RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 MARSP56192 900 aaKnown RBP12.2□□□□□ -0.46
HTT-213ENST00000513806 LILRA4P59901 499 aa12.2□□□□□ -0.46
HTT-213ENST00000513806 RBP5P82980 135 aa12.2□□□□□ -0.46
HTT-213ENST00000513806 MYL7Q01449 175 aa12.2□□□□□ -0.46
HTT-213ENST00000513806 LRMPQ12912 555 aa12.2□□□□□ -0.46
HTT-213ENST00000513806 TRPC3Q13507 836 aa12.2□□□□□ -0.46
HTT-213ENST00000513806 RTP2Q5QGT7 225 aa12.2□□□□□ -0.46
HTT-213ENST00000513806 PRSS55Q6UWB4 352 aaPredicted RBP12.2□□□□□ -0.46
HTT-213ENST00000513806 DSTYKQ6XUX3 929 aa12.2□□□□□ -0.46
HTT-213ENST00000513806 GLYCTKQ8IVS8 523 aa12.2□□□□□ -0.46
HTT-213ENST00000513806 RSPH1Q8WYR4 309 aa12.2□□□□□ -0.46
HTT-213ENST00000513806 DDX27Q96GQ7 796 aaKnown RBP12.2□□□□□ -0.46
HTT-213ENST00000513806 HPDLQ96IR7 371 aa12.2□□□□□ -0.46
HTT-213ENST00000513806 TUBGCP2Q9BSJ2 902 aa12.2□□□□□ -0.46
HTT-213ENST00000513806 CRACR2AQ9BSW2 395 aa12.2□□□□□ -0.46
HTT-213ENST00000513806 XYLT2Q9H1B5 865 aa12.2□□□□□ -0.46
HTT-213ENST00000513806 RBSNQ9H1K0 784 aa12.2□□□□□ -0.46
HTT-213ENST00000513806 APOBEC3GQ9HC16 384 aaKnown RBP12.2□□□□□ -0.46
HTT-213ENST00000513806 TMEM8AQ9HCN3 771 aa12.2□□□□□ -0.46
HTT-213ENST00000513806 NXF1Q9UBU9 619 aaKnown RBP12.2□□□□□ -0.46
HTT-213ENST00000513806 ITGA11Q9UKX5 1188 aa12.2□□□□□ -0.46
HTT-213ENST00000513806 MYH10P35580 1976 aa12.19□□□□□ -0.46
HTT-213ENST00000513806 SMTNL1A8MU46 457 aa12.19□□□□□ -0.46
HTT-213ENST00000513806 TMEM189-UBE2V1I3L0A0 370 aa12.19□□□□□ -0.46
HTT-213ENST00000513806 IKBKBO14920 756 aa12.19□□□□□ -0.46
HTT-213ENST00000513806 RB1P06400 928 aa12.19□□□□□ -0.46
HTT-213ENST00000513806 CDK11BP21127 795 aaKnown RBP12.19□□□□□ -0.46
HTT-213ENST00000513806 TAF6P49848 677 aa12.19□□□□□ -0.46
HTT-213ENST00000513806 KLK7P49862 253 aa12.19□□□□□ -0.46
HTT-213ENST00000513806 COPB1P53618 953 aaKnown RBP12.19□□□□□ -0.46
HTT-213ENST00000513806 MCCD1P59942 119 aaPredicted RBP12.19□□□□□ -0.46
HTT-213ENST00000513806 PLCB3Q01970 1234 aa12.19□□□□□ -0.46
HTT-213ENST00000513806 ADGRE1Q14246 886 aa12.19□□□□□ -0.46
HTT-213ENST00000513806 MAN2A1Q16706 1144 aa12.19□□□□□ -0.46
HTT-213ENST00000513806 KRT39Q6A163 491 aa12.19□□□□□ -0.46
HTT-213ENST00000513806 APTXQ7Z2E3 356 aaKnown RBP12.19□□□□□ -0.46
HTT-213ENST00000513806 ADGRD2Q7Z7M1 963 aa12.19□□□□□ -0.46
HTT-213ENST00000513806 DDX53Q86TM3 631 aaKnown RBP12.19□□□□□ -0.46
HTT-213ENST00000513806 OSTM1Q86WC4 334 aa12.19□□□□□ -0.46
HTT-213ENST00000513806 FAM114A1Q8IWE2 563 aa12.19□□□□□ -0.46
HTT-213ENST00000513806 FAM200AQ8TCP9 573 aa12.19□□□□□ -0.46
HTT-213ENST00000513806 MYLIPQ8WY64 445 aa12.19□□□□□ -0.46
HTT-213ENST00000513806 TATDN2Q93075 761 aa12.19□□□□□ -0.46
HTT-213ENST00000513806 SENP8Q96LD8 212 aa12.19□□□□□ -0.46
HTT-213ENST00000513806 SAMD11Q96NU1 681 aa12.19□□□□□ -0.46
HTT-213ENST00000513806 TSPAN18Q96SJ8 248 aa12.19□□□□□ -0.46
HTT-213ENST00000513806 TCF25Q9BQ70 676 aa12.19□□□□□ -0.46
HTT-213ENST00000513806 C11orf84Q9BUA3 381 aaPredicted RBP12.19□□□□□ -0.46
HTT-213ENST00000513806 HERC2P3Q9BVR0 1158 aa12.19□□□□□ -0.46
HTT-213ENST00000513806 PLVAPQ9BX97 442 aa12.19□□□□□ -0.46
HTT-213ENST00000513806 ZBP1Q9H171 429 aa12.19□□□□□ -0.46
HTT-213ENST00000513806 SDCBP2Q9H190 292 aa12.19□□□□□ -0.46
HTT-213ENST00000513806 SMYD3Q9H7B4 428 aa12.19□□□□□ -0.46
HTT-213ENST00000513806 ENTPD7Q9NQZ7 604 aa12.19□□□□□ -0.46
HTT-213ENST00000513806 RWDD3Q9Y3V2 267 aa12.19□□□□□ -0.46
HTT-213ENST00000513806 SNX9Q9Y5X1 595 aa12.19□□□□□ -0.46
HTT-213ENST00000513806 MTCL1Q9Y4B5 1905 aaKnown RBP12.18□□□□□ -0.46
HTT-213ENST00000513806 HIDE1A8MVS5 230 aa12.18□□□□□ -0.46
HTT-213ENST00000513806 KPNA7A9QM74 516 aa12.18□□□□□ -0.46
HTT-213ENST00000513806 CYB561D2O14569 222 aa12.18□□□□□ -0.46
HTT-213ENST00000513806 ADAM12O43184 909 aa12.18□□□□□ -0.46
HTT-213ENST00000513806 SOD2P04179 222 aa12.18□□□□□ -0.46
HTT-213ENST00000513806 IGFBP4P22692 258 aa12.18□□□□□ -0.46
HTT-213ENST00000513806 PPM1AP35813 382 aa12.18□□□□□ -0.46
HTT-213ENST00000513806 AARSP49588 968 aaKnown RBP eCLIP12.18□□□□□ -0.46
HTT-213ENST00000513806 CDH8P55286 799 aa12.18□□□□□ -0.46
HTT-213ENST00000513806 KRT17Q04695 432 aa12.18□□□□□ -0.46
HTT-213ENST00000513806 CCDC142Q17RM4 750 aa12.18□□□□□ -0.46
HTT-213ENST00000513806 ZNF699Q32M78 642 aa12.18□□□□□ -0.46
HTT-213ENST00000513806 VWA3BQ502W6 1294 aa12.18□□□□□ -0.46
HTT-213ENST00000513806 WSCD1Q658N2 575 aa12.18□□□□□ -0.46
HTT-213ENST00000513806 GJB7Q6PEY0 223 aa12.18□□□□□ -0.46
HTT-213ENST00000513806 RSPO2Q6UXX9 243 aaPredicted RBP12.18□□□□□ -0.46
HTT-213ENST00000513806 TMC7Q7Z402 723 aa12.18□□□□□ -0.46
HTT-213ENST00000513806 RNF168Q8IYW5 571 aaPredicted RBP12.18□□□□□ -0.46
HTT-213ENST00000513806 MICALL1Q8N3F8 863 aa12.18□□□□□ -0.46
HTT-213ENST00000513806 RIN2Q8WYP3 895 aaPredicted RBP12.18□□□□□ -0.46
HTT-213ENST00000513806 SUSD3Q96L08 255 aa12.18□□□□□ -0.46
HTT-213ENST00000513806 ZNF560Q96MR9 790 aa12.18□□□□□ -0.46
HTT-213ENST00000513806 GUCD1Q96NT3 240 aa12.18□□□□□ -0.46
HTT-213ENST00000513806 TMEM209Q96SK2 561 aa12.18□□□□□ -0.46
HTT-213ENST00000513806 MRPL45Q9BRJ2 306 aaKnown RBP12.18□□□□□ -0.46
HTT-213ENST00000513806 TLR9Q9NR96 1032 aa12.18□□□□□ -0.46
HTT-213ENST00000513806 LIMA1Q9UHB6 759 aaKnown RBP12.18□□□□□ -0.46
HTT-213ENST00000513806 L1RE1Q9UN81 338 aa12.18□□□□□ -0.46
HTT-213ENST00000513806 NME7Q9Y5B8 376 aa12.18□□□□□ -0.46
HTT-213ENST00000513806 SF3B1O75533 1304 aaKnown RBP eCLIP12.17□□□□□ -0.467e-12■■■■■ 77.5
HTT-213ENST00000513806 EYSQ5T1H1 3165 aa12.17□□□□□ -0.46
HTT-213ENST00000513806 DOCK6Q96HP0 2047 aa12.17□□□□□ -0.46
HTT-213ENST00000513806 PER2O15055 1255 aa12.17□□□□□ -0.46
HTT-213ENST00000513806 TEX33O43247 280 aa12.17□□□□□ -0.46
HTT-213ENST00000513806 CXCL14O95715 111 aa12.17□□□□□ -0.46
HTT-213ENST00000513806 OR4Q2P0C623 313 aa12.17□□□□□ -0.46
HTT-213ENST00000513806 SLC9A1P19634 815 aa12.17□□□□□ -0.46
HTT-213ENST00000513806 EEF1GP26641 437 aaKnown RBP12.17□□□□□ -0.46
HTT-213ENST00000513806 GTF2H1P32780 548 aa12.17□□□□□ -0.46
HTT-213ENST00000513806 GTF2F1P35269 517 aaKnown RBP eCLIP12.17□□□□□ -0.461e-7■■■■■ 40.3
HTT-213ENST00000513806 AP3M2P53677 418 aa12.17□□□□□ -0.46
HTT-213ENST00000513806 NOP14P78316 857 aaKnown RBP12.17□□□□□ -0.46
HTT-213ENST00000513806 RBM10P98175 930 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms