RNA–Protein interactions for RNA: ENST00000517693.5

SPIDR-203, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 1,848 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-203ENST00000517693 SNX27Q96L92 541 aa12.59□□□□□ -0.39
SPIDR-203ENST00000517693 PCDHB18PQ96TA0 734 aa12.59□□□□□ -0.39
SPIDR-203ENST00000517693 BCO2Q9BYV7 579 aa12.59□□□□□ -0.39
SPIDR-203ENST00000517693 ARHGAP39Q9C0H5 1083 aa12.59□□□□□ -0.39
SPIDR-203ENST00000517693 TRPV2Q9Y5S1 764 aa12.59□□□□□ -0.39
SPIDR-203ENST00000517693 SCN10AQ9Y5Y9 1956 aa12.58□□□□□ -0.4
SPIDR-203ENST00000517693 CCDC151A5D8V7 595 aa12.58□□□□□ -0.4
SPIDR-203ENST00000517693 BUB1BO60566 1050 aaPredicted RBP12.58□□□□□ -0.4
SPIDR-203ENST00000517693 CD4P01730 458 aa12.58□□□□□ -0.4
SPIDR-203ENST00000517693 CALB1P05937 261 aa12.58□□□□□ -0.4
SPIDR-203ENST00000517693 PRKAR2AP13861 404 aaKnown RBP12.58□□□□□ -0.4
SPIDR-203ENST00000517693 H2AFXP16104 143 aaPredicted RBP12.58□□□□□ -0.4
SPIDR-203ENST00000517693 HOXA11P31270 313 aaPredicted RBP12.58□□□□□ -0.4
SPIDR-203ENST00000517693 ASPAP45381 313 aa12.58□□□□□ -0.4
SPIDR-203ENST00000517693 PRMT2P55345 433 aa12.58□□□□□ -0.4
SPIDR-203ENST00000517693 PTPN11Q06124 597 aaPredicted RBP12.58□□□□□ -0.4
SPIDR-203ENST00000517693 C1QBPQ07021 282 aaKnown RBP12.58□□□□□ -0.4
SPIDR-203ENST00000517693 CACNB2Q08289 660 aaPredicted RBP12.58□□□□□ -0.4
SPIDR-203ENST00000517693 TMEM62Q0P6H9 643 aa12.58□□□□□ -0.4
SPIDR-203ENST00000517693 PPP2R5EQ16537 467 aa12.58□□□□□ -0.4
SPIDR-203ENST00000517693 MAP9Q49MG5 647 aa12.58□□□□□ -0.4
SPIDR-203ENST00000517693 TMCO3Q6UWJ1 677 aa12.58□□□□□ -0.4
SPIDR-203ENST00000517693 RNF180Q86T96 592 aa12.58□□□□□ -0.4
SPIDR-203ENST00000517693 NT5DC3Q86UY8 548 aa12.58□□□□□ -0.4
SPIDR-203ENST00000517693 TMEM192Q8IY95 271 aa12.58□□□□□ -0.4
SPIDR-203ENST00000517693 MMGT1Q8N4V1 131 aa12.58□□□□□ -0.4
SPIDR-203ENST00000517693 HES6Q96HZ4 224 aa12.58□□□□□ -0.4
SPIDR-203ENST00000517693 MMS19Q96T76 1030 aa12.58□□□□□ -0.4
SPIDR-203ENST00000517693 CELF4Q9BZC1 486 aaKnown RBP12.58□□□□□ -0.4
SPIDR-203ENST00000517693 ABCB6Q9NP58 842 aa12.58□□□□□ -0.4
SPIDR-203ENST00000517693 OSGEPQ9NPF4 335 aa12.58□□□□□ -0.4
SPIDR-203ENST00000517693 DPP3Q9NY33 737 aa12.58□□□□□ -0.4
SPIDR-203ENST00000517693 CNTN3Q9P232 1028 aa12.58□□□□□ -0.4
SPIDR-203ENST00000517693 CNOT8Q9UFF9 292 aaKnown RBP12.58□□□□□ -0.4
SPIDR-203ENST00000517693 PCDHGC3Q9UN70 934 aa12.58□□□□□ -0.4
SPIDR-203ENST00000517693 CITO14578 2027 aa12.58□□□□□ -0.4
SPIDR-203ENST00000517693 PGRMC1O00264 195 aaKnown RBP12.58□□□□□ -0.4
SPIDR-203ENST00000517693 TLR3O15455 904 aaKnown RBP12.58□□□□□ -0.4
SPIDR-203ENST00000517693 NCK2O43639 380 aa12.58□□□□□ -0.4
SPIDR-203ENST00000517693 AOC2O75106 756 aa12.58□□□□□ -0.4
SPIDR-203ENST00000517693 POLR2BP30876 1174 aaKnown RBP12.58□□□□□ -0.4
SPIDR-203ENST00000517693 NAA30Q147X3 362 aaPredicted RBP12.58□□□□□ -0.4
SPIDR-203ENST00000517693 STILQ15468 1287 aa12.58□□□□□ -0.4
SPIDR-203ENST00000517693 NBPF20Q3BBV1 942 aa12.58□□□□□ -0.4
SPIDR-203ENST00000517693 WDR72Q3MJ13 1102 aa12.58□□□□□ -0.4
SPIDR-203ENST00000517693 PHF13Q86YI8 300 aaPredicted RBP12.58□□□□□ -0.4
SPIDR-203ENST00000517693 MCOLN2Q8IZK6 566 aa12.58□□□□□ -0.4
SPIDR-203ENST00000517693 LRRC52Q8N7C0 313 aa12.58□□□□□ -0.4
SPIDR-203ENST00000517693 TMEM35BQ8NCS4 154 aa12.58□□□□□ -0.4
SPIDR-203ENST00000517693 SPATA4Q8NEY3 305 aa12.58□□□□□ -0.4
SPIDR-203ENST00000517693 RAET1EQ8TD07 263 aa12.58□□□□□ -0.4
SPIDR-203ENST00000517693 ACTRT1Q8TDG2 376 aa12.58□□□□□ -0.4
SPIDR-203ENST00000517693 PXYLP1Q8TE99 480 aa12.58□□□□□ -0.4
SPIDR-203ENST00000517693 COG1Q8WTW3 980 aa12.58□□□□□ -0.4
SPIDR-203ENST00000517693 ARHGEF26Q96DR7 871 aa12.58□□□□□ -0.4
SPIDR-203ENST00000517693 HPDLQ96IR7 371 aa12.58□□□□□ -0.4
SPIDR-203ENST00000517693 ZNF560Q96MR9 790 aa12.58□□□□□ -0.4
SPIDR-203ENST00000517693 NUP85Q9BW27 656 aa12.58□□□□□ -0.4
SPIDR-203ENST00000517693 WNT8AQ9H1J5 351 aa12.58□□□□□ -0.4
SPIDR-203ENST00000517693 CARD9Q9H257 536 aa12.58□□□□□ -0.4
SPIDR-203ENST00000517693 CHST12Q9NRB3 414 aa12.58□□□□□ -0.4
SPIDR-203ENST00000517693 NXF1Q9UBU9 619 aaKnown RBP12.58□□□□□ -0.4
SPIDR-203ENST00000517693 SIX4Q9UIU6 781 aa12.58□□□□□ -0.4
SPIDR-203ENST00000517693 KIAA1257Q9ULG3 409 aa12.58□□□□□ -0.4
SPIDR-203ENST00000517693 UBQLN1Q9UMX0 589 aaKnown RBP12.58□□□□□ -0.4
SPIDR-203ENST00000517693 UMODL1Q5DID0 1318 aa12.57□□□□□ -0.4
SPIDR-203ENST00000517693 ZNF185O15231 689 aa12.57□□□□□ -0.4
SPIDR-203ENST00000517693 ADAMTS4O75173 837 aa12.57□□□□□ -0.4
SPIDR-203ENST00000517693 PGK1P00558 417 aa12.57□□□□□ -0.4
SPIDR-203ENST00000517693 CD58P19256 250 aa12.57□□□□□ -0.4
SPIDR-203ENST00000517693 PNPLA4P41247 253 aa12.57□□□□□ -0.4
SPIDR-203ENST00000517693 SLC1A1P43005 524 aa12.57□□□□□ -0.4
SPIDR-203ENST00000517693 NOMO3P69849 1222 aa12.57□□□□□ -0.4
SPIDR-203ENST00000517693 RBM10P98175 930 aaKnown RBP12.57□□□□□ -0.4
SPIDR-203ENST00000517693 TAP1Q03518 808 aa12.57□□□□□ -0.4
SPIDR-203ENST00000517693 FAM47CQ5HY64 1035 aa12.57□□□□□ -0.4
SPIDR-203ENST00000517693 NAA35Q5VZE5 725 aa12.57□□□□□ -0.4
SPIDR-203ENST00000517693 WDR93Q6P2C0 686 aa12.57□□□□□ -0.4
SPIDR-203ENST00000517693 FBXO38Q6PIJ6 1188 aa12.57□□□□□ -0.4
SPIDR-203ENST00000517693 CXCL17Q6UXB2 119 aa12.57□□□□□ -0.4
SPIDR-203ENST00000517693 ZNF606Q8WXB4 792 aa12.57□□□□□ -0.4
SPIDR-203ENST00000517693 FAM84AQ96KN4 292 aa12.57□□□□□ -0.4
SPIDR-203ENST00000517693 MIS12Q9H081 205 aa12.57□□□□□ -0.4
SPIDR-203ENST00000517693 ARFGAP3Q9NP61 516 aa12.57□□□□□ -0.4
SPIDR-203ENST00000517693 STRIP2Q9ULQ0 834 aa12.57□□□□□ -0.4
SPIDR-203ENST00000517693 TTC7AQ9ULT0 858 aaPredicted RBP12.57□□□□□ -0.4
SPIDR-203ENST00000517693 AGAP1Q9UPQ3 857 aa12.57□□□□□ -0.4
SPIDR-203ENST00000517693 STXBP5LQ9Y2K9 1186 aa12.57□□□□□ -0.4
SPIDR-203ENST00000517693 CCDC66A2RUB6 948 aa12.56□□□□□ -0.4
SPIDR-203ENST00000517693 MYADML2A6NDP7 307 aa12.56□□□□□ -0.4
SPIDR-203ENST00000517693 CCDC188H7C350 402 aa12.56□□□□□ -0.4
SPIDR-203ENST00000517693 ATP8B1O43520 1251 aa12.56□□□□□ -0.4
SPIDR-203ENST00000517693 CYP3A5P20815 502 aa12.56□□□□□ -0.4
SPIDR-203ENST00000517693 FGFR4P22455 802 aa12.56□□□□□ -0.4
SPIDR-203ENST00000517693 CXCR5P32302 372 aa12.56□□□□□ -0.4
SPIDR-203ENST00000517693 SCARA5Q6ZMJ2 495 aa12.56□□□□□ -0.4
SPIDR-203ENST00000517693 MON1BQ7L1V2 547 aa12.56□□□□□ -0.4
SPIDR-203ENST00000517693 SERINC5Q86VE9 423 aa12.56□□□□□ -0.4
SPIDR-203ENST00000517693 KLHDC9Q8NEP7 349 aa12.56□□□□□ -0.4
SPIDR-203ENST00000517693 PSMB7Q99436 277 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms