RNA–Protein interactions for RNA: ENST00000513538.1

TCOF1-212, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-212ENST00000513538 ZNF197O14709 1029 aa10.54□□□□□ -0.72
TCOF1-212ENST00000513538 SLC16A4O15374 487 aa10.54□□□□□ -0.72
TCOF1-212ENST00000513538 HRO43593 1189 aa10.54□□□□□ -0.72
TCOF1-212ENST00000513538 NEFLP07196 543 aa10.54□□□□□ -0.72
TCOF1-212ENST00000513538 MCF2P10911 925 aa10.54□□□□□ -0.72
TCOF1-212ENST00000513538 CCNE1P24864 410 aa10.54□□□□□ -0.72
TCOF1-212ENST00000513538 RPL9P32969 192 aaKnown RBP10.54□□□□□ -0.72
TCOF1-212ENST00000513538 FNTBP49356 437 aa10.54□□□□□ -0.72
TCOF1-212ENST00000513538 TOB1P50616 345 aaPredicted RBP10.54□□□□□ -0.72
TCOF1-212ENST00000513538 CCR3P51677 355 aa10.54□□□□□ -0.72
TCOF1-212ENST00000513538 NEK4P51957 841 aa10.54□□□□□ -0.72
TCOF1-212ENST00000513538 SPAG1Q07617 926 aa10.54□□□□□ -0.72
TCOF1-212ENST00000513538 ORC2Q13416 577 aaPredicted RBP10.54□□□□□ -0.72
TCOF1-212ENST00000513538 LAIR1Q6GTX8 287 aa10.54□□□□□ -0.72
TCOF1-212ENST00000513538 TXNDC11Q6PKC3 985 aa10.54□□□□□ -0.72
TCOF1-212ENST00000513538 MPZL3Q6UWV2 235 aa10.54□□□□□ -0.72
TCOF1-212ENST00000513538 PRR23BQ6ZRT6 265 aa10.54□□□□□ -0.72
TCOF1-212ENST00000513538 APBB1IPQ7Z5R6 666 aaPredicted RBP10.54□□□□□ -0.72
TCOF1-212ENST00000513538 GPIHBP1Q8IV16 184 aa10.54□□□□□ -0.72
TCOF1-212ENST00000513538 MFSD6LQ8IWD5 586 aa10.54□□□□□ -0.72
TCOF1-212ENST00000513538 IGSF22Q8N9C0 903 aa10.54□□□□□ -0.72
TCOF1-212ENST00000513538 DEPDC1BQ8WUY9 529 aa10.54□□□□□ -0.72
TCOF1-212ENST00000513538 C8orf76Q96K31 380 aa10.54□□□□□ -0.72
TCOF1-212ENST00000513538 TBC1D32Q96NH3 1257 aa10.54□□□□□ -0.72
TCOF1-212ENST00000513538 RTKNQ9BST9 563 aa10.54□□□□□ -0.72
TCOF1-212ENST00000513538 IER2Q9BTL4 223 aa10.54□□□□□ -0.72
TCOF1-212ENST00000513538 MMTAG2Q9BU76 263 aaKnown RBP10.54□□□□□ -0.72
TCOF1-212ENST00000513538 MKNK1Q9BUB5 465 aa10.54□□□□□ -0.72
TCOF1-212ENST00000513538 FOXP1Q9H334 677 aaPredicted RBP10.54□□□□□ -0.72
TCOF1-212ENST00000513538 TRPV4Q9HBA0 871 aa10.54□□□□□ -0.72
TCOF1-212ENST00000513538 KMT5AQ9NQR1 393 aa10.54□□□□□ -0.72
TCOF1-212ENST00000513538 PCDHB8Q9UN66 801 aa10.54□□□□□ -0.72
TCOF1-212ENST00000513538 TIMM13Q9Y5L4 95 aaPredicted RBP10.54□□□□□ -0.72
TCOF1-212ENST00000513538 DENND4CQ5VZ89 1909 aa10.54□□□□□ -0.72
TCOF1-212ENST00000513538 ATG2BQ96BY7 2078 aa10.53□□□□□ -0.72
TCOF1-212ENST00000513538 A0A1W2PRU2 124 aa10.53□□□□□ -0.72
TCOF1-212ENST00000513538 SLC38A8A6NNN8 435 aa10.53□□□□□ -0.72
TCOF1-212ENST00000513538 K7ESF4 209 aa10.53□□□□□ -0.72
TCOF1-212ENST00000513538 M0QZQ0 153 aa10.53□□□□□ -0.72
TCOF1-212ENST00000513538 ZNF263O14978 683 aa10.53□□□□□ -0.72
TCOF1-212ENST00000513538 ADRB1P08588 477 aa10.53□□□□□ -0.72
TCOF1-212ENST00000513538 CXCL8P10145 99 aa10.53□□□□□ -0.72
TCOF1-212ENST00000513538 CPB1P15086 417 aa10.53□□□□□ -0.72
TCOF1-212ENST00000513538 SDHBP21912 280 aa10.53□□□□□ -0.72
TCOF1-212ENST00000513538 CDC25AP30304 524 aa10.53□□□□□ -0.72
TCOF1-212ENST00000513538 AARSP49588 968 aaKnown RBP eCLIP10.53□□□□□ -0.72
TCOF1-212ENST00000513538 GUCY2FP51841 1108 aa10.53□□□□□ -0.72
TCOF1-212ENST00000513538 PTGDRQ13258 359 aa10.53□□□□□ -0.72
TCOF1-212ENST00000513538 DMP1Q13316 513 aaPredicted RBP10.53□□□□□ -0.72
TCOF1-212ENST00000513538 SAFBQ15424 915 aaKnown RBP eCLIP10.53□□□□□ -0.72
TCOF1-212ENST00000513538 CYP4A22Q5TCH4 519 aa10.53□□□□□ -0.72
TCOF1-212ENST00000513538 IQCEQ6IPM2 695 aa10.53□□□□□ -0.72
TCOF1-212ENST00000513538 RINT1Q6NUQ1 792 aa10.53□□□□□ -0.72
TCOF1-212ENST00000513538 C1orf186Q6ZWK4 172 aa10.53□□□□□ -0.72
TCOF1-212ENST00000513538 CCDC83Q8IWF9 413 aa10.53□□□□□ -0.72
TCOF1-212ENST00000513538 TTC9BQ8N6N2 239 aa10.53□□□□□ -0.72
TCOF1-212ENST00000513538 CELF5Q8N6W0 485 aaKnown RBP10.53□□□□□ -0.72
TCOF1-212ENST00000513538 FBXO18Q8NFZ0 1043 aa10.53□□□□□ -0.72
TCOF1-212ENST00000513538 SNX29Q8TEQ0 813 aa10.53□□□□□ -0.72
TCOF1-212ENST00000513538 ZFYVE19Q96K21 471 aa10.53□□□□□ -0.72
TCOF1-212ENST00000513538 ZNF512Q96ME7 567 aaPredicted RBP10.53□□□□□ -0.72
TCOF1-212ENST00000513538 PGLYRP2Q96PD5 576 aa10.53□□□□□ -0.72
TCOF1-212ENST00000513538 ASAH2Q9NR71 780 aa10.53□□□□□ -0.72
TCOF1-212ENST00000513538 ANKFY1Q9P2R3 1169 aa10.53□□□□□ -0.72
TCOF1-212ENST00000513538 LRWD1Q9UFC0 647 aa10.53□□□□□ -0.72
TCOF1-212ENST00000513538 SCN1AP35498 2009 aa10.53□□□□□ -0.72
TCOF1-212ENST00000513538 OBSL1O75147 1896 aa10.53□□□□□ -0.72
TCOF1-212ENST00000513538 CNOT1A5YKK6 2376 aaKnown RBP10.52□□□□□ -0.73
TCOF1-212ENST00000513538 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.52□□□□□ -0.73
TCOF1-212ENST00000513538 SLC30A4O14863 429 aa10.52□□□□□ -0.73
TCOF1-212ENST00000513538 GDF9O60383 454 aa10.52□□□□□ -0.73
TCOF1-212ENST00000513538 OAZ2O95190 189 aa10.52□□□□□ -0.73
TCOF1-212ENST00000513538 RETP07949 1114 aa10.52□□□□□ -0.73
TCOF1-212ENST00000513538 MAPTP10636 758 aaKnown RBP10.52□□□□□ -0.73
TCOF1-212ENST00000513538 RAD51AP2Q09MP3 1159 aa10.52□□□□□ -0.73
TCOF1-212ENST00000513538 FCHO2Q0JRZ9 810 aa10.52□□□□□ -0.73
TCOF1-212ENST00000513538 SIM2Q14190 667 aaPredicted RBP10.52□□□□□ -0.73
TCOF1-212ENST00000513538 NOLC1Q14978 699 aaKnown RBP eCLIP10.52□□□□□ -0.73
TCOF1-212ENST00000513538 ZBTB6Q15916 424 aa10.52□□□□□ -0.73
TCOF1-212ENST00000513538 PRR23CQ6ZRP0 262 aa10.52□□□□□ -0.73
TCOF1-212ENST00000513538 GAREM2Q75VX8 874 aa10.52□□□□□ -0.73
TCOF1-212ENST00000513538 ELMOD1Q8N336 334 aa10.52□□□□□ -0.73
TCOF1-212ENST00000513538 SPEM1Q8N4L4 309 aa10.52□□□□□ -0.73
TCOF1-212ENST00000513538 LEMD2Q8NC56 503 aa10.52□□□□□ -0.73
TCOF1-212ENST00000513538 TMEM161BQ8NDZ6 487 aa10.52□□□□□ -0.73
TCOF1-212ENST00000513538 APPL2Q8NEU8 664 aa10.52□□□□□ -0.73
TCOF1-212ENST00000513538 TTC8Q8TAM2 541 aa10.52□□□□□ -0.73
TCOF1-212ENST00000513538 NETO1Q8TDF5 533 aa10.52□□□□□ -0.73
TCOF1-212ENST00000513538 TMEM209Q96SK2 561 aa10.52□□□□□ -0.73
TCOF1-212ENST00000513538 TCHPQ9BT92 498 aa10.52□□□□□ -0.73
TCOF1-212ENST00000513538 SEMA4GQ9NTN9 838 aa10.52□□□□□ -0.73
TCOF1-212ENST00000513538 GTSE1Q9NYZ3 720 aa10.52□□□□□ -0.73
TCOF1-212ENST00000513538 PCDHB6Q9Y5E3 794 aa10.52□□□□□ -0.73
TCOF1-212ENST00000513538 TTC26A0AVF1 554 aa10.51□□□□□ -0.73
TCOF1-212ENST00000513538 MYBPHLA2RUH7 354 aa10.51□□□□□ -0.73
TCOF1-212ENST00000513538 PPEF2O14830 753 aa10.51□□□□□ -0.73
TCOF1-212ENST00000513538 CHADO15335 359 aa10.51□□□□□ -0.73
TCOF1-212ENST00000513538 FAM189A1O60320 539 aa10.51□□□□□ -0.73
TCOF1-212ENST00000513538 TOM1L1O75674 476 aa10.51□□□□□ -0.73
TCOF1-212ENST00000513538 SOAT2O75908 522 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms