RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 CCDC197Q8NCU1 140 aa9.23□□□□□ -0.93
CTNNA1-223ENST00000520520 OR6J1Q8NGC5 347 aa9.23□□□□□ -0.93
CTNNA1-223ENST00000520520 SLC30A5Q8TAD4 765 aa9.23□□□□□ -0.93
CTNNA1-223ENST00000520520 SLC35G2Q8TBE7 412 aa9.23□□□□□ -0.93
CTNNA1-223ENST00000520520 LENG9Q96B70 501 aa9.23□□□□□ -0.93
CTNNA1-223ENST00000520520 TLCD1Q96CP7 247 aa9.23□□□□□ -0.93
CTNNA1-223ENST00000520520 CHMP6Q96FZ7 201 aa9.23□□□□□ -0.93
CTNNA1-223ENST00000520520 FAM81BQ96LP2 452 aa9.23□□□□□ -0.93
CTNNA1-223ENST00000520520 RPS6KC1Q96S38 1066 aa9.23□□□□□ -0.93
CTNNA1-223ENST00000520520 HINFPQ9BQA5 517 aa9.23□□□□□ -0.93
CTNNA1-223ENST00000520520 RUSC1Q9BVN2 902 aa9.23□□□□□ -0.93
CTNNA1-223ENST00000520520 TEKT3Q9BXF9 490 aa9.23□□□□□ -0.93
CTNNA1-223ENST00000520520 PABPC3Q9H361 631 aaKnown RBP9.23□□□□□ -0.93
CTNNA1-223ENST00000520520 PPANQ9NQ55 473 aaKnown RBP9.23□□□□□ -0.93
CTNNA1-223ENST00000520520 CYP39A1Q9NYL5 469 aa9.23□□□□□ -0.93
CTNNA1-223ENST00000520520 SAMD15Q9P1V8 674 aa9.23□□□□□ -0.93
CTNNA1-223ENST00000520520 AMACRQ9UHK6 382 aa9.23□□□□□ -0.93
CTNNA1-223ENST00000520520 NOVA2Q9UNW9 492 aaKnown RBP9.23□□□□□ -0.93
CTNNA1-223ENST00000520520 NFS1Q9Y697 457 aa9.23□□□□□ -0.93
CTNNA1-223ENST00000520520 MYO9BQ13459 2157 aa9.22□□□□□ -0.93
CTNNA1-223ENST00000520520 ANKRD65E5RJM6 399 aa9.22□□□□□ -0.93
CTNNA1-223ENST00000520520 NFIBO00712 420 aa9.22□□□□□ -0.93
CTNNA1-223ENST00000520520 RGS16O15492 202 aaPredicted RBP9.22□□□□□ -0.93
CTNNA1-223ENST00000520520 EXOC3O60645 756 aa9.22□□□□□ -0.93
CTNNA1-223ENST00000520520 MTA2O94776 668 aa9.22□□□□□ -0.93
CTNNA1-223ENST00000520520 CA3P07451 260 aa9.22□□□□□ -0.93
CTNNA1-223ENST00000520520 POLR2MP0CAP2 368 aa9.22□□□□□ -0.93
CTNNA1-223ENST00000520520 FDX1P10109 184 aa9.22□□□□□ -0.93
CTNNA1-223ENST00000520520 SLC8A1P32418 973 aa9.22□□□□□ -0.93
CTNNA1-223ENST00000520520 FNTAP49354 379 aa9.22□□□□□ -0.93
CTNNA1-223ENST00000520520 MAGOHP61326 146 aaKnown RBP9.22□□□□□ -0.93
CTNNA1-223ENST00000520520 CYP4A11Q02928 519 aa9.22□□□□□ -0.93
CTNNA1-223ENST00000520520 IFT88Q13099 833 aa9.22□□□□□ -0.93
CTNNA1-223ENST00000520520 CALCOCO2Q13137 446 aa9.22□□□□□ -0.93
CTNNA1-223ENST00000520520 SNCBQ16143 134 aa9.22□□□□□ -0.93
CTNNA1-223ENST00000520520 TKFCQ3LXA3 575 aa9.22□□□□□ -0.93
CTNNA1-223ENST00000520520 USH1GQ495M9 461 aa9.22□□□□□ -0.93
CTNNA1-223ENST00000520520 LACTB2Q53H82 288 aaPredicted RBP9.22□□□□□ -0.93
CTNNA1-223ENST00000520520 DUPD1Q68J44 220 aa9.22□□□□□ -0.93
CTNNA1-223ENST00000520520 IQSEC1Q6DN90 963 aa9.22□□□□□ -0.93
CTNNA1-223ENST00000520520 SLC30A10Q6XR72 485 aa9.22□□□□□ -0.93
CTNNA1-223ENST00000520520 SYDE1Q6ZW31 735 aaPredicted RBP9.22□□□□□ -0.93
CTNNA1-223ENST00000520520 JAMLQ86YT9 394 aa9.22□□□□□ -0.93
CTNNA1-223ENST00000520520 GLYCTKQ8IVS8 523 aa9.22□□□□□ -0.93
CTNNA1-223ENST00000520520 C12orf56Q8IXR9 622 aa9.22□□□□□ -0.93
CTNNA1-223ENST00000520520 CCDC13Q8IYE1 715 aa9.22□□□□□ -0.93
CTNNA1-223ENST00000520520 LNX1Q8TBB1 728 aaPredicted RBP9.22□□□□□ -0.93
CTNNA1-223ENST00000520520 TMEM174Q8WUU8 243 aa9.22□□□□□ -0.93
CTNNA1-223ENST00000520520 ARNTL2Q8WYA1 636 aa9.22□□□□□ -0.93
CTNNA1-223ENST00000520520 SLC5A5Q92911 643 aa9.22□□□□□ -0.93
CTNNA1-223ENST00000520520 TATDN2Q93075 761 aa9.22□□□□□ -0.93
CTNNA1-223ENST00000520520 MAGOHBQ96A72 148 aaKnown RBP9.22□□□□□ -0.93
CTNNA1-223ENST00000520520 TRIM11Q96F44 468 aa9.22□□□□□ -0.93
CTNNA1-223ENST00000520520 BORCS6Q96GS4 357 aa9.22□□□□□ -0.93
CTNNA1-223ENST00000520520 AGPAT1Q99943 283 aa9.22□□□□□ -0.93
CTNNA1-223ENST00000520520 NCAPGQ9BPX3 1015 aa9.22□□□□□ -0.93
CTNNA1-223ENST00000520520 TMEM109Q9BVC6 243 aa9.22□□□□□ -0.93
CTNNA1-223ENST00000520520 DPH5Q9H2P9 285 aa9.22□□□□□ -0.93
CTNNA1-223ENST00000520520 KDM4CQ9H3R0 1056 aa9.22□□□□□ -0.93
CTNNA1-223ENST00000520520 RABEP2Q9H5N1 569 aa9.22□□□□□ -0.93
CTNNA1-223ENST00000520520 AGPAT3Q9NRZ7 376 aa9.22□□□□□ -0.93
CTNNA1-223ENST00000520520 GEMIN8Q9NWZ8 242 aaKnown RBP9.22□□□□□ -0.93
CTNNA1-223ENST00000520520 CTTNBP2NLQ9P2B4 639 aa9.22□□□□□ -0.93
CTNNA1-223ENST00000520520 LARSQ9P2J5 1176 aaKnown RBP9.22□□□□□ -0.93
CTNNA1-223ENST00000520520 TCEAL9Q9UHQ7 104 aa9.22□□□□□ -0.93
CTNNA1-223ENST00000520520 EXOC7Q9UPT5 735 aa9.22□□□□□ -0.93
CTNNA1-223ENST00000520520 NOD1Q9Y239 953 aa9.22□□□□□ -0.93
CTNNA1-223ENST00000520520 MRPL11Q9Y3B7 192 aaKnown RBP9.22□□□□□ -0.93
CTNNA1-223ENST00000520520 SCN5AQ14524 2016 aa9.22□□□□□ -0.93
CTNNA1-223ENST00000520520 LCTP09848 1927 aa9.21□□□□□ -0.93
CTNNA1-223ENST00000520520 CFAP73A6NFT4 308 aa9.21□□□□□ -0.94
CTNNA1-223ENST00000520520 FAM86B1E9PN63 330 aa9.21□□□□□ -0.94
CTNNA1-223ENST00000520520 NDC80O14777 642 aa9.21□□□□□ -0.94
CTNNA1-223ENST00000520520 CLIC2O15247 247 aa9.21□□□□□ -0.94
CTNNA1-223ENST00000520520 PMM2O15305 246 aa9.21□□□□□ -0.94
CTNNA1-223ENST00000520520 DDX3YO15523 660 aaKnown RBP9.21□□□□□ -0.94
CTNNA1-223ENST00000520520 ASAP2O43150 1006 aa9.21□□□□□ -0.94
CTNNA1-223ENST00000520520 TGFB1I1O43294 461 aa9.21□□□□□ -0.94
CTNNA1-223ENST00000520520 RTN2O75298 545 aa9.21□□□□□ -0.94
CTNNA1-223ENST00000520520 DNAJC8O75937 253 aaPredicted RBP9.21□□□□□ -0.94
CTNNA1-223ENST00000520520 FAM86B2P0C5J1 330 aa9.21□□□□□ -0.94
CTNNA1-223ENST00000520520 EZRP15311 586 aaKnown RBP9.21□□□□□ -0.94
CTNNA1-223ENST00000520520 ABCB4P21439 1286 aa9.21□□□□□ -0.94
CTNNA1-223ENST00000520520 ABCD1P33897 745 aa9.21□□□□□ -0.94
CTNNA1-223ENST00000520520 HOXD13P35453 343 aa9.21□□□□□ -0.94
CTNNA1-223ENST00000520520 CYP2J2P51589 502 aa9.21□□□□□ -0.94
CTNNA1-223ENST00000520520 ALDH5A1P51649 535 aaPredicted RBP9.21□□□□□ -0.94
CTNNA1-223ENST00000520520 GPC5P78333 572 aa9.21□□□□□ -0.94
CTNNA1-223ENST00000520520 CAV1Q03135 178 aa9.21□□□□□ -0.94
CTNNA1-223ENST00000520520 ODR4Q5SWX8 454 aa9.21□□□□□ -0.94
CTNNA1-223ENST00000520520 FBXW10Q5XX13 1052 aa9.21□□□□□ -0.94
CTNNA1-223ENST00000520520 PPP1R2P3Q6NXS1 205 aa9.21□□□□□ -0.94
CTNNA1-223ENST00000520520 C6orf89Q6UWU4 347 aa9.21□□□□□ -0.94
CTNNA1-223ENST00000520520 C1orf186Q6ZWK4 172 aa9.21□□□□□ -0.94
CTNNA1-223ENST00000520520 TRMT10CQ7L0Y3 403 aaKnown RBP9.21□□□□□ -0.94
CTNNA1-223ENST00000520520 GBP7Q8N8V2 638 aaPredicted RBP9.21□□□□□ -0.94
CTNNA1-223ENST00000520520 SLC43A3Q8NBI5 491 aa9.21□□□□□ -0.94
CTNNA1-223ENST00000520520 MAGEC3Q8TD91 643 aa9.21□□□□□ -0.94
CTNNA1-223ENST00000520520 GRK7Q8WTQ7 553 aa9.21□□□□□ -0.94
CTNNA1-223ENST00000520520 KIFAP3Q92845 792 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms