RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 ITGB1P05556 798 aa14.36□□□□□ -0.11
CLK4-210ENST00000522136 TPM1P09493 284 aa14.36□□□□□ -0.11
CLK4-210ENST00000522136 WEE2P0C1S8 567 aa14.36□□□□□ -0.11
CLK4-210ENST00000522136 PBX3P40426 434 aa14.36□□□□□ -0.11
CLK4-210ENST00000522136 ASPAP45381 313 aa14.36□□□□□ -0.11
CLK4-210ENST00000522136 RAP1GAPP47736 663 aa14.36□□□□□ -0.11
CLK4-210ENST00000522136 OR1G1P47890 313 aa14.36□□□□□ -0.11
CLK4-210ENST00000522136 CDH8P55286 799 aa14.36□□□□□ -0.11
CLK4-210ENST00000522136 LILRA4P59901 499 aa14.36□□□□□ -0.11
CLK4-210ENST00000522136 ZBED6P86452 979 aa14.36□□□□□ -0.11
CLK4-210ENST00000522136 MYO1EQ12965 1108 aa14.36□□□□□ -0.11
CLK4-210ENST00000522136 CUL2Q13617 745 aa14.36□□□□□ -0.11
CLK4-210ENST00000522136 C9orf50Q5SZB4 431 aa14.36□□□□□ -0.11
CLK4-210ENST00000522136 E4F1Q66K89 784 aaPredicted RBP14.36□□□□□ -0.11
CLK4-210ENST00000522136 PDXDC1Q6P996 788 aa14.36□□□□□ -0.11
CLK4-210ENST00000522136 CD300LGQ6UXG3 332 aa14.36□□□□□ -0.11
CLK4-210ENST00000522136 TAF4BQ92750 862 aa14.36□□□□□ -0.11
CLK4-210ENST00000522136 ZNF689Q96CS4 500 aaPredicted RBP14.36□□□□□ -0.11
CLK4-210ENST00000522136 STK33Q9BYT3 514 aa14.36□□□□□ -0.11
CLK4-210ENST00000522136 NIF3L1Q9GZT8 377 aa14.36□□□□□ -0.11
CLK4-210ENST00000522136 SDCBP2Q9H190 292 aa14.36□□□□□ -0.11
CLK4-210ENST00000522136 VRTNQ9H8Y1 702 aa14.36□□□□□ -0.11
CLK4-210ENST00000522136 FBXL5Q9UKA1 691 aa14.36□□□□□ -0.11
CLK4-210ENST00000522136 SNX9Q9Y5X1 595 aa14.36□□□□□ -0.11
CLK4-210ENST00000522136 B3GAT3O94766 335 aa14.36□□□□□ -0.11
CLK4-210ENST00000522136 RPL9P32969 192 aaKnown RBP14.36□□□□□ -0.11
CLK4-210ENST00000522136 DEKP35659 375 aaKnown RBP14.36□□□□□ -0.11
CLK4-210ENST00000522136 TAF6P49848 677 aa14.36□□□□□ -0.11
CLK4-210ENST00000522136 MFAP3P55082 362 aa14.36□□□□□ -0.11
CLK4-210ENST00000522136 JAM2P57087 298 aa14.36□□□□□ -0.11
CLK4-210ENST00000522136 SPAG5Q96R06 1193 aa14.36□□□□□ -0.11
CLK4-210ENST00000522136 MMS19Q96T76 1030 aa14.36□□□□□ -0.11
CLK4-210ENST00000522136 EDEM3Q9BZQ6 932 aa14.36□□□□□ -0.11
CLK4-210ENST00000522136 SMYD3Q9H7B4 428 aa14.36□□□□□ -0.11
CLK4-210ENST00000522136 PRG3Q9Y2Y8 225 aaPredicted RBP14.36□□□□□ -0.11
CLK4-210ENST00000522136 SLC4A7Q9Y6M7 1214 aa14.36□□□□□ -0.11
CLK4-210ENST00000522136 GOLGA6L6A8MZA4 724 aa14.35□□□□□ -0.11
CLK4-210ENST00000522136 KPNA7A9QM74 516 aa14.35□□□□□ -0.11
CLK4-210ENST00000522136 NT5C1B-RDH14C9J2C7 533 aa14.35□□□□□ -0.11
CLK4-210ENST00000522136 I3L4J1 428 aa14.35□□□□□ -0.11
CLK4-210ENST00000522136 STAU1O95793 577 aaKnown RBP14.35□□□□□ -0.11
CLK4-210ENST00000522136 GCNT1Q02742 428 aa14.35□□□□□ -0.11
CLK4-210ENST00000522136 LRRC43Q8N309 656 aa14.35□□□□□ -0.11
CLK4-210ENST00000522136 ZNF397Q8NF99 534 aaPredicted RBP14.35□□□□□ -0.11
CLK4-210ENST00000522136 IQCDQ96DY2 449 aa14.35□□□□□ -0.11
CLK4-210ENST00000522136 DDX27Q96GQ7 796 aaKnown RBP14.35□□□□□ -0.11
CLK4-210ENST00000522136 ZNF560Q96MR9 790 aa14.35□□□□□ -0.11
CLK4-210ENST00000522136 YME1L1Q96TA2 773 aa14.35□□□□□ -0.11
CLK4-210ENST00000522136 MRPL9Q9BYD2 267 aaKnown RBP14.35□□□□□ -0.11
CLK4-210ENST00000522136 RC3H2Q9HBD1 1191 aaKnown RBP14.35□□□□□ -0.11
CLK4-210ENST00000522136 ABHD10Q9NUJ1 306 aa14.35□□□□□ -0.11
CLK4-210ENST00000522136 F8VZ95 297 aa14.34□□□□□ -0.11
CLK4-210ENST00000522136 NRP1O14786 923 aa14.34□□□□□ -0.11
CLK4-210ENST00000522136 KIF4AO95239 1232 aa14.34□□□□□ -0.11
CLK4-210ENST00000522136 CD58P19256 250 aa14.34□□□□□ -0.11
CLK4-210ENST00000522136 USP8P40818 1118 aa14.34□□□□□ -0.11
CLK4-210ENST00000522136 PNPLA4P41247 253 aa14.34□□□□□ -0.11
CLK4-210ENST00000522136 BRCC3P46736 316 aa14.34□□□□□ -0.11
CLK4-210ENST00000522136 SLC11A1P49279 550 aa14.34□□□□□ -0.11
CLK4-210ENST00000522136 TNNC1P63316 161 aa14.34□□□□□ -0.11
CLK4-210ENST00000522136 ARID5AQ03989 594 aa14.34□□□□□ -0.11
CLK4-210ENST00000522136 SHHQ15465 462 aa14.34□□□□□ -0.11
CLK4-210ENST00000522136 SV2CQ496J9 727 aa14.34□□□□□ -0.11
CLK4-210ENST00000522136 CNGA4Q8IV77 575 aa14.34□□□□□ -0.11
CLK4-210ENST00000522136 OR8K1Q8NGG5 319 aa14.34□□□□□ -0.11
CLK4-210ENST00000522136 UROC1Q96N76 676 aa14.34□□□□□ -0.11
CLK4-210ENST00000522136 ZNF830Q96NB3 372 aaPredicted RBP14.34□□□□□ -0.11
CLK4-210ENST00000522136 BCO2Q9BYV7 579 aa14.34□□□□□ -0.11
CLK4-210ENST00000522136 CWH43Q9H720 699 aa14.34□□□□□ -0.11
CLK4-210ENST00000522136 H0YGN5 161 aa14.34□□□□□ -0.11
CLK4-210ENST00000522136 GFPT2O94808 682 aa14.34□□□□□ -0.11
CLK4-210ENST00000522136 GJB5O95377 273 aa14.34□□□□□ -0.11
CLK4-210ENST00000522136 CALCAP01258 141 aa14.34□□□□□ -0.11
CLK4-210ENST00000522136 ATP2A2P16615 1042 aaKnown RBP14.34□□□□□ -0.11
CLK4-210ENST00000522136 ACO1P21399 889 aaKnown RBP14.34□□□□□ -0.11
CLK4-210ENST00000522136 RFX1P22670 979 aa14.34□□□□□ -0.11
CLK4-210ENST00000522136 TBXAS1P24557 533 aaPredicted RBP14.34□□□□□ -0.11
CLK4-210ENST00000522136 GSDMDP57764 484 aa14.34□□□□□ -0.11
CLK4-210ENST00000522136 BTG3Q14201 252 aaPredicted RBP14.34□□□□□ -0.11
CLK4-210ENST00000522136 SOWAHAQ2M3V2 549 aa14.34□□□□□ -0.11
CLK4-210ENST00000522136 TIGD5Q53EQ6 642 aa14.34□□□□□ -0.11
CLK4-210ENST00000522136 DCLRE1AQ6PJP8 1040 aa14.34□□□□□ -0.11
CLK4-210ENST00000522136 SHC3Q92529 594 aa14.34□□□□□ -0.11
CLK4-210ENST00000522136 DNAJC7Q99615 494 aa14.34□□□□□ -0.11
CLK4-210ENST00000522136 ZBED2Q9BTP6 218 aa14.34□□□□□ -0.11
CLK4-210ENST00000522136 GDAP2Q9NXN4 497 aa14.34□□□□□ -0.11
CLK4-210ENST00000522136 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.34□□□□□ -0.11
CLK4-210ENST00000522136 ALDH2P05091 517 aa14.33□□□□□ -0.12
CLK4-210ENST00000522136 GALTP07902 379 aa14.33□□□□□ -0.12
CLK4-210ENST00000522136 SOX5P35711 763 aa14.33□□□□□ -0.12
CLK4-210ENST00000522136 STAT1P42224 750 aa14.33□□□□□ -0.12
CLK4-210ENST00000522136 BCAR1P56945 870 aa14.33□□□□□ -0.12
CLK4-210ENST00000522136 RASIP1Q5U651 963 aa14.33□□□□□ -0.12
CLK4-210ENST00000522136 SFMBT2Q5VUG0 894 aa14.33□□□□□ -0.12
CLK4-210ENST00000522136 HERC6Q8IVU3 1022 aa14.33□□□□□ -0.12
CLK4-210ENST00000522136 UBR7Q8N806 425 aa14.33□□□□□ -0.12
CLK4-210ENST00000522136 SENP8Q96LD8 212 aa14.33□□□□□ -0.12
CLK4-210ENST00000522136 MRPL45Q9BRJ2 306 aaKnown RBP14.33□□□□□ -0.12
CLK4-210ENST00000522136 ACP6Q9NPH0 428 aa14.33□□□□□ -0.12
CLK4-210ENST00000522136 CISHQ9NSE2 258 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms