RNA–Protein interactions for RNA: ENST00000513803.5

NFKB1-211, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 4

Gene NFKB1, Length 612 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-211ENST00000513803 SIM1P81133 766 aaPredicted RBP11.93□□□□□ -0.5
NFKB1-211ENST00000513803 CYP4A11Q02928 519 aa11.93□□□□□ -0.5
NFKB1-211ENST00000513803 LMAN2Q12907 356 aa11.93□□□□□ -0.5
NFKB1-211ENST00000513803 PLD1Q13393 1074 aa11.93□□□□□ -0.5
NFKB1-211ENST00000513803 MRPL58Q14197 206 aaKnown RBP11.93□□□□□ -0.5
NFKB1-211ENST00000513803 KRT32Q14532 448 aa11.93□□□□□ -0.5
NFKB1-211ENST00000513803 CTXN3Q4LDR2 81 aa11.93□□□□□ -0.5
NFKB1-211ENST00000513803 USP39Q53GS9 565 aaKnown RBP11.93□□□□□ -0.5
NFKB1-211ENST00000513803 TMEM196Q5HYL7 178 aa11.93□□□□□ -0.5
NFKB1-211ENST00000513803 DIEXFQ68CQ4 756 aaKnown RBP11.93□□□□□ -0.5
NFKB1-211ENST00000513803 C3orf58Q8NDZ4 430 aa11.93□□□□□ -0.5
NFKB1-211ENST00000513803 LRRC3BQ96PB8 259 aa11.93□□□□□ -0.5
NFKB1-211ENST00000513803 MKNK1Q9BUB5 465 aa11.93□□□□□ -0.5
NFKB1-211ENST00000513803 ANO2Q9NQ90 1003 aa11.93□□□□□ -0.5
NFKB1-211ENST00000513803 ABCA7Q8IZY2 2146 aa11.93□□□□□ -0.5
NFKB1-211ENST00000513803 LAMA5O15230 3695 aa11.93□□□□□ -0.5
NFKB1-211ENST00000513803 ATG2BQ96BY7 2078 aa11.92□□□□□ -0.5
NFKB1-211ENST00000513803 TRDMT1O14717 391 aaKnown RBP11.92□□□□□ -0.5
NFKB1-211ENST00000513803 MEFVO15553 781 aaPredicted RBP11.92□□□□□ -0.5
NFKB1-211ENST00000513803 SLITRK3O94933 977 aa11.92□□□□□ -0.5
NFKB1-211ENST00000513803 LYPLA2O95372 231 aa11.92□□□□□ -0.5
NFKB1-211ENST00000513803 FGF19O95750 216 aa11.92□□□□□ -0.5
NFKB1-211ENST00000513803 EPHB3P54753 998 aa11.92□□□□□ -0.5
NFKB1-211ENST00000513803 IRX4P78413 519 aa11.92□□□□□ -0.5
NFKB1-211ENST00000513803 TNK2Q07912 1038 aa11.92□□□□□ -0.5
NFKB1-211ENST00000513803 MAPK6Q16659 721 aa11.92□□□□□ -0.5
NFKB1-211ENST00000513803 INF2Q27J81 1249 aa11.92□□□□□ -0.5
NFKB1-211ENST00000513803 TSGA10IPQ3SY00 556 aa11.92□□□□□ -0.5
NFKB1-211ENST00000513803 ARHGAP15Q53QZ3 475 aa11.92□□□□□ -0.5
NFKB1-211ENST00000513803 GLRA4Q5JXX5 417 aa11.92□□□□□ -0.5
NFKB1-211ENST00000513803 NCAPH2Q6IBW4 605 aa11.92□□□□□ -0.5
NFKB1-211ENST00000513803 GALNT17Q6IS24 598 aa11.92□□□□□ -0.5
NFKB1-211ENST00000513803 FSTL4Q6MZW2 842 aa11.92□□□□□ -0.5
NFKB1-211ENST00000513803 ZNF280DQ6N043 979 aa11.92□□□□□ -0.5
NFKB1-211ENST00000513803 APBB1IPQ7Z5R6 666 aaPredicted RBP11.92□□□□□ -0.5
NFKB1-211ENST00000513803 BLIDQ8IZY5 108 aa11.92□□□□□ -0.5
NFKB1-211ENST00000513803 APPL2Q8NEU8 664 aa11.92□□□□□ -0.5
NFKB1-211ENST00000513803 BPIFB1Q8TDL5 484 aa11.92□□□□□ -0.5
NFKB1-211ENST00000513803 EXOC4Q96A65 974 aa11.92□□□□□ -0.5
NFKB1-211ENST00000513803 HHIPQ96QV1 700 aa11.92□□□□□ -0.5
NFKB1-211ENST00000513803 ESYT1Q9BSJ8 1104 aa11.92□□□□□ -0.5
NFKB1-211ENST00000513803 POLR3FQ9H1D9 316 aaPredicted RBP11.92□□□□□ -0.5
NFKB1-211ENST00000513803 C2orf40Q9H1Z8 148 aa11.92□□□□□ -0.5
NFKB1-211ENST00000513803 SLC38A7Q9NVC3 462 aa11.92□□□□□ -0.5
NFKB1-211ENST00000513803 NUB1Q9Y5A7 615 aa11.92□□□□□ -0.5
NFKB1-211ENST00000513803 PDCD11Q14690 1871 aaKnown RBP11.91□□□□□ -0.5
NFKB1-211ENST00000513803 APC2O95996 2303 aa11.91□□□□□ -0.5
NFKB1-211ENST00000513803 SMIM28A0A1B0GU29 152 aa11.91□□□□□ -0.5
NFKB1-211ENST00000513803 ACKR2O00590 384 aa11.91□□□□□ -0.5
NFKB1-211ENST00000513803 RNF40O75150 1001 aa11.91□□□□□ -0.5
NFKB1-211ENST00000513803 BAG4O95429 457 aaKnown RBP11.91□□□□□ -0.5
NFKB1-211ENST00000513803 CAPNS1P04632 268 aa11.91□□□□□ -0.5
NFKB1-211ENST00000513803 CPB1P15086 417 aa11.91□□□□□ -0.5
NFKB1-211ENST00000513803 GCFC2P16383 781 aaKnown RBP11.91□□□□□ -0.5
NFKB1-211ENST00000513803 IFNAR1P17181 557 aa11.91□□□□□ -0.5
NFKB1-211ENST00000513803 DRD1P21728 446 aa11.91□□□□□ -0.5
NFKB1-211ENST00000513803 WEE1P30291 646 aa11.91□□□□□ -0.5
NFKB1-211ENST00000513803 ALDH1A3P47895 512 aa11.91□□□□□ -0.5
NFKB1-211ENST00000513803 CACNB1Q02641 598 aaPredicted RBP11.91□□□□□ -0.5
NFKB1-211ENST00000513803 NTRK3Q16288 839 aa11.91□□□□□ -0.5
NFKB1-211ENST00000513803 COL28A1Q2UY09 1125 aa11.91□□□□□ -0.5
NFKB1-211ENST00000513803 DCAF4L1Q3SXM0 396 aa11.91□□□□□ -0.5
NFKB1-211ENST00000513803 FBXO43Q4G163 708 aa11.91□□□□□ -0.5
NFKB1-211ENST00000513803 SYT13Q7L8C5 426 aa11.91□□□□□ -0.5
NFKB1-211ENST00000513803 KRT25Q7Z3Z0 450 aa11.91□□□□□ -0.5
NFKB1-211ENST00000513803 CYP2U1Q7Z449 544 aa11.91□□□□□ -0.5
NFKB1-211ENST00000513803 TRIM22Q8IYM9 498 aa11.91□□□□□ -0.5
NFKB1-211ENST00000513803 GLIS3Q8NEA6 775 aa11.91□□□□□ -0.5
NFKB1-211ENST00000513803 HAS1Q92839 578 aa11.91□□□□□ -0.5
NFKB1-211ENST00000513803 NUSAP1Q9BXS6 441 aaKnown RBP11.91□□□□□ -0.5
NFKB1-211ENST00000513803 LRRC3Q9BY71 257 aa11.91□□□□□ -0.5
NFKB1-211ENST00000513803 ATXN3LQ9H3M9 355 aa11.91□□□□□ -0.5
NFKB1-211ENST00000513803 GOLGA2P5Q9HBQ8 144 aa11.91□□□□□ -0.5
NFKB1-211ENST00000513803 EVLQ9UI08 416 aaPredicted RBP11.91□□□□□ -0.5
NFKB1-211ENST00000513803 SPAARA0A1B0GVQ0 90 aa11.9□□□□□ -0.5
NFKB1-211ENST00000513803 TTLL13PA6NNM8 815 aa11.9□□□□□ -0.5
NFKB1-211ENST00000513803 UPK3BL1B0FP48 263 aa11.9□□□□□ -0.5
NFKB1-211ENST00000513803 PATE3B3GLJ2 98 aa11.9□□□□□ -0.5
NFKB1-211ENST00000513803 UPK3BL2E5RIL1 263 aa11.9□□□□□ -0.5
NFKB1-211ENST00000513803 M0R2N6 131 aa11.9□□□□□ -0.5
NFKB1-211ENST00000513803 PODXLO00592 558 aa11.9□□□□□ -0.5
NFKB1-211ENST00000513803 XRCC6P12956 609 aaKnown RBP eCLIP11.9□□□□□ -0.5
NFKB1-211ENST00000513803 MARCKSP29966 332 aaPredicted RBP11.9□□□□□ -0.5
NFKB1-211ENST00000513803 RPL9P32969 192 aaKnown RBP11.9□□□□□ -0.5
NFKB1-211ENST00000513803 DGKEP52429 567 aa11.9□□□□□ -0.5
NFKB1-211ENST00000513803 YARSP54577 528 aaKnown RBP11.9□□□□□ -0.5
NFKB1-211ENST00000513803 RUNX3Q13761 415 aa11.9□□□□□ -0.5
NFKB1-211ENST00000513803 ZNF423Q2M1K9 1284 aa11.9□□□□□ -0.5
NFKB1-211ENST00000513803 ADCK5Q3MIX3 580 aa11.9□□□□□ -0.5
NFKB1-211ENST00000513803 STXBP5Q5T5C0 1151 aa11.9□□□□□ -0.5
NFKB1-211ENST00000513803 GPR158Q5T848 1215 aa11.9□□□□□ -0.5
NFKB1-211ENST00000513803 PMS2CLQ68D20 193 aa11.9□□□□□ -0.5
NFKB1-211ENST00000513803 CDCA2Q69YH5 1023 aaPredicted RBP11.9□□□□□ -0.5
NFKB1-211ENST00000513803 RNF19BQ6ZMZ0 732 aa11.9□□□□□ -0.5
NFKB1-211ENST00000513803 NEK8Q86SG6 692 aa11.9□□□□□ -0.5
NFKB1-211ENST00000513803 SLFN12Q8IYM2 578 aa11.9□□□□□ -0.5
NFKB1-211ENST00000513803 FAM177A1Q8N128 213 aaPredicted RBP11.9□□□□□ -0.5
NFKB1-211ENST00000513803 CHCHD4Q8N4Q1 142 aa11.9□□□□□ -0.5
NFKB1-211ENST00000513803 PIGKQ92643 395 aa11.9□□□□□ -0.5
NFKB1-211ENST00000513803 BRF1Q92994 677 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms