RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 OR5B17Q8NGF7 314 aa23.74■■□□□ 1.39
VEGFA-217ENST00000518538 CXorf38Q8TB03 319 aa23.74■■□□□ 1.39
VEGFA-217ENST00000518538 FAM84AQ96KN4 292 aa23.74■■□□□ 1.39
VEGFA-217ENST00000518538 H7C4K7 107 aa23.73■■□□□ 1.39
VEGFA-217ENST00000518538 MAPK13O15264 365 aa23.73■■□□□ 1.39
VEGFA-217ENST00000518538 SPTLC1O15269 473 aa23.73■■□□□ 1.39
VEGFA-217ENST00000518538 TNNI1P19237 187 aa23.73■■□□□ 1.39
VEGFA-217ENST00000518538 SMAD4Q13485 552 aaKnown RBP23.73■■□□□ 1.39
VEGFA-217ENST00000518538 STIM1Q13586 685 aa23.73■■□□□ 1.39
VEGFA-217ENST00000518538 SYCE2Q6PIF2 218 aa23.73■■□□□ 1.39
VEGFA-217ENST00000518538 LRRC52Q8N7C0 313 aa23.73■■□□□ 1.39
VEGFA-217ENST00000518538 GZF1Q9H116 711 aaPredicted RBP23.73■■□□□ 1.39
VEGFA-217ENST00000518538 CLSTN2Q9H4D0 955 aa23.73■■□□□ 1.39
VEGFA-217ENST00000518538 KIAA1468Q9P260 1216 aa23.73■■□□□ 1.39
VEGFA-217ENST00000518538 SIX4Q9UIU6 781 aa23.73■■□□□ 1.39
VEGFA-217ENST00000518538 AGAP1Q9UPQ3 857 aa23.73■■□□□ 1.39
VEGFA-217ENST00000518538 BRWD1Q9NSI6 2320 aa23.73■■□□□ 1.39
VEGFA-217ENST00000518538 ARHGEF37A1IGU5 675 aa23.72■■□□□ 1.39
VEGFA-217ENST00000518538 BIN1O00499 593 aa23.72■■□□□ 1.39
VEGFA-217ENST00000518538 PSMA7O14818 248 aa23.72■■□□□ 1.39
VEGFA-217ENST00000518538 TBC1D4O60343 1298 aa23.72■■□□□ 1.39
VEGFA-217ENST00000518538 BMP1P13497 986 aa23.72■■□□□ 1.39
VEGFA-217ENST00000518538 TYMPP19971 482 aa23.72■■□□□ 1.39
VEGFA-217ENST00000518538 BMP6P22004 513 aa23.72■■□□□ 1.39
VEGFA-217ENST00000518538 RBP5P82980 135 aa23.72■■□□□ 1.39
VEGFA-217ENST00000518538 ADAM9Q13443 819 aa23.72■■□□□ 1.39
VEGFA-217ENST00000518538 SV2CQ496J9 727 aa23.72■■□□□ 1.39
VEGFA-217ENST00000518538 PTCRAQ6ISU1 281 aaPredicted RBP23.72■■□□□ 1.39
VEGFA-217ENST00000518538 PALB2Q86YC2 1186 aa23.72■■□□□ 1.39
VEGFA-217ENST00000518538 TRIML1Q8N9V2 468 aa23.72■■□□□ 1.39
VEGFA-217ENST00000518538 PARD3BQ8TEW8 1205 aa23.72■■□□□ 1.39
VEGFA-217ENST00000518538 SENP8Q96LD8 212 aa23.72■■□□□ 1.39
VEGFA-217ENST00000518538 POP1Q99575 1024 aaKnown RBP23.72■■□□□ 1.39
VEGFA-217ENST00000518538 TSG101Q99816 390 aa23.72■■□□□ 1.39
VEGFA-217ENST00000518538 DPP7Q9UHL4 492 aa23.72■■□□□ 1.39
VEGFA-217ENST00000518538 FAM50BQ9Y247 325 aa23.72■■□□□ 1.39
VEGFA-217ENST00000518538 GRXCR2A6NFK2 248 aa23.71■■□□□ 1.39
VEGFA-217ENST00000518538 KPNA7A9QM74 516 aa23.71■■□□□ 1.39
VEGFA-217ENST00000518538 ADAM12O43184 909 aa23.71■■□□□ 1.39
VEGFA-217ENST00000518538 MBTPS2O43462 519 aa23.71■■□□□ 1.39
VEGFA-217ENST00000518538 TGM5O43548 720 aa23.71■■□□□ 1.39
VEGFA-217ENST00000518538 KRT19P08727 400 aa23.71■■□□□ 1.39
VEGFA-217ENST00000518538 ODC1P11926 461 aa23.71■■□□□ 1.39
VEGFA-217ENST00000518538 CLDN10P78369 228 aa23.71■■□□□ 1.39
VEGFA-217ENST00000518538 YWHAHQ04917 246 aaPredicted RBP23.71■■□□□ 1.39
VEGFA-217ENST00000518538 RAB33AQ14088 237 aa23.71■■□□□ 1.39
VEGFA-217ENST00000518538 CTXN3Q4LDR2 81 aa23.71■■□□□ 1.39
VEGFA-217ENST00000518538 ZNF280DQ6N043 979 aa23.71■■□□□ 1.39
VEGFA-217ENST00000518538 LILRA6Q6PI73 481 aa23.71■■□□□ 1.39
VEGFA-217ENST00000518538 ELMSAN1Q6PJG2 1045 aa23.71■■□□□ 1.39
VEGFA-217ENST00000518538 RSPO2Q6UXX9 243 aaPredicted RBP23.71■■□□□ 1.39
VEGFA-217ENST00000518538 PLEKHO2Q8TD55 490 aa23.71■■□□□ 1.39
VEGFA-217ENST00000518538 TMC2Q8TDI7 906 aa23.71■■□□□ 1.39
VEGFA-217ENST00000518538 HDAC7Q8WUI4 952 aa23.71■■□□□ 1.39
VEGFA-217ENST00000518538 BORCS6Q96GS4 357 aa23.71■■□□□ 1.39
VEGFA-217ENST00000518538 DHTKD1Q96HY7 919 aaPredicted RBP23.71■■□□□ 1.39
VEGFA-217ENST00000518538 S1PR5Q9H228 398 aa23.71■■□□□ 1.39
VEGFA-217ENST00000518538 MAN1C1Q9NR34 630 aa23.71■■□□□ 1.39
VEGFA-217ENST00000518538 CDY1Q9Y6F8 540 aa23.71■■□□□ 1.39
VEGFA-217ENST00000518538 XIRP2A4UGR9 3374 aa23.7■■□□□ 1.38
VEGFA-217ENST00000518538 AKAP3O75969 853 aa23.7■■□□□ 1.38
VEGFA-217ENST00000518538 OAZ2O95190 189 aa23.7■■□□□ 1.38
VEGFA-217ENST00000518538 CD44P16070 742 aaKnown RBP23.7■■□□□ 1.38
VEGFA-217ENST00000518538 CCNE1P24864 410 aa23.7■■□□□ 1.38
VEGFA-217ENST00000518538 OR1D2P34982 312 aa23.7■■□□□ 1.38
VEGFA-217ENST00000518538 PSMC2P35998 433 aaKnown RBP23.7■■□□□ 1.38
VEGFA-217ENST00000518538 LRRC63Q05C16 580 aa23.7■■□□□ 1.38
VEGFA-217ENST00000518538 SLC8B1Q6J4K2 584 aa23.7■■□□□ 1.38
VEGFA-217ENST00000518538 TRAPPC11Q7Z392 1133 aa23.7■■□□□ 1.38
VEGFA-217ENST00000518538 USP37Q86T82 979 aa23.7■■□□□ 1.38
VEGFA-217ENST00000518538 NUP62CLQ9H1M0 184 aa23.7■■□□□ 1.38
VEGFA-217ENST00000518538 PLEKHA4Q9H4M7 779 aa23.7■■□□□ 1.38
VEGFA-217ENST00000518538 SFXN1Q9H9B4 322 aa23.7■■□□□ 1.38
VEGFA-217ENST00000518538 FBXL5Q9UKA1 691 aa23.7■■□□□ 1.38
VEGFA-217ENST00000518538 DSEQ9UL01 958 aa23.7■■□□□ 1.38
VEGFA-217ENST00000518538 R3HCC1Q9Y3T6 440 aaKnown RBP23.7■■□□□ 1.38
VEGFA-217ENST00000518538 TIMM13Q9Y5L4 95 aaPredicted RBP23.7■■□□□ 1.38
VEGFA-217ENST00000518538 PLXNA3P51805 1871 aa23.7■■□□□ 1.38
VEGFA-217ENST00000518538 SCN1AP35498 2009 aa23.69■■□□□ 1.38
VEGFA-217ENST00000518538 LRRIQ3A6PVS8 624 aaPredicted RBP23.69■■□□□ 1.38
VEGFA-217ENST00000518538 CYB561D2O14569 222 aa23.69■■□□□ 1.38
VEGFA-217ENST00000518538 CYP11A1P05108 521 aa23.69■■□□□ 1.38
VEGFA-217ENST00000518538 AP3M2P53677 418 aa23.69■■□□□ 1.38
VEGFA-217ENST00000518538 PMS1P54277 932 aaKnown RBP23.69■■□□□ 1.38
VEGFA-217ENST00000518538 ANKRD40Q6AI12 368 aa23.69■■□□□ 1.38
VEGFA-217ENST00000518538 SCARA3Q6AZY7 606 aa23.69■■□□□ 1.38
VEGFA-217ENST00000518538 INTS8Q75QN2 995 aaKnown RBP23.69■■□□□ 1.38
VEGFA-217ENST00000518538 ZC3H3Q8IXZ2 948 aaKnown RBP23.69■■□□□ 1.38
VEGFA-217ENST00000518538 FAM186BQ8IYM0 893 aa23.69■■□□□ 1.38
VEGFA-217ENST00000518538 ZNF516Q92618 1163 aa23.69■■□□□ 1.38
VEGFA-217ENST00000518538 MKNK1Q9BUB5 465 aa23.69■■□□□ 1.38
VEGFA-217ENST00000518538 OXCT2Q9BYC2 517 aaPredicted RBP23.69■■□□□ 1.38
VEGFA-217ENST00000518538 SPDYE4A6NLX3 237 aa23.68■■□□□ 1.38
VEGFA-217ENST00000518538 PPP1R3GB7ZBB8 358 aa23.68■■□□□ 1.38
VEGFA-217ENST00000518538 CETN3O15182 167 aa23.68■■□□□ 1.38
VEGFA-217ENST00000518538 IL9P15248 144 aa23.68■■□□□ 1.38
VEGFA-217ENST00000518538 FKBP3Q00688 224 aaKnown RBP23.68■■□□□ 1.38
VEGFA-217ENST00000518538 ITIH3Q06033 890 aa23.68■■□□□ 1.38
VEGFA-217ENST00000518538 ENPEPQ07075 957 aa23.68■■□□□ 1.38
VEGFA-217ENST00000518538 BFSP1Q12934 665 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms