RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 SLC7A5Q01650 507 aa16.48■□□□□ 0.23
THUMPD3-210ENST00000515662 FSCN1Q16658 493 aaKnown RBP16.48■□□□□ 0.23
THUMPD3-210ENST00000515662 DCAF4L1Q3SXM0 396 aa16.48■□□□□ 0.23
THUMPD3-210ENST00000515662 SCARA5Q6ZMJ2 495 aa16.48■□□□□ 0.23
THUMPD3-210ENST00000515662 CCNI2Q6ZMN8 369 aaPredicted RBP16.48■□□□□ 0.23
THUMPD3-210ENST00000515662 TMEM130Q8N3G9 435 aa16.48■□□□□ 0.23
THUMPD3-210ENST00000515662 TRPV1Q8NER1 839 aa16.48■□□□□ 0.23
THUMPD3-210ENST00000515662 ZNF606Q8WXB4 792 aa16.48■□□□□ 0.23
THUMPD3-210ENST00000515662 ALG3Q92685 438 aa16.48■□□□□ 0.23
THUMPD3-210ENST00000515662 BTBD6Q96KE9 485 aa16.48■□□□□ 0.23
THUMPD3-210ENST00000515662 POLIQ9UNA4 740 aa16.48■□□□□ 0.23
THUMPD3-210ENST00000515662 ITGB3P05106 788 aa16.48■□□□□ 0.23
THUMPD3-210ENST00000515662 AKR1A1P14550 325 aa16.48■□□□□ 0.23
THUMPD3-210ENST00000515662 DARSP14868 501 aaKnown RBP16.48■□□□□ 0.23
THUMPD3-210ENST00000515662 RRM1P23921 792 aa16.48■□□□□ 0.23
THUMPD3-210ENST00000515662 TNNC1P63316 161 aa16.48■□□□□ 0.23
THUMPD3-210ENST00000515662 TMEM132DQ14C87 1099 aa16.48■□□□□ 0.23
THUMPD3-210ENST00000515662 CATSPER4Q7RTX7 472 aa16.48■□□□□ 0.23
THUMPD3-210ENST00000515662 KRT12Q99456 494 aa16.48■□□□□ 0.23
THUMPD3-210ENST00000515662 OSMRQ99650 979 aa16.48■□□□□ 0.23
THUMPD3-210ENST00000515662 STIM2Q9P246 746 aa16.48■□□□□ 0.23
THUMPD3-210ENST00000515662 NXF1Q9UBU9 619 aaKnown RBP16.48■□□□□ 0.23
THUMPD3-210ENST00000515662 ZNF667Q5HYK9 610 aa16.47■□□□□ 0.23
THUMPD3-210ENST00000515662 PHF13Q86YI8 300 aaPredicted RBP16.47■□□□□ 0.23
THUMPD3-210ENST00000515662 UBL4BQ8N7F7 174 aa16.47■□□□□ 0.23
THUMPD3-210ENST00000515662 DNAJB3Q8WWF6 145 aa16.47■□□□□ 0.23
THUMPD3-210ENST00000515662 KRT35Q92764 455 aa16.47■□□□□ 0.23
THUMPD3-210ENST00000515662 CD101Q93033 1021 aa16.47■□□□□ 0.23
THUMPD3-210ENST00000515662 FAXDC2Q96IV6 333 aa16.47■□□□□ 0.23
THUMPD3-210ENST00000515662 HINFPQ9BQA5 517 aa16.47■□□□□ 0.23
THUMPD3-210ENST00000515662 ZSWIM1Q9BR11 485 aa16.47■□□□□ 0.23
THUMPD3-210ENST00000515662 KATNAL1Q9BW62 490 aa16.47■□□□□ 0.23
THUMPD3-210ENST00000515662 BCO2Q9BYV7 579 aa16.47■□□□□ 0.23
THUMPD3-210ENST00000515662 ARHGAP39Q9C0H5 1083 aa16.47■□□□□ 0.23
THUMPD3-210ENST00000515662 C2CD2Q9Y426 696 aa16.47■□□□□ 0.23
THUMPD3-210ENST00000515662 MAP2K7O14733 419 aa16.46■□□□□ 0.23
THUMPD3-210ENST00000515662 POLR3GO15318 223 aaPredicted RBP16.46■□□□□ 0.23
THUMPD3-210ENST00000515662 TREHO43280 583 aa16.46■□□□□ 0.23
THUMPD3-210ENST00000515662 NPTXRO95502 500 aa16.46■□□□□ 0.23
THUMPD3-210ENST00000515662 YWHAEP62258 255 aaKnown RBP16.46■□□□□ 0.23
THUMPD3-210ENST00000515662 ZNF200P98182 395 aaPredicted RBP16.46■□□□□ 0.23
THUMPD3-210ENST00000515662 PURAQ00577 322 aaKnown RBP16.46■□□□□ 0.23
THUMPD3-210ENST00000515662 PCBP1Q15365 356 aaKnown RBP eCLIP16.46■□□□□ 0.23
THUMPD3-210ENST00000515662 WDR72Q3MJ13 1102 aa16.46■□□□□ 0.23
THUMPD3-210ENST00000515662 MAP9Q49MG5 647 aa16.46■□□□□ 0.23
THUMPD3-210ENST00000515662 ZNF394Q53GI3 561 aa16.46■□□□□ 0.23
THUMPD3-210ENST00000515662 PPP1R2P3Q6NXS1 205 aa16.46■□□□□ 0.23
THUMPD3-210ENST00000515662 HDXQ7Z353 690 aa16.46■□□□□ 0.23
THUMPD3-210ENST00000515662 VCPIP1Q96JH7 1222 aa16.46■□□□□ 0.23
THUMPD3-210ENST00000515662 HHIPL1Q96JK4 782 aa16.46■□□□□ 0.23
THUMPD3-210ENST00000515662 AP1M1Q9BXS5 423 aa16.46■□□□□ 0.23
THUMPD3-210ENST00000515662 WNT8AQ9H1J5 351 aa16.46■□□□□ 0.23
THUMPD3-210ENST00000515662 KRIT1O00522 736 aa16.46■□□□□ 0.23
THUMPD3-210ENST00000515662 DUSP11O75319 330 aaKnown RBP16.46■□□□□ 0.23
THUMPD3-210ENST00000515662 MYBL2P10244 700 aa16.46■□□□□ 0.23
THUMPD3-210ENST00000515662 BRD2P25440 801 aaKnown RBP16.46■□□□□ 0.23
THUMPD3-210ENST00000515662 ATICP31939 592 aa16.46■□□□□ 0.23
THUMPD3-210ENST00000515662 PSMC4P43686 418 aa16.46■□□□□ 0.23
THUMPD3-210ENST00000515662 PEX5P50542 639 aa16.46■□□□□ 0.23
THUMPD3-210ENST00000515662 FCGRTP55899 365 aa16.46■□□□□ 0.23
THUMPD3-210ENST00000515662 C2CD6Q53TS8 623 aa16.46■□□□□ 0.23
THUMPD3-210ENST00000515662 SLC27A1Q6PCB7 646 aa16.46■□□□□ 0.23
THUMPD3-210ENST00000515662 APBB1IPQ7Z5R6 666 aaPredicted RBP16.46■□□□□ 0.23
THUMPD3-210ENST00000515662 CPNE8Q86YQ8 564 aa16.46■□□□□ 0.23
THUMPD3-210ENST00000515662 RNPC3Q96LT9 517 aaKnown RBP16.46■□□□□ 0.23
THUMPD3-210ENST00000515662 C11orf70Q9BRQ4 267 aa16.46■□□□□ 0.23
THUMPD3-210ENST00000515662 VRTNQ9H8Y1 702 aa16.46■□□□□ 0.23
THUMPD3-210ENST00000515662 ADAM22Q9P0K1 906 aa16.46■□□□□ 0.23
THUMPD3-210ENST00000515662 FGGP02679 453 aa16.45■□□□□ 0.22
THUMPD3-210ENST00000515662 EIF4BP23588 611 aaKnown RBP16.45■□□□□ 0.22
THUMPD3-210ENST00000515662 MARCKSL1P49006 195 aa16.45■□□□□ 0.22
THUMPD3-210ENST00000515662 PTP4A2Q12974 167 aa16.45■□□□□ 0.22
THUMPD3-210ENST00000515662 LIN9Q5TKA1 542 aa16.45■□□□□ 0.22
THUMPD3-210ENST00000515662 LLGL2Q6P1M3 1020 aa16.45■□□□□ 0.22
THUMPD3-210ENST00000515662 PHLDB2Q86SQ0 1253 aa16.45■□□□□ 0.22
THUMPD3-210ENST00000515662 NT5DC4Q86YG4 428 aa16.45■□□□□ 0.22
THUMPD3-210ENST00000515662 CD302Q8IX05 232 aa16.45■□□□□ 0.22
THUMPD3-210ENST00000515662 KLHL7Q8IXQ5 586 aa16.45■□□□□ 0.22
THUMPD3-210ENST00000515662 ANAPC7Q9UJX3 599 aa16.45■□□□□ 0.22
THUMPD3-210ENST00000515662 C17orf102A2RUQ5 167 aa16.45■□□□□ 0.22
THUMPD3-210ENST00000515662 MYADML2A6NDP7 307 aa16.45■□□□□ 0.22
THUMPD3-210ENST00000515662 TMEM88BA6NKF7 163 aa16.45■□□□□ 0.22
THUMPD3-210ENST00000515662 CCDC188H7C350 402 aa16.45■□□□□ 0.22
THUMPD3-210ENST00000515662 LSM8O95777 96 aaKnown RBP16.45■□□□□ 0.22
THUMPD3-210ENST00000515662 ITGA4P13612 1032 aa16.45■□□□□ 0.22
THUMPD3-210ENST00000515662 HOXC8P31273 242 aa16.45■□□□□ 0.22
THUMPD3-210ENST00000515662 RAP1GAPP47736 663 aa16.45■□□□□ 0.22
THUMPD3-210ENST00000515662 C1QBPQ07021 282 aaKnown RBP16.45■□□□□ 0.22
THUMPD3-210ENST00000515662 ZNF211Q13398 564 aaPredicted RBP16.45■□□□□ 0.22
THUMPD3-210ENST00000515662 NOTUMQ6P988 496 aa16.45■□□□□ 0.22
THUMPD3-210ENST00000515662 MMS22LQ6ZRQ5 1243 aa16.45■□□□□ 0.22
THUMPD3-210ENST00000515662 GSPT2Q8IYD1 628 aaKnown RBP16.45■□□□□ 0.22
THUMPD3-210ENST00000515662 TFAP2BQ92481 460 aa16.45■□□□□ 0.22
THUMPD3-210ENST00000515662 EIF2AQ9BY44 585 aaKnown RBP16.45■□□□□ 0.22
THUMPD3-210ENST00000515662 TRIM7Q9C029 511 aa16.45■□□□□ 0.22
THUMPD3-210ENST00000515662 SDCBP2Q9H190 292 aa16.45■□□□□ 0.22
THUMPD3-210ENST00000515662 ITGA11Q9UKX5 1188 aa16.45■□□□□ 0.22
THUMPD3-210ENST00000515662 GABRQQ9UN88 632 aa16.45■□□□□ 0.22
THUMPD3-210ENST00000515662 SPOPO43791 374 aa16.44■□□□□ 0.22
THUMPD3-210ENST00000515662 GLI1P08151 1106 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms