RNA–Protein interactions for RNA: ENST00000517660.1

PDGFRB-203, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 611 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-203ENST00000517660 MRPL58Q14197 206 aaKnown RBP11.5□□□□□ -0.57
PDGFRB-203ENST00000517660 ZBTB6Q15916 424 aa11.5□□□□□ -0.57
PDGFRB-203ENST00000517660 ZNF528Q3MIS6 628 aa11.5□□□□□ -0.57
PDGFRB-203ENST00000517660 AXDND1Q5T1B0 1012 aaPredicted RBP11.5□□□□□ -0.57
PDGFRB-203ENST00000517660 SLC8B1Q6J4K2 584 aa11.5□□□□□ -0.57
PDGFRB-203ENST00000517660 DYMQ7RTS9 669 aa11.5□□□□□ -0.57
PDGFRB-203ENST00000517660 ZNF720Q7Z2F6 126 aa11.5□□□□□ -0.57
PDGFRB-203ENST00000517660 MAP4K3Q8IVH8 894 aa11.5□□□□□ -0.57
PDGFRB-203ENST00000517660 CD302Q8IX05 232 aa11.5□□□□□ -0.57
PDGFRB-203ENST00000517660 SLC44A3Q8N4M1 653 aa11.5□□□□□ -0.57
PDGFRB-203ENST00000517660 APPL2Q8NEU8 664 aa11.5□□□□□ -0.57
PDGFRB-203ENST00000517660 PJA1Q8NG27 643 aa11.5□□□□□ -0.57
PDGFRB-203ENST00000517660 GPR152Q8TDT2 470 aa11.5□□□□□ -0.57
PDGFRB-203ENST00000517660 DDX12PQ92771 950 aa11.5□□□□□ -0.57
PDGFRB-203ENST00000517660 NELL1Q92832 810 aa11.5□□□□□ -0.57
PDGFRB-203ENST00000517660 NXPE3Q969Y0 559 aa11.5□□□□□ -0.57
PDGFRB-203ENST00000517660 KIF12Q96FN5 646 aa11.5□□□□□ -0.57
PDGFRB-203ENST00000517660 SUSD3Q96L08 255 aa11.5□□□□□ -0.57
PDGFRB-203ENST00000517660 MYADMQ96S97 322 aa11.5□□□□□ -0.57
PDGFRB-203ENST00000517660 MSTO1Q9BUK6 570 aa11.5□□□□□ -0.57
PDGFRB-203ENST00000517660 RPF1Q9H9Y2 349 aaKnown RBP11.5□□□□□ -0.57
PDGFRB-203ENST00000517660 USP18Q9UMW8 372 aa11.5□□□□□ -0.57
PDGFRB-203ENST00000517660 UBQLN1Q9UMX0 589 aaKnown RBP11.5□□□□□ -0.57
PDGFRB-203ENST00000517660 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.5□□□□□ -0.57
PDGFRB-203ENST00000517660 LOC400499M0QZD8 3231 aa11.49□□□□□ -0.57
PDGFRB-203ENST00000517660 MYMKA6NI61 221 aa11.49□□□□□ -0.57
PDGFRB-203ENST00000517660 CCL16O15467 120 aa11.49□□□□□ -0.57
PDGFRB-203ENST00000517660 XPOTO43592 962 aaKnown RBP11.49□□□□□ -0.57
PDGFRB-203ENST00000517660 FAM189A1O60320 539 aa11.49□□□□□ -0.57
PDGFRB-203ENST00000517660 TBC1D4O60343 1298 aa11.49□□□□□ -0.57
PDGFRB-203ENST00000517660 SRFP11831 508 aa11.49□□□□□ -0.57
PDGFRB-203ENST00000517660 LAMP2P13473 410 aa11.49□□□□□ -0.57
PDGFRB-203ENST00000517660 GAP43P17677 238 aa11.49□□□□□ -0.57
PDGFRB-203ENST00000517660 FSHRP23945 695 aa11.49□□□□□ -0.57
PDGFRB-203ENST00000517660 ELF1P32519 619 aa11.49□□□□□ -0.57
PDGFRB-203ENST00000517660 MCM4P33991 863 aa11.49□□□□□ -0.57
PDGFRB-203ENST00000517660 TNFSF9P41273 254 aa11.49□□□□□ -0.57
PDGFRB-203ENST00000517660 SHC2P98077 582 aa11.49□□□□□ -0.57
PDGFRB-203ENST00000517660 PPP2R3AQ06190 1150 aa11.49□□□□□ -0.57
PDGFRB-203ENST00000517660 SPAG1Q07617 926 aa11.49□□□□□ -0.57
PDGFRB-203ENST00000517660 STK38Q15208 465 aa11.49□□□□□ -0.57
PDGFRB-203ENST00000517660 ENOX2Q16206 610 aaKnown RBP11.49□□□□□ -0.57
PDGFRB-203ENST00000517660 ZC2HC1CQ53FD0 456 aaPredicted RBP11.49□□□□□ -0.57
PDGFRB-203ENST00000517660 ZBTB41Q5SVQ8 909 aa11.49□□□□□ -0.57
PDGFRB-203ENST00000517660 SLFN12LQ6IEE8 588 aa11.49□□□□□ -0.57
PDGFRB-203ENST00000517660 SLC39A4Q6P5W5 647 aa11.49□□□□□ -0.57
PDGFRB-203ENST00000517660 GRASPQ7Z6J2 395 aaPredicted RBP11.49□□□□□ -0.57
PDGFRB-203ENST00000517660 HSCBQ8IWL3 235 aa11.49□□□□□ -0.57
PDGFRB-203ENST00000517660 LINC00301Q8NCQ3 95 aa11.49□□□□□ -0.57
PDGFRB-203ENST00000517660 ZNF461Q8TAF7 563 aa11.49□□□□□ -0.57
PDGFRB-203ENST00000517660 SLC7A14Q8TBB6 771 aa11.49□□□□□ -0.57
PDGFRB-203ENST00000517660 HVCN1Q96D96 273 aa11.49□□□□□ -0.57
PDGFRB-203ENST00000517660 ZNF396Q96N95 335 aaPredicted RBP11.49□□□□□ -0.57
PDGFRB-203ENST00000517660 PANK2Q9BZ23 570 aa11.49□□□□□ -0.57
PDGFRB-203ENST00000517660 SEL1LQ9UBV2 794 aa11.49□□□□□ -0.57
PDGFRB-203ENST00000517660 TUBGCP4Q9UGJ1 667 aa11.49□□□□□ -0.57
PDGFRB-203ENST00000517660 FBXL5Q9UKA1 691 aa11.49□□□□□ -0.57
PDGFRB-203ENST00000517660 CPSF3Q9UKF6 684 aaKnown RBP11.49□□□□□ -0.57
PDGFRB-203ENST00000517660 ANGPTL2Q9UKU9 493 aa11.49□□□□□ -0.57
PDGFRB-203ENST00000517660 PCDHB8Q9UN66 801 aa11.49□□□□□ -0.57
PDGFRB-203ENST00000517660 STYXL1Q9Y6J8 313 aa11.49□□□□□ -0.57
PDGFRB-203ENST00000517660 ZFP37Q9Y6Q3 630 aaPredicted RBP11.49□□□□□ -0.57
PDGFRB-203ENST00000517660 CACNA1IQ9P0X4 2223 aa11.48□□□□□ -0.57
PDGFRB-203ENST00000517660 ANKRD63C9JTQ0 380 aa11.48□□□□□ -0.57
PDGFRB-203ENST00000517660 SPTLC2O15270 562 aa11.48□□□□□ -0.57
PDGFRB-203ENST00000517660 ABLIM3O94929 683 aa11.48□□□□□ -0.57
PDGFRB-203ENST00000517660 STAT6P42226 847 aa11.48□□□□□ -0.57
PDGFRB-203ENST00000517660 ARPP19P56211 112 aa11.48□□□□□ -0.57
PDGFRB-203ENST00000517660 POU5F1Q01860 360 aaKnown RBP11.48□□□□□ -0.57
PDGFRB-203ENST00000517660 POSTNQ15063 836 aa11.48□□□□□ -0.57
PDGFRB-203ENST00000517660 CTXN3Q4LDR2 81 aa11.48□□□□□ -0.57
PDGFRB-203ENST00000517660 TPGS2Q68CL5 300 aa11.48□□□□□ -0.57
PDGFRB-203ENST00000517660 ADALQ6DHV7 355 aa11.48□□□□□ -0.57
PDGFRB-203ENST00000517660 GET4Q7L5D6 327 aaPredicted RBP11.48□□□□□ -0.57
PDGFRB-203ENST00000517660 SFR1Q86XK3 245 aa11.48□□□□□ -0.57
PDGFRB-203ENST00000517660 DNAJC19Q96DA6 116 aa11.48□□□□□ -0.57
PDGFRB-203ENST00000517660 STRA6Q9BX79 667 aa11.48□□□□□ -0.57
PDGFRB-203ENST00000517660 MRPL44Q9H9J2 332 aaKnown RBP11.48□□□□□ -0.57
PDGFRB-203ENST00000517660 ARHGEF3Q9NR81 526 aa11.48□□□□□ -0.57
PDGFRB-203ENST00000517660 TFIP11Q9UBB9 837 aaKnown RBP11.48□□□□□ -0.57
PDGFRB-203ENST00000517660 FBXO4Q9UKT5 387 aa11.48□□□□□ -0.57
PDGFRB-203ENST00000517660 CDH7Q9ULB5 785 aa11.48□□□□□ -0.57
PDGFRB-203ENST00000517660 POLIQ9UNA4 740 aa11.48□□□□□ -0.57
PDGFRB-203ENST00000517660 EXOC7Q9UPT5 735 aa11.48□□□□□ -0.57
PDGFRB-203ENST00000517660 PCDHGA2Q9Y5H1 932 aa11.48□□□□□ -0.57
PDGFRB-203ENST00000517660 PATJQ8NI35 1801 aa11.48□□□□□ -0.57
PDGFRB-203ENST00000517660 TDRD15B5MCY1 1934 aaKnown RBP11.48□□□□□ -0.57
PDGFRB-203ENST00000517660 CEP295Q9C0D2 2601 aa11.47□□□□□ -0.57
PDGFRB-203ENST00000517660 C2orf16Q68DN1 1984 aa11.47□□□□□ -0.57
PDGFRB-203ENST00000517660 ARHGEF37A1IGU5 675 aa11.47□□□□□ -0.57
PDGFRB-203ENST00000517660 ANHXE9PGG2 379 aa11.47□□□□□ -0.57
PDGFRB-203ENST00000517660 M0QZQ0 153 aa11.47□□□□□ -0.57
PDGFRB-203ENST00000517660 PPP6R2O75170 966 aa11.47□□□□□ -0.57
PDGFRB-203ENST00000517660 PPP1R37O75864 691 aa11.47□□□□□ -0.57
PDGFRB-203ENST00000517660 PROS1P07225 676 aa11.47□□□□□ -0.57
PDGFRB-203ENST00000517660 HSP90AA1P07900 732 aaKnown RBP11.47□□□□□ -0.57
PDGFRB-203ENST00000517660 ATF2P15336 505 aa11.47□□□□□ -0.57
PDGFRB-203ENST00000517660 PAX3P23760 479 aa11.47□□□□□ -0.57
PDGFRB-203ENST00000517660 NTHL1P78549 312 aa11.47□□□□□ -0.57
PDGFRB-203ENST00000517660 ROR1Q01973 937 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms