RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 ECHS1P30084 290 aa-0.51□□□□□ -2.49
SNORA40.16-201ENST00000517238 CHN2P52757 468 aa-0.51□□□□□ -2.49
SNORA40.16-201ENST00000517238 P2RX3P56373 397 aa-0.51□□□□□ -2.49
SNORA40.16-201ENST00000517238 HABP2Q14520 560 aaPredicted RBP-0.51□□□□□ -2.49
SNORA40.16-201ENST00000517238 CERKLQ49MI3 558 aaPredicted RBP-0.51□□□□□ -2.49
SNORA40.16-201ENST00000517238 ANO6Q4KMQ2 910 aa-0.51□□□□□ -2.49
SNORA40.16-201ENST00000517238 TCTEX1D4Q5JR98 221 aa-0.51□□□□□ -2.49
SNORA40.16-201ENST00000517238 MEX3CQ5U5Q3 659 aaKnown RBP-0.51□□□□□ -2.49
SNORA40.16-201ENST00000517238 GTF2IRD2BQ6EKJ0 949 aa-0.51□□□□□ -2.49
SNORA40.16-201ENST00000517238 KCTD1Q719H9 257 aa-0.51□□□□□ -2.49
SNORA40.16-201ENST00000517238 LRRTM1Q86UE6 522 aa-0.51□□□□□ -2.49
SNORA40.16-201ENST00000517238 GTF2IRD2Q86UP8 949 aa-0.51□□□□□ -2.49
SNORA40.16-201ENST00000517238 UHMK1Q8TAS1 419 aaKnown RBP-0.51□□□□□ -2.49
SNORA40.16-201ENST00000517238 ZPLD1Q8TCW7 415 aa-0.51□□□□□ -2.49
SNORA40.16-201ENST00000517238 RPGRQ92834 1020 aaKnown RBP-0.51□□□□□ -2.49
SNORA40.16-201ENST00000517238 COPS5Q92905 334 aa-0.51□□□□□ -2.49
SNORA40.16-201ENST00000517238 RNF34Q969K3 372 aa-0.51□□□□□ -2.49
SNORA40.16-201ENST00000517238 IL17RAQ96F46 866 aa-0.51□□□□□ -2.49
SNORA40.16-201ENST00000517238 C1orf159Q96HA4 380 aa-0.51□□□□□ -2.49
SNORA40.16-201ENST00000517238 PGBD1Q96JS3 809 aa-0.51□□□□□ -2.49
SNORA40.16-201ENST00000517238 SLC25A33Q9BSK2 321 aa-0.51□□□□□ -2.49
SNORA40.16-201ENST00000517238 TRIM15Q9C019 465 aa-0.51□□□□□ -2.49
SNORA40.16-201ENST00000517238 SEMA4BQ9NPR2 832 aaPredicted RBP-0.51□□□□□ -2.49
SNORA40.16-201ENST00000517238 MYO6Q9UM54 1294 aa-0.51□□□□□ -2.49
SNORA40.16-201ENST00000517238 MAST4O15021 2626 aa-0.52□□□□□ -2.49
SNORA40.16-201ENST00000517238 A0A0J9YWU9 116 aa-0.52□□□□□ -2.49
SNORA40.16-201ENST00000517238 DAPK3O43293 454 aa-0.52□□□□□ -2.49
SNORA40.16-201ENST00000517238 ZNF354AO60765 605 aaPredicted RBP-0.52□□□□□ -2.49
SNORA40.16-201ENST00000517238 USP1O94782 785 aa-0.52□□□□□ -2.49
SNORA40.16-201ENST00000517238 ZBTB11O95625 1053 aaPredicted RBP-0.52□□□□□ -2.49
SNORA40.16-201ENST00000517238 F13A1P00488 732 aa-0.52□□□□□ -2.49
SNORA40.16-201ENST00000517238 AMBPP02760 352 aa-0.52□□□□□ -2.49
SNORA40.16-201ENST00000517238 ITGAVP06756 1048 aa-0.52□□□□□ -2.49
SNORA40.16-201ENST00000517238 SNRNP70P08621 437 aaKnown RBP-0.52□□□□□ -2.49
SNORA40.16-201ENST00000517238 CD99P14209 185 aa-0.52□□□□□ -2.49
SNORA40.16-201ENST00000517238 HOXB2P14652 356 aa-0.52□□□□□ -2.49
SNORA40.16-201ENST00000517238 FGFR4P22455 802 aa-0.52□□□□□ -2.49
SNORA40.16-201ENST00000517238 CASRP41180 1078 aa-0.52□□□□□ -2.49
SNORA40.16-201ENST00000517238 HOXA1P49639 335 aaPredicted RBP-0.52□□□□□ -2.49
SNORA40.16-201ENST00000517238 NR0B1P51843 470 aaKnown RBP-0.52□□□□□ -2.49
SNORA40.16-201ENST00000517238 PMS1P54277 932 aaKnown RBP-0.52□□□□□ -2.49
SNORA40.16-201ENST00000517238 HSD11B2P80365 405 aa-0.52□□□□□ -2.49
SNORA40.16-201ENST00000517238 FPGSQ05932 587 aa-0.52□□□□□ -2.49
SNORA40.16-201ENST00000517238 GRB10Q13322 594 aa-0.52□□□□□ -2.49
SNORA40.16-201ENST00000517238 MRPL49Q13405 166 aaKnown RBP-0.52□□□□□ -2.49
SNORA40.16-201ENST00000517238 MTX1Q13505 466 aa-0.52□□□□□ -2.49
SNORA40.16-201ENST00000517238 FAM189A2Q15884 450 aa-0.52□□□□□ -2.49
SNORA40.16-201ENST00000517238 GEN1Q17RS7 908 aa-0.52□□□□□ -2.49
SNORA40.16-201ENST00000517238 RNF212Q495C1 297 aa-0.52□□□□□ -2.49
SNORA40.16-201ENST00000517238 FOXR2Q6PJQ5 311 aa-0.52□□□□□ -2.49
SNORA40.16-201ENST00000517238 TRMT1LQ7Z2T5 733 aaKnown RBP-0.52□□□□□ -2.49
SNORA40.16-201ENST00000517238 PARP8Q8N3A8 854 aa-0.52□□□□□ -2.49
SNORA40.16-201ENST00000517238 NFAM1Q8NET5 270 aaPredicted RBP-0.52□□□□□ -2.49
SNORA40.16-201ENST00000517238 PHF10Q8WUB8 498 aaKnown RBP-0.52□□□□□ -2.49
SNORA40.16-201ENST00000517238 TBC1D5Q92609 795 aa-0.52□□□□□ -2.49
SNORA40.16-201ENST00000517238 TFAP2CQ92754 450 aa-0.52□□□□□ -2.49
SNORA40.16-201ENST00000517238 RITA1Q96K30 269 aa-0.52□□□□□ -2.49
SNORA40.16-201ENST00000517238 SLC46A1Q96NT5 459 aa-0.52□□□□□ -2.49
SNORA40.16-201ENST00000517238 JAM3Q9BX67 310 aa-0.52□□□□□ -2.49
SNORA40.16-201ENST00000517238 AMNQ9BXJ7 453 aa-0.52□□□□□ -2.49
SNORA40.16-201ENST00000517238 RNPEPQ9H4A4 650 aa-0.52□□□□□ -2.49
SNORA40.16-201ENST00000517238 RIC8BQ9NVN3 520 aa-0.52□□□□□ -2.49
SNORA40.16-201ENST00000517238 UCKL1Q9NWZ5 548 aa-0.52□□□□□ -2.49
SNORA40.16-201ENST00000517238 CGGBP1Q9UFW8 167 aaPredicted RBP-0.52□□□□□ -2.49
SNORA40.16-201ENST00000517238 TLR6Q9Y2C9 796 aa-0.52□□□□□ -2.49
SNORA40.16-201ENST00000517238 DSTQ03001 7570 aaKnown RBP-0.52□□□□□ -2.49
SNORA40.16-201ENST00000517238 COL5A1P20908 1838 aaPredicted RBP-0.52□□□□□ -2.49
SNORA40.16-201ENST00000517238 AATKQ6ZMQ8 1374 aa-0.53□□□□□ -2.49
SNORA40.16-201ENST00000517238 SRRM4A7MD48 611 aaKnown RBP-0.53□□□□□ -2.49
SNORA40.16-201ENST00000517238 GPR182O15218 404 aa-0.53□□□□□ -2.49
SNORA40.16-201ENST00000517238 MTSS1O43312 755 aa-0.53□□□□□ -2.49
SNORA40.16-201ENST00000517238 CNOT3O75175 753 aaKnown RBP-0.53□□□□□ -2.49
SNORA40.16-201ENST00000517238 ERN1O75460 977 aaKnown RBP-0.53□□□□□ -2.49
SNORA40.16-201ENST00000517238 FGF2P09038 288 aa-0.53□□□□□ -2.49
SNORA40.16-201ENST00000517238 SRGNP10124 158 aa-0.53□□□□□ -2.49
SNORA40.16-201ENST00000517238 NR2F6P10588 404 aa-0.53□□□□□ -2.49
SNORA40.16-201ENST00000517238 CTSAP10619 480 aa-0.53□□□□□ -2.49
SNORA40.16-201ENST00000517238 ALAS1P13196 640 aa-0.53□□□□□ -2.49
SNORA40.16-201ENST00000517238 NME1P15531 152 aaKnown RBP-0.53□□□□□ -2.49
SNORA40.16-201ENST00000517238 ACADSP16219 412 aa-0.53□□□□□ -2.49
SNORA40.16-201ENST00000517238 MGMTP16455 207 aa-0.53□□□□□ -2.49
SNORA40.16-201ENST00000517238 ATP2B4P23634 1241 aa-0.53□□□□□ -2.49
SNORA40.16-201ENST00000517238 AOAHP28039 575 aa-0.53□□□□□ -2.49
SNORA40.16-201ENST00000517238 PDLIM4P50479 330 aa-0.53□□□□□ -2.49
SNORA40.16-201ENST00000517238 LUMP51884 338 aaPredicted RBP-0.53□□□□□ -2.49
SNORA40.16-201ENST00000517238 KCNAB2Q13303 367 aa-0.53□□□□□ -2.49
SNORA40.16-201ENST00000517238 TMEM30BQ3MIR4 351 aa-0.53□□□□□ -2.49
SNORA40.16-201ENST00000517238 RBM20Q5T481 1227 aaKnown RBP-0.53□□□□□ -2.49
SNORA40.16-201ENST00000517238 BTBD8Q5XKL5 378 aa-0.53□□□□□ -2.49
SNORA40.16-201ENST00000517238 TBC1D9BQ66K14 1250 aa-0.53□□□□□ -2.49
SNORA40.16-201ENST00000517238 DEF8Q6ZN54 512 aa-0.53□□□□□ -2.49
SNORA40.16-201ENST00000517238 RFX8Q6ZV50 586 aa-0.53□□□□□ -2.49
SNORA40.16-201ENST00000517238 OTOP3Q7RTS5 596 aa-0.53□□□□□ -2.49
SNORA40.16-201ENST00000517238 REC114Q7Z4M0 266 aa-0.53□□□□□ -2.49
SNORA40.16-201ENST00000517238 ZNF804AQ7Z570 1209 aa-0.53□□□□□ -2.49
SNORA40.16-201ENST00000517238 CCDC84Q86UT8 332 aaPredicted RBP-0.53□□□□□ -2.49
SNORA40.16-201ENST00000517238 CCDC103Q8IW40 242 aa-0.53□□□□□ -2.49
SNORA40.16-201ENST00000517238 TMEM199Q8N511 208 aa-0.53□□□□□ -2.49
SNORA40.16-201ENST00000517238 SRBD1Q8N5C6 995 aaKnown RBP-0.53□□□□□ -2.49
SNORA40.16-201ENST00000517238 TMC1Q8TDI8 760 aa-0.53□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms