RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 KIAA1841Q6NSI8 718 aa19.64■□□□□ 0.73
VEGFA-222ENST00000520948 TTI2Q6NXR4 508 aa19.64■□□□□ 0.73
VEGFA-222ENST00000520948 CD300LGQ6UXG3 332 aa19.64■□□□□ 0.73
VEGFA-222ENST00000520948 TMC5Q6UXY8 1006 aa19.64■□□□□ 0.73
VEGFA-222ENST00000520948 NT5DC4Q86YG4 428 aa19.64■□□□□ 0.73
VEGFA-222ENST00000520948 TDRD5Q8NAT2 981 aaKnown RBP19.64■□□□□ 0.73
VEGFA-222ENST00000520948 SLC22A17Q8WUG5 538 aa19.64■□□□□ 0.73
VEGFA-222ENST00000520948 ATOH1Q92858 354 aaPredicted RBP19.64■□□□□ 0.73
VEGFA-222ENST00000520948 FAM212AQ96EL1 285 aa19.64■□□□□ 0.73
VEGFA-222ENST00000520948 KIF12Q96FN5 646 aa19.64■□□□□ 0.73
VEGFA-222ENST00000520948 MED15Q96RN5 788 aa19.64■□□□□ 0.73
VEGFA-222ENST00000520948 DUSP9Q99956 384 aaKnown RBP19.64■□□□□ 0.73
VEGFA-222ENST00000520948 PDE11AQ9HCR9 933 aa19.64■□□□□ 0.73
VEGFA-222ENST00000520948 DZANK1Q9NVP4 752 aa19.64■□□□□ 0.73
VEGFA-222ENST00000520948 MARCH5Q9NX47 278 aa19.64■□□□□ 0.73
VEGFA-222ENST00000520948 CACNG4Q9UBN1 327 aa19.64■□□□□ 0.73
VEGFA-222ENST00000520948 UBQLN1Q9UMX0 589 aaKnown RBP19.64■□□□□ 0.73
VEGFA-222ENST00000520948 C2orf16Q68DN1 1984 aa19.63■□□□□ 0.73
VEGFA-222ENST00000520948 TRIM49BA6NDI0 452 aa19.63■□□□□ 0.73
VEGFA-222ENST00000520948 H0Y858 1186 aa19.63■□□□□ 0.73
VEGFA-222ENST00000520948 NFICP08651 508 aa19.63■□□□□ 0.73
VEGFA-222ENST00000520948 NR2F2P24468 414 aa19.63■□□□□ 0.73
VEGFA-222ENST00000520948 RPL13P26373 211 aaKnown RBP19.63■□□□□ 0.73
VEGFA-222ENST00000520948 LRPAP1P30533 357 aa19.63■□□□□ 0.73
VEGFA-222ENST00000520948 OR1G1P47890 313 aa19.63■□□□□ 0.73
VEGFA-222ENST00000520948 CYP24A1Q07973 514 aa19.63■□□□□ 0.73
VEGFA-222ENST00000520948 PSMD6Q15008 389 aa19.63■□□□□ 0.73
VEGFA-222ENST00000520948 SURF1Q15526 300 aa19.63■□□□□ 0.73
VEGFA-222ENST00000520948 UPP1Q16831 310 aa19.63■□□□□ 0.73
VEGFA-222ENST00000520948 EFCAB13Q8IY85 973 aa19.63■□□□□ 0.73
VEGFA-222ENST00000520948 UBALD2Q8IYN6 164 aa19.63■□□□□ 0.73
VEGFA-222ENST00000520948 PLEKHO2Q8TD55 490 aa19.63■□□□□ 0.73
VEGFA-222ENST00000520948 NELFBQ8WX92 580 aa19.63■□□□□ 0.73
VEGFA-222ENST00000520948 UROC1Q96N76 676 aa19.63■□□□□ 0.73
VEGFA-222ENST00000520948 GOLGA2P5Q9HBQ8 144 aa19.63■□□□□ 0.73
VEGFA-222ENST00000520948 LIMD1Q9UGP4 676 aa19.63■□□□□ 0.73
VEGFA-222ENST00000520948 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.63■□□□□ 0.73
VEGFA-222ENST00000520948 USP34Q70CQ2 3546 aa19.63■□□□□ 0.73
VEGFA-222ENST00000520948 PLXNA3P51805 1871 aa19.62■□□□□ 0.73
VEGFA-222ENST00000520948 CASTOR2A6NHX0 329 aa19.62■□□□□ 0.73
VEGFA-222ENST00000520948 SPDYE4A6NLX3 237 aa19.62■□□□□ 0.73
VEGFA-222ENST00000520948 F8W810 466 aa19.62■□□□□ 0.73
VEGFA-222ENST00000520948 TMEM189-UBE2V1I3L0A0 370 aa19.62■□□□□ 0.73
VEGFA-222ENST00000520948 GFRA3O60609 400 aa19.62■□□□□ 0.73
VEGFA-222ENST00000520948 AKAP3O75969 853 aa19.62■□□□□ 0.73
VEGFA-222ENST00000520948 IGFBP6P24592 240 aaPredicted RBP19.62■□□□□ 0.73
VEGFA-222ENST00000520948 RPL9P32969 192 aaKnown RBP19.62■□□□□ 0.73
VEGFA-222ENST00000520948 CLCNKBP51801 687 aa19.62■□□□□ 0.73
VEGFA-222ENST00000520948 FKBP3Q00688 224 aaKnown RBP19.62■□□□□ 0.73
VEGFA-222ENST00000520948 TMEM132DQ14C87 1099 aa19.62■□□□□ 0.73
VEGFA-222ENST00000520948 PTPN14Q15678 1187 aa19.62■□□□□ 0.73
VEGFA-222ENST00000520948 ATAT1Q5SQI0 421 aa19.62■□□□□ 0.73
VEGFA-222ENST00000520948 CAVIN1Q6NZI2 390 aaKnown RBP19.62■□□□□ 0.73
VEGFA-222ENST00000520948 DCLRE1AQ6PJP8 1040 aa19.62■□□□□ 0.73
VEGFA-222ENST00000520948 RNF168Q8IYW5 571 aaPredicted RBP19.62■□□□□ 0.73
VEGFA-222ENST00000520948 TMEM130Q8N3G9 435 aa19.62■□□□□ 0.73
VEGFA-222ENST00000520948 NOC3LQ8WTT2 800 aaKnown RBP19.62■□□□□ 0.73
VEGFA-222ENST00000520948 DDX27Q96GQ7 796 aaKnown RBP19.62■□□□□ 0.73
VEGFA-222ENST00000520948 TSG101Q99816 390 aa19.62■□□□□ 0.73
VEGFA-222ENST00000520948 COLEC11Q9BWP8 271 aa19.62■□□□□ 0.73
VEGFA-222ENST00000520948 TUBGCP4Q9UGJ1 667 aa19.62■□□□□ 0.73
VEGFA-222ENST00000520948 IRAK3Q9Y616 596 aa19.62■□□□□ 0.73
VEGFA-222ENST00000520948 XPOTO43592 962 aaKnown RBP19.61■□□□□ 0.73
VEGFA-222ENST00000520948 CLDN10P78369 228 aa19.61■□□□□ 0.73
VEGFA-222ENST00000520948 PAK1Q13153 545 aa19.61■□□□□ 0.73
VEGFA-222ENST00000520948 NFKBIBQ15653 356 aa19.61■□□□□ 0.73
VEGFA-222ENST00000520948 SKOR2Q2VWA4 1001 aaPredicted RBP19.61■□□□□ 0.73
VEGFA-222ENST00000520948 DPCR1Q3MIW9 517 aa19.61■□□□□ 0.73
VEGFA-222ENST00000520948 KLHL10Q6JEL2 608 aa19.61■□□□□ 0.73
VEGFA-222ENST00000520948 TMEM105Q8N8V8 129 aa19.61■□□□□ 0.73
VEGFA-222ENST00000520948 CXorf38Q8TB03 319 aa19.61■□□□□ 0.73
VEGFA-222ENST00000520948 PARD3BQ8TEW8 1205 aa19.61■□□□□ 0.73
VEGFA-222ENST00000520948 RABGGTAQ92696 567 aa19.61■□□□□ 0.73
VEGFA-222ENST00000520948 BORCS6Q96GS4 357 aa19.61■□□□□ 0.73
VEGFA-222ENST00000520948 MKNK1Q9BUB5 465 aa19.61■□□□□ 0.73
VEGFA-222ENST00000520948 RWDD2AQ9UIY3 292 aa19.61■□□□□ 0.73
VEGFA-222ENST00000520948 PTPRJQ12913 1337 aa19.6■□□□□ 0.73
VEGFA-222ENST00000520948 ANO9A1A5B4 782 aa19.6■□□□□ 0.73
VEGFA-222ENST00000520948 BICDL2A1A5D9 508 aa19.6■□□□□ 0.73
VEGFA-222ENST00000520948 CETN3O15182 167 aa19.6■□□□□ 0.73
VEGFA-222ENST00000520948 PSMC2P35998 433 aaKnown RBP19.6■□□□□ 0.73
VEGFA-222ENST00000520948 ENPEPQ07075 957 aa19.6■□□□□ 0.73
VEGFA-222ENST00000520948 CT47A1Q5JQC4 288 aaPredicted RBP19.6■□□□□ 0.73
VEGFA-222ENST00000520948 CEP135Q66GS9 1140 aa19.6■□□□□ 0.73
VEGFA-222ENST00000520948 ZDHHC14Q8IZN3 488 aa19.6■□□□□ 0.73
VEGFA-222ENST00000520948 C3orf58Q8NDZ4 430 aa19.6■□□□□ 0.73
VEGFA-222ENST00000520948 BEST2Q8NFU1 509 aa19.6■□□□□ 0.73
VEGFA-222ENST00000520948 TMC2Q8TDI7 906 aa19.6■□□□□ 0.73
VEGFA-222ENST00000520948 ZNF516Q92618 1163 aa19.6■□□□□ 0.73
VEGFA-222ENST00000520948 SFXN1Q9H9B4 322 aa19.6■□□□□ 0.73
VEGFA-222ENST00000520948 INTS13Q9NVM9 706 aa19.6■□□□□ 0.73
VEGFA-222ENST00000520948 ADAM28Q9UKQ2 775 aa19.6■□□□□ 0.73
VEGFA-222ENST00000520948 CTNND2Q9UQB3 1225 aa19.6■□□□□ 0.73
VEGFA-222ENST00000520948 FRMD4BQ9Y2L6 1034 aa19.6■□□□□ 0.73
VEGFA-222ENST00000520948 PRG3Q9Y2Y8 225 aaPredicted RBP19.6■□□□□ 0.73
VEGFA-222ENST00000520948 PIRO00625 290 aa19.59■□□□□ 0.73
VEGFA-222ENST00000520948 GALR2O43603 387 aaPredicted RBP19.59■□□□□ 0.73
VEGFA-222ENST00000520948 KIF4AO95239 1232 aa19.59■□□□□ 0.73
VEGFA-222ENST00000520948 KLRC2P26717 231 aa19.59■□□□□ 0.73
VEGFA-222ENST00000520948 GUCY2FP51841 1108 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms