RNA–Protein interactions for RNA: ENST00000516768.1

SCARNA20-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20-201ENST00000516768 ADAMTS19Q8TE59 1207 aa12.05□□□□□ -0.48
SCARNA20-201ENST00000516768 SENP8Q96LD8 212 aa12.05□□□□□ -0.48
SCARNA20-201ENST00000516768 POP1Q99575 1024 aaKnown RBP12.05□□□□□ -0.48
SCARNA20-201ENST00000516768 PRKAG3Q9UGI9 489 aa12.05□□□□□ -0.48
SCARNA20-201ENST00000516768 AGAP1Q9UPQ3 857 aa12.05□□□□□ -0.48
SCARNA20-201ENST00000516768 USP15Q9Y4E8 981 aaPredicted RBP12.05□□□□□ -0.48
SCARNA20-201ENST00000516768 SPTBN5Q9NRC6 3674 aaKnown RBP12.05□□□□□ -0.48
SCARNA20-201ENST00000516768 VCANP13611 3396 aa12.04□□□□□ -0.48
SCARNA20-201ENST00000516768 CCDC195A0A1B0GUA6 201 aa12.04□□□□□ -0.48
SCARNA20-201ENST00000516768 KPNA7A9QM74 516 aa12.04□□□□□ -0.48
SCARNA20-201ENST00000516768 DLL1O00548 723 aa12.04□□□□□ -0.48
SCARNA20-201ENST00000516768 CALUO43852 315 aaPredicted RBP12.04□□□□□ -0.48
SCARNA20-201ENST00000516768 ABLIM3O94929 683 aa12.04□□□□□ -0.48
SCARNA20-201ENST00000516768 PAPLNO95428 1278 aa12.04□□□□□ -0.48
SCARNA20-201ENST00000516768 CST3P01034 146 aaPredicted RBP12.04□□□□□ -0.48
SCARNA20-201ENST00000516768 NR3C1P04150 777 aa12.04□□□□□ -0.48
SCARNA20-201ENST00000516768 TYMPP19971 482 aa12.04□□□□□ -0.48
SCARNA20-201ENST00000516768 PNPLA4P41247 253 aa12.04□□□□□ -0.48
SCARNA20-201ENST00000516768 TAF6P49848 677 aa12.04□□□□□ -0.48
SCARNA20-201ENST00000516768 CLDN10P78369 228 aa12.04□□□□□ -0.48
SCARNA20-201ENST00000516768 RBP5P82980 135 aa12.04□□□□□ -0.48
SCARNA20-201ENST00000516768 UVSSAQ2YD98 709 aa12.04□□□□□ -0.48
SCARNA20-201ENST00000516768 ATAT1Q5SQI0 421 aa12.04□□□□□ -0.48
SCARNA20-201ENST00000516768 CENPPQ6IPU0 288 aa12.04□□□□□ -0.48
SCARNA20-201ENST00000516768 CES5AQ6NT32 575 aa12.04□□□□□ -0.48
SCARNA20-201ENST00000516768 ELMSAN1Q6PJG2 1045 aa12.04□□□□□ -0.48
SCARNA20-201ENST00000516768 WDR49Q8IV35 697 aa12.04□□□□□ -0.48
SCARNA20-201ENST00000516768 KREMEN2Q8NCW0 462 aa12.04□□□□□ -0.48
SCARNA20-201ENST00000516768 OR5B17Q8NGF7 314 aa12.04□□□□□ -0.48
SCARNA20-201ENST00000516768 PARD3BQ8TEW8 1205 aa12.04□□□□□ -0.48
SCARNA20-201ENST00000516768 ZNF516Q92618 1163 aa12.04□□□□□ -0.48
SCARNA20-201ENST00000516768 ANKRD36BP1Q96IX9 119 aa12.04□□□□□ -0.48
SCARNA20-201ENST00000516768 FNBP1Q96RU3 617 aa12.04□□□□□ -0.48
SCARNA20-201ENST00000516768 APOL5Q9BWW9 433 aa12.04□□□□□ -0.48
SCARNA20-201ENST00000516768 OXCT2Q9BYC2 517 aaPredicted RBP12.04□□□□□ -0.48
SCARNA20-201ENST00000516768 GZF1Q9H116 711 aaPredicted RBP12.04□□□□□ -0.48
SCARNA20-201ENST00000516768 SIX4Q9UIU6 781 aa12.04□□□□□ -0.48
SCARNA20-201ENST00000516768 FBXL5Q9UKA1 691 aa12.04□□□□□ -0.48
SCARNA20-201ENST00000516768 ITGA11Q9UKX5 1188 aa12.04□□□□□ -0.48
SCARNA20-201ENST00000516768 TIMM13Q9Y5L4 95 aaPredicted RBP12.04□□□□□ -0.48
SCARNA20-201ENST00000516768 CDY1Q9Y6F8 540 aa12.04□□□□□ -0.48
SCARNA20-201ENST00000516768 CYB561D2O14569 222 aa12.03□□□□□ -0.48
SCARNA20-201ENST00000516768 MAPK13O15264 365 aa12.03□□□□□ -0.48
SCARNA20-201ENST00000516768 ITGB3P05106 788 aa12.03□□□□□ -0.48
SCARNA20-201ENST00000516768 CYP11A1P05108 521 aa12.03□□□□□ -0.48
SCARNA20-201ENST00000516768 TMEM191BP0C7N4 346 aa12.03□□□□□ -0.48
SCARNA20-201ENST00000516768 DLATP10515 647 aaKnown RBP12.03□□□□□ -0.48
SCARNA20-201ENST00000516768 TNNI1P19237 187 aa12.03□□□□□ -0.48
SCARNA20-201ENST00000516768 RPL13P26373 211 aaKnown RBP12.03□□□□□ -0.48
SCARNA20-201ENST00000516768 CASP4P49662 377 aa12.03□□□□□ -0.48
SCARNA20-201ENST00000516768 MCCD1P59942 119 aaPredicted RBP12.03□□□□□ -0.48
SCARNA20-201ENST00000516768 YWHAHQ04917 246 aaPredicted RBP12.03□□□□□ -0.48
SCARNA20-201ENST00000516768 ADAM9Q13443 819 aa12.03□□□□□ -0.48
SCARNA20-201ENST00000516768 CBX2Q14781 532 aaPredicted RBP12.03□□□□□ -0.48
SCARNA20-201ENST00000516768 CTXN3Q4LDR2 81 aa12.03□□□□□ -0.48
SCARNA20-201ENST00000516768 ZCWPW2Q504Y3 356 aa12.03□□□□□ -0.48
SCARNA20-201ENST00000516768 RARS2Q5T160 578 aaKnown RBP12.03□□□□□ -0.48
SCARNA20-201ENST00000516768 LMBRD2Q68DH5 695 aaPredicted RBP12.03□□□□□ -0.48
SCARNA20-201ENST00000516768 TMC5Q6UXY8 1006 aa12.03□□□□□ -0.48
SCARNA20-201ENST00000516768 CYP26C1Q6V0L0 522 aa12.03□□□□□ -0.48
SCARNA20-201ENST00000516768 C15orf39Q6ZRI6 1047 aa12.03□□□□□ -0.48
SCARNA20-201ENST00000516768 RTL10Q7L3V2 364 aa12.03□□□□□ -0.48
SCARNA20-201ENST00000516768 TRAPPC11Q7Z392 1133 aa12.03□□□□□ -0.48
SCARNA20-201ENST00000516768 GPR149Q86SP6 731 aa12.03□□□□□ -0.48
SCARNA20-201ENST00000516768 USP37Q86T82 979 aa12.03□□□□□ -0.48
SCARNA20-201ENST00000516768 ADHFE1Q8IWW8 467 aa12.03□□□□□ -0.48
SCARNA20-201ENST00000516768 SMYD4Q8IYR2 804 aaPredicted RBP12.03□□□□□ -0.48
SCARNA20-201ENST00000516768 ADSSL1Q8N142 457 aa12.03□□□□□ -0.48
SCARNA20-201ENST00000516768 LRRC52Q8N7C0 313 aa12.03□□□□□ -0.48
SCARNA20-201ENST00000516768 CMASQ8NFW8 434 aaPredicted RBP12.03□□□□□ -0.48
SCARNA20-201ENST00000516768 CCDC127Q96BQ5 260 aa12.03□□□□□ -0.48
SCARNA20-201ENST00000516768 UHRF1Q96T88 793 aaPredicted RBP12.03□□□□□ -0.48
SCARNA20-201ENST00000516768 RHOBTB2Q9BYZ6 727 aa12.03□□□□□ -0.48
SCARNA20-201ENST00000516768 MTMR12Q9C0I1 747 aa12.03□□□□□ -0.48
SCARNA20-201ENST00000516768 SFXN1Q9H9B4 322 aa12.03□□□□□ -0.48
SCARNA20-201ENST00000516768 MAN1C1Q9NR34 630 aa12.03□□□□□ -0.48
SCARNA20-201ENST00000516768 FRMD4BQ9Y2L6 1034 aa12.03□□□□□ -0.48
SCARNA20-201ENST00000516768 PTPRJQ12913 1337 aa12.03□□□□□ -0.48
SCARNA20-201ENST00000516768 TCF20Q9UGU0 1960 aaKnown RBP12.03□□□□□ -0.48
SCARNA20-201ENST00000516768 PDCD11Q14690 1871 aaKnown RBP12.02□□□□□ -0.48
SCARNA20-201ENST00000516768 ARHGEF37A1IGU5 675 aa12.02□□□□□ -0.49
SCARNA20-201ENST00000516768 C19orf67A6NJJ6 358 aa12.02□□□□□ -0.49
SCARNA20-201ENST00000516768 IKBKBO14920 756 aa12.02□□□□□ -0.49
SCARNA20-201ENST00000516768 ZMYND10O75800 440 aa12.02□□□□□ -0.49
SCARNA20-201ENST00000516768 TNNC2P02585 160 aa12.02□□□□□ -0.49
SCARNA20-201ENST00000516768 KRT19P08727 400 aa12.02□□□□□ -0.49
SCARNA20-201ENST00000516768 ATF2P15336 505 aa12.02□□□□□ -0.49
SCARNA20-201ENST00000516768 BMP6P22004 513 aa12.02□□□□□ -0.49
SCARNA20-201ENST00000516768 POLR2BP30876 1174 aaKnown RBP12.02□□□□□ -0.49
SCARNA20-201ENST00000516768 MTHFRP42898 656 aa12.02□□□□□ -0.49
SCARNA20-201ENST00000516768 EDRF1Q3B7T1 1238 aa12.02□□□□□ -0.49
SCARNA20-201ENST00000516768 SV2CQ496J9 727 aa12.02□□□□□ -0.49
SCARNA20-201ENST00000516768 TPGS2Q68CL5 300 aa12.02□□□□□ -0.49
SCARNA20-201ENST00000516768 ISM2Q6H9L7 571 aa12.02□□□□□ -0.49
SCARNA20-201ENST00000516768 OVOS1Q6IE37 1185 aa12.02□□□□□ -0.49
SCARNA20-201ENST00000516768 FEZF2Q8TBJ5 459 aa12.02□□□□□ -0.49
SCARNA20-201ENST00000516768 PLEKHO2Q8TD55 490 aa12.02□□□□□ -0.49
SCARNA20-201ENST00000516768 TMC2Q8TDI7 906 aa12.02□□□□□ -0.49
SCARNA20-201ENST00000516768 FAM84AQ96KN4 292 aa12.02□□□□□ -0.49
SCARNA20-201ENST00000516768 RIPOR3Q96MK2 946 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms