RNA–Protein interactions for RNA: ENST00000514027.5

SDHA-216, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,209 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-216ENST00000514027 NFASCO94856 1347 aa13.36□□□□□ -0.27
SDHA-216ENST00000514027 PTPRJQ12913 1337 aa13.36□□□□□ -0.27
SDHA-216ENST00000514027 MROH7Q68CQ1 1323 aa13.36□□□□□ -0.27
SDHA-216ENST00000514027 H0YCG3 227 aa13.35□□□□□ -0.27
SDHA-216ENST00000514027 ZC3H11AO75152 810 aaKnown RBP eCLIP13.35□□□□□ -0.275e-7■□□□□ 11.2
SDHA-216ENST00000514027 UNGP13051 313 aaPredicted RBP13.35□□□□□ -0.27
SDHA-216ENST00000514027 ROR2Q01974 943 aaKnown RBP13.35□□□□□ -0.27
SDHA-216ENST00000514027 SP2Q02086 613 aa13.35□□□□□ -0.27
SDHA-216ENST00000514027 TRIP13Q15645 432 aaPredicted RBP13.35□□□□□ -0.27
SDHA-216ENST00000514027 QPCTQ16769 361 aa13.35□□□□□ -0.27
SDHA-216ENST00000514027 XKR3Q5GH77 459 aa13.35□□□□□ -0.27
SDHA-216ENST00000514027 ANGEL2Q5VTE6 544 aaKnown RBP13.35□□□□□ -0.27
SDHA-216ENST00000514027 NCAPG2Q86XI2 1143 aa13.35□□□□□ -0.27
SDHA-216ENST00000514027 CCDC125Q86Z20 511 aa13.35□□□□□ -0.27
SDHA-216ENST00000514027 TLCD1Q96CP7 247 aa13.35□□□□□ -0.27
SDHA-216ENST00000514027 ZNF570Q96NI8 536 aa13.35□□□□□ -0.27
SDHA-216ENST00000514027 RUNDC3BQ96NL0 473 aa13.35□□□□□ -0.27
SDHA-216ENST00000514027 RBAKQ9NYW8 714 aaPredicted RBP13.35□□□□□ -0.27
SDHA-216ENST00000514027 PCDHB2Q9Y5E7 798 aa13.35□□□□□ -0.27
SDHA-216ENST00000514027 DNAJC8O75937 253 aaPredicted RBP13.35□□□□□ -0.27
SDHA-216ENST00000514027 LINGO3P0C6S8 592 aa13.35□□□□□ -0.27
SDHA-216ENST00000514027 IMPDH2P12268 514 aa13.35□□□□□ -0.27
SDHA-216ENST00000514027 PAPOLAP51003 745 aaKnown RBP13.35□□□□□ -0.27
SDHA-216ENST00000514027 OAZ1P54368 228 aa13.35□□□□□ -0.27
SDHA-216ENST00000514027 RTP1P59025 263 aa13.35□□□□□ -0.27
SDHA-216ENST00000514027 ELF3P78545 371 aaPredicted RBP13.35□□□□□ -0.27
SDHA-216ENST00000514027 PSMD6Q15008 389 aa13.35□□□□□ -0.27
SDHA-216ENST00000514027 SEZ6Q53EL9 994 aa13.35□□□□□ -0.27
SDHA-216ENST00000514027 ZBTB41Q5SVQ8 909 aa13.35□□□□□ -0.27
SDHA-216ENST00000514027 TMEM270Q6UE05 265 aa13.35□□□□□ -0.27
SDHA-216ENST00000514027 SEPT14Q6ZU15 432 aa13.35□□□□□ -0.27
SDHA-216ENST00000514027 ASAP3Q8TDY4 903 aa13.35□□□□□ -0.27
SDHA-216ENST00000514027 C11orf70Q9BRQ4 267 aa13.35□□□□□ -0.27
SDHA-216ENST00000514027 SUDS3Q9H7L9 328 aaPredicted RBP13.35□□□□□ -0.27
SDHA-216ENST00000514027 ZNF302Q9NR11 478 aa13.35□□□□□ -0.27
SDHA-216ENST00000514027 CHST7Q9NS84 486 aa13.35□□□□□ -0.27
SDHA-216ENST00000514027 PCDHB4Q9Y5E5 795 aa13.35□□□□□ -0.27
SDHA-216ENST00000514027 RLFQ13129 1914 aa13.34□□□□□ -0.27
SDHA-216ENST00000514027 MYPNQ86TC9 1320 aa13.34□□□□□ -0.27
SDHA-216ENST00000514027 K7ERI5 159 aa13.34□□□□□ -0.27
SDHA-216ENST00000514027 PEX10O60683 326 aa13.34□□□□□ -0.27
SDHA-216ENST00000514027 CFHP08603 1231 aa13.34□□□□□ -0.27
SDHA-216ENST00000514027 SETSIPP0DME0 302 aa13.34□□□□□ -0.27
SDHA-216ENST00000514027 VPS41P49754 854 aa13.34□□□□□ -0.27
SDHA-216ENST00000514027 MCCD1P59942 119 aaPredicted RBP13.34□□□□□ -0.27
SDHA-216ENST00000514027 BYSLQ13895 437 aaKnown RBP13.34□□□□□ -0.27
SDHA-216ENST00000514027 ZACNQ401N2 412 aa13.34□□□□□ -0.27
SDHA-216ENST00000514027 LACTB2Q53H82 288 aaPredicted RBP13.34□□□□□ -0.27
SDHA-216ENST00000514027 ART4Q93070 314 aa13.34□□□□□ -0.27
SDHA-216ENST00000514027 FAM118BQ9BPY3 351 aa13.34□□□□□ -0.27
SDHA-216ENST00000514027 MSTO1Q9BUK6 570 aa13.34□□□□□ -0.27
SDHA-216ENST00000514027 TRAIPQ9BWF2 469 aa13.34□□□□□ -0.27
SDHA-216ENST00000514027 HEMGNQ9BXL5 484 aa13.34□□□□□ -0.27
SDHA-216ENST00000514027 CNOT10Q9H9A5 744 aaKnown RBP13.34□□□□□ -0.27
SDHA-216ENST00000514027 KIAA1586Q9HCI6 787 aa13.34□□□□□ -0.27
SDHA-216ENST00000514027 DNAJC17Q9NVM6 304 aaKnown RBP13.34□□□□□ -0.27
SDHA-216ENST00000514027 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.34□□□□□ -0.27
SDHA-216ENST00000514027 SPATA31C2B4DYI2 1134 aa13.33□□□□□ -0.27
SDHA-216ENST00000514027 RIPK2O43353 540 aa13.33□□□□□ -0.27
SDHA-216ENST00000514027 OATP04181 439 aa13.33□□□□□ -0.27
SDHA-216ENST00000514027 CDC25CP30307 473 aa13.33□□□□□ -0.27
SDHA-216ENST00000514027 GNA15P30679 374 aa13.33□□□□□ -0.27
SDHA-216ENST00000514027 BAG6P46379 1132 aa13.33□□□□□ -0.27
SDHA-216ENST00000514027 GCLCP48506 637 aaPredicted RBP13.33□□□□□ -0.27
SDHA-216ENST00000514027 IFI35P80217 286 aaPredicted RBP13.33□□□□□ -0.27
SDHA-216ENST00000514027 FSTL1Q12841 308 aa13.33□□□□□ -0.27
SDHA-216ENST00000514027 HHATQ5VTY9 493 aa13.33□□□□□ -0.27
SDHA-216ENST00000514027 C15orf39Q6ZRI6 1047 aa13.33□□□□□ -0.27
SDHA-216ENST00000514027 CPLX4Q7Z7G2 160 aa13.33□□□□□ -0.27
SDHA-216ENST00000514027 C12orf50Q8NA57 414 aaPredicted RBP13.33□□□□□ -0.27
SDHA-216ENST00000514027 SLC7A3Q8WY07 619 aa13.33□□□□□ -0.27
SDHA-216ENST00000514027 TRIM11Q96F44 468 aa13.33□□□□□ -0.27
SDHA-216ENST00000514027 EPAS1Q99814 870 aa13.33□□□□□ -0.27
SDHA-216ENST00000514027 TARS2Q9BW92 718 aaKnown RBP13.33□□□□□ -0.27
SDHA-216ENST00000514027 HAPLN2Q9GZV7 340 aa13.33□□□□□ -0.27
SDHA-216ENST00000514027 LRRC19Q9H756 370 aa13.33□□□□□ -0.27
SDHA-216ENST00000514027 BAIAP2L1Q9UHR4 511 aa13.33□□□□□ -0.27
SDHA-216ENST00000514027 USTQ9Y2C2 406 aa13.33□□□□□ -0.27
SDHA-216ENST00000514027 O00370 1275 aa13.33□□□□□ -0.28
SDHA-216ENST00000514027 FSCN2O14926 492 aa13.33□□□□□ -0.28
SDHA-216ENST00000514027 VNN1O95497 513 aa13.33□□□□□ -0.28
SDHA-216ENST00000514027 ACSL3O95573 720 aa13.33□□□□□ -0.28
SDHA-216ENST00000514027 ANP32DO95626 131 aa13.33□□□□□ -0.28
SDHA-216ENST00000514027 MYBL1P10243 752 aa13.33□□□□□ -0.28
SDHA-216ENST00000514027 CHN1P15882 459 aa13.33□□□□□ -0.28
SDHA-216ENST00000514027 ATP4AP20648 1035 aa13.33□□□□□ -0.28
SDHA-216ENST00000514027 GLRA2P23416 452 aa13.33□□□□□ -0.28
SDHA-216ENST00000514027 BPIFB4P59827 614 aa13.33□□□□□ -0.28
SDHA-216ENST00000514027 CNTN2Q02246 1040 aa13.33□□□□□ -0.28
SDHA-216ENST00000514027 SF3A3Q12874 501 aaKnown RBP eCLIP13.33□□□□□ -0.285e-11■■■■■ 28
SDHA-216ENST00000514027 STXBP2Q15833 593 aa13.33□□□□□ -0.28
SDHA-216ENST00000514027 CCDC38Q502W7 563 aa13.33□□□□□ -0.28
SDHA-216ENST00000514027 CATSPERGQ6ZRH7 1159 aa13.33□□□□□ -0.28
SDHA-216ENST00000514027 ANKRD35Q8N283 1001 aa13.33□□□□□ -0.28
SDHA-216ENST00000514027 CCHCR1Q8TD31 782 aa13.33□□□□□ -0.28
SDHA-216ENST00000514027 PGM2Q96G03 612 aa13.33□□□□□ -0.28
SDHA-216ENST00000514027 FAM81BQ96LP2 452 aa13.33□□□□□ -0.28
SDHA-216ENST00000514027 HERPUD2Q9BSE4 406 aa13.33□□□□□ -0.28
SDHA-216ENST00000514027 DDX23Q9BUQ8 820 aaKnown RBP13.33□□□□□ -0.28
SDHA-216ENST00000514027 APOBEC3GQ9HC16 384 aaKnown RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms