RNA–Protein interactions for RNA: ENST00000515710.1

TRIO-223, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 1,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-223ENST00000515710 TLR10Q9BXR5 811 aa21.5■■□□□ 1.03
TRIO-223ENST00000515710 NXF3Q9H4D5 531 aaKnown RBP21.5■■□□□ 1.03
TRIO-223ENST00000515710 CHST12Q9NRB3 414 aa21.5■■□□□ 1.03
TRIO-223ENST00000515710 RECQL4O94761 1208 aa21.49■■□□□ 1.03
TRIO-223ENST00000515710 CHRNA1P02708 482 aa21.49■■□□□ 1.03
TRIO-223ENST00000515710 CKAP4Q07065 602 aaKnown RBP21.49■■□□□ 1.03
TRIO-223ENST00000515710 LRRN4CLQ8ND94 238 aa21.49■■□□□ 1.03
TRIO-223ENST00000515710 UBXN4Q92575 508 aa21.49■■□□□ 1.03
TRIO-223ENST00000515710 WNT8BQ93098 351 aa21.49■■□□□ 1.03
TRIO-223ENST00000515710 ARHGEF26Q96DR7 871 aa21.49■■□□□ 1.03
TRIO-223ENST00000515710 POLIQ9UNA4 740 aa21.49■■□□□ 1.03
TRIO-223ENST00000515710 HES2Q9Y543 173 aa21.49■■□□□ 1.03
TRIO-223ENST00000515710 THAP12O43422 761 aa21.49■■□□□ 1.03
TRIO-223ENST00000515710 WEE2P0C1S8 567 aa21.49■■□□□ 1.03
TRIO-223ENST00000515710 CD58P19256 250 aa21.49■■□□□ 1.03
TRIO-223ENST00000515710 XKR4Q5GH76 650 aa21.49■■□□□ 1.03
TRIO-223ENST00000515710 LHX8Q68G74 356 aa21.49■■□□□ 1.03
TRIO-223ENST00000515710 GLT1D1Q96MS3 346 aa21.49■■□□□ 1.03
TRIO-223ENST00000515710 OSBPL9Q96SU4 736 aa21.49■■□□□ 1.03
TRIO-223ENST00000515710 UBQLN1Q9UMX0 589 aaKnown RBP21.49■■□□□ 1.03
TRIO-223ENST00000515710 ST3GAL5Q9UNP4 418 aa21.49■■□□□ 1.03
TRIO-223ENST00000515710 CTAGE15A4D2H0 777 aa21.48■■□□□ 1.03
TRIO-223ENST00000515710 GPR182O15218 404 aa21.48■■□□□ 1.03
TRIO-223ENST00000515710 XPOTO43592 962 aaKnown RBP21.48■■□□□ 1.03
TRIO-223ENST00000515710 SRGAP2O75044 1071 aa21.48■■□□□ 1.03
TRIO-223ENST00000515710 FTCDO95954 541 aa21.48■■□□□ 1.03
TRIO-223ENST00000515710 CALCAP01258 141 aa21.48■■□□□ 1.03
TRIO-223ENST00000515710 CTAGE8P0CG41 777 aa21.48■■□□□ 1.03
TRIO-223ENST00000515710 TWF2Q6IBS0 349 aaKnown RBP21.48■■□□□ 1.03
TRIO-223ENST00000515710 SCARA5Q6ZMJ2 495 aa21.48■■□□□ 1.03
TRIO-223ENST00000515710 CTAGE6Q86UF2 777 aa21.48■■□□□ 1.03
TRIO-223ENST00000515710 CTAGE4Q8IX94 777 aa21.48■■□□□ 1.03
TRIO-223ENST00000515710 TTC39CQ8N584 583 aa21.48■■□□□ 1.03
TRIO-223ENST00000515710 ZNF606Q8WXB4 792 aa21.48■■□□□ 1.03
TRIO-223ENST00000515710 TSC1Q92574 1164 aa21.48■■□□□ 1.03
TRIO-223ENST00000515710 TRIM11Q96F44 468 aa21.48■■□□□ 1.03
TRIO-223ENST00000515710 ZMAT2Q96NC0 199 aaKnown RBP21.48■■□□□ 1.03
TRIO-223ENST00000515710 OSGEPQ9NPF4 335 aa21.48■■□□□ 1.03
TRIO-223ENST00000515710 GTF3C4Q9UKN8 822 aa21.48■■□□□ 1.03
TRIO-223ENST00000515710 IPPQ9Y573 584 aa21.48■■□□□ 1.03
TRIO-223ENST00000515710 CYP1A2P05177 515 aa21.47■■□□□ 1.03
TRIO-223ENST00000515710 THPOP40225 353 aa21.47■■□□□ 1.03
TRIO-223ENST00000515710 MYO1EQ12965 1108 aa21.47■■□□□ 1.03
TRIO-223ENST00000515710 GOLGA1Q92805 767 aa21.47■■□□□ 1.03
TRIO-223ENST00000515710 APOL6Q9BWW8 343 aa21.47■■□□□ 1.03
TRIO-223ENST00000515710 CTTNBP2NLQ9P2B4 639 aa21.47■■□□□ 1.03
TRIO-223ENST00000515710 PARP2Q9UGN5 583 aa21.47■■□□□ 1.03
TRIO-223ENST00000515710 PUF60Q9UHX1 559 aaKnown RBP21.47■■□□□ 1.03
TRIO-223ENST00000515710 RALGAPA2Q2PPJ7 1873 aa21.47■■□□□ 1.03
TRIO-223ENST00000515710 NCK2O43639 380 aa21.47■■□□□ 1.03
TRIO-223ENST00000515710 MTA2O94776 668 aa21.47■■□□□ 1.03
TRIO-223ENST00000515710 CTSHP09668 335 aa21.47■■□□□ 1.03
TRIO-223ENST00000515710 MYBL1P10243 752 aa21.47■■□□□ 1.03
TRIO-223ENST00000515710 KCNE1P15382 129 aa21.47■■□□□ 1.03
TRIO-223ENST00000515710 AKAP5P24588 427 aa21.47■■□□□ 1.03
TRIO-223ENST00000515710 GUCY2FP51841 1108 aa21.47■■□□□ 1.03
TRIO-223ENST00000515710 CENPCQ03188 943 aa21.47■■□□□ 1.03
TRIO-223ENST00000515710 RSRC2Q7L4I2 434 aaKnown RBP21.47■■□□□ 1.03
TRIO-223ENST00000515710 ARRDC4Q8NCT1 418 aa21.47■■□□□ 1.03
TRIO-223ENST00000515710 SMG8Q8ND04 991 aaKnown RBP21.47■■□□□ 1.03
TRIO-223ENST00000515710 RPGRIP1Q96KN7 1286 aa21.47■■□□□ 1.03
TRIO-223ENST00000515710 NOD1Q9Y239 953 aa21.47■■□□□ 1.03
TRIO-223ENST00000515710 CD4P01730 458 aa21.46■■□□□ 1.03
TRIO-223ENST00000515710 PAEPP09466 180 aa21.46■■□□□ 1.03
TRIO-223ENST00000515710 RBM10P98175 930 aaKnown RBP21.46■■□□□ 1.03
TRIO-223ENST00000515710 NAA30Q147X3 362 aaPredicted RBP21.46■■□□□ 1.03
TRIO-223ENST00000515710 RPS6KA1Q15418 735 aa21.46■■□□□ 1.03
TRIO-223ENST00000515710 FAM26DQ5JW98 314 aa21.46■■□□□ 1.03
TRIO-223ENST00000515710 DAAM2Q86T65 1068 aa21.46■■□□□ 1.03
TRIO-223ENST00000515710 LRRC52Q8N7C0 313 aa21.46■■□□□ 1.03
TRIO-223ENST00000515710 ZNF653Q96CK0 615 aa21.46■■□□□ 1.03
TRIO-223ENST00000515710 CYFIP2Q96F07 1278 aa21.46■■□□□ 1.03
TRIO-223ENST00000515710 ABCB6Q9NP58 842 aa21.46■■□□□ 1.03
TRIO-223ENST00000515710 UVRAGQ9P2Y5 699 aa21.46■■□□□ 1.03
TRIO-223ENST00000515710 RNF14Q9UBS8 474 aa21.46■■□□□ 1.03
TRIO-223ENST00000515710 TRIM17Q9Y577 477 aa21.46■■□□□ 1.03
TRIO-223ENST00000515710 PTCH2Q9Y6C5 1203 aa21.46■■□□□ 1.03
TRIO-223ENST00000515710 CITO14578 2027 aa21.46■■□□□ 1.03
TRIO-223ENST00000515710 TLR3O15455 904 aaKnown RBP21.45■■□□□ 1.02
TRIO-223ENST00000515710 CAND2O75155 1236 aa21.45■■□□□ 1.02
TRIO-223ENST00000515710 NSFP46459 744 aaKnown RBP21.45■■□□□ 1.02
TRIO-223ENST00000515710 TNNC1P63316 161 aa21.45■■□□□ 1.02
TRIO-223ENST00000515710 NFX1Q12986 1120 aaKnown RBP21.45■■□□□ 1.02
TRIO-223ENST00000515710 ERCC6LQ2NKX8 1250 aa21.45■■□□□ 1.02
TRIO-223ENST00000515710 PEX26Q7Z412 305 aa21.45■■□□□ 1.02
TRIO-223ENST00000515710 HACE1Q8IYU2 909 aa21.45■■□□□ 1.02
TRIO-223ENST00000515710 MCOLN2Q8IZK6 566 aa21.45■■□□□ 1.02
TRIO-223ENST00000515710 VCPIP1Q96JH7 1222 aa21.45■■□□□ 1.02
TRIO-223ENST00000515710 SDCBP2Q9H190 292 aa21.45■■□□□ 1.02
TRIO-223ENST00000515710 CXCL16Q9H2A7 254 aa21.45■■□□□ 1.02
TRIO-223ENST00000515710 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.45■■□□□ 1.02
TRIO-223ENST00000515710 COG5Q9UP83 839 aa21.45■■□□□ 1.02
TRIO-223ENST00000515710 V9GYY5 206 aaPredicted RBP21.45■■□□□ 1.02
TRIO-223ENST00000515710 SMIM28A0A1B0GU29 152 aa21.45■■□□□ 1.02
TRIO-223ENST00000515710 CES2O00748 559 aa21.45■■□□□ 1.02
TRIO-223ENST00000515710 BUB1BO60566 1050 aaPredicted RBP21.45■■□□□ 1.02
TRIO-223ENST00000515710 CYP3A5P20815 502 aa21.45■■□□□ 1.02
TRIO-223ENST00000515710 NOMO3P69849 1222 aa21.45■■□□□ 1.02
TRIO-223ENST00000515710 ZNF394Q53GI3 561 aa21.45■■□□□ 1.02
TRIO-223ENST00000515710 NAA35Q5VZE5 725 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms