
CPNE3-205ENST00000522240 ARHGAP6O43182 974 aa13.99□□□□□ -0.17
CPNE3-205ENST00000522240 POMCP01189 267 aa13.99□□□□□ -0.17
CPNE3-205ENST00000522240 SERPING1P05155 500 aa13.99□□□□□ -0.17
CPNE3-205ENST00000522240 ACO1P21399 889 aaKnown RBP13.99□□□□□ -0.17
CPNE3-205ENST00000522240 ANXA13P27216 316 aa13.99□□□□□ -0.17
CPNE3-205ENST00000522240 DSG2Q14126 1118 aa13.99□□□□□ -0.17
CPNE3-205ENST00000522240 WDR72Q3MJ13 1102 aa13.99□□□□□ -0.17
CPNE3-205ENST00000522240 SCARA3Q6AZY7 606 aa13.99□□□□□ -0.17
CPNE3-205ENST00000522240 FAM71AQ8IYT1 594 aa13.99□□□□□ -0.17
CPNE3-205ENST00000522240 TMEM130Q8N3G9 435 aa13.99□□□□□ -0.17
CPNE3-205ENST00000522240 PDCD7Q8N8D1 485 aaKnown RBP13.99□□□□□ -0.17
CPNE3-205ENST00000522240 CASD1Q96PB1 797 aa13.99□□□□□ -0.17
CPNE3-205ENST00000522240 ARID3AQ99856 593 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms