RNA–Protein interactions for RNA: ENST00000513287.5

CLDND1-226, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDND1, Length 999 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-226ENST00000513287 E2F7Q96AV8 911 aa27.45■■□□□ 1.98
CLDND1-226ENST00000513287 CEP72Q9P209 647 aa27.45■■□□□ 1.98
CLDND1-226ENST00000513287 HSFX1Q9UBD0 423 aa27.45■■□□□ 1.98
CLDND1-226ENST00000513287 WDR87Q6ZQQ6 2873 aa27.44■■□□□ 1.98
CLDND1-226ENST00000513287 OR6C75A6NL08 312 aa27.44■■□□□ 1.98
CLDND1-226ENST00000513287 SHISA7A6NL88 538 aa27.44■■□□□ 1.98
CLDND1-226ENST00000513287 MAN2B1O00754 1011 aa27.44■■□□□ 1.98
CLDND1-226ENST00000513287 SPTLC1O15269 473 aa27.44■■□□□ 1.98
CLDND1-226ENST00000513287 OGTO15294 1046 aa27.44■■□□□ 1.98
CLDND1-226ENST00000513287 TYMPP19971 482 aa27.44■■□□□ 1.98
CLDND1-226ENST00000513287 UBA7P41226 1012 aa27.44■■□□□ 1.98
CLDND1-226ENST00000513287 POU5F1Q01860 360 aaKnown RBP27.44■■□□□ 1.98
CLDND1-226ENST00000513287 PLD1Q13393 1074 aa27.44■■□□□ 1.98
CLDND1-226ENST00000513287 FZD5Q13467 585 aa27.44■■□□□ 1.98
CLDND1-226ENST00000513287 RNF19BQ6ZMZ0 732 aa27.44■■□□□ 1.98
CLDND1-226ENST00000513287 TPRG1Q6ZUI0 275 aa27.44■■□□□ 1.98
CLDND1-226ENST00000513287 MAP4K3Q8IVH8 894 aa27.44■■□□□ 1.98
CLDND1-226ENST00000513287 DEPDC1BQ8WUY9 529 aa27.44■■□□□ 1.98
CLDND1-226ENST00000513287 RUBCNQ92622 972 aa27.44■■□□□ 1.98
CLDND1-226ENST00000513287 TCEAL4Q96EI5 215 aa27.44■■□□□ 1.98
CLDND1-226ENST00000513287 KIF12Q96FN5 646 aa27.44■■□□□ 1.98
CLDND1-226ENST00000513287 BICD1Q96G01 975 aa27.44■■□□□ 1.98
CLDND1-226ENST00000513287 PLIN2Q99541 437 aa27.44■■□□□ 1.98
CLDND1-226ENST00000513287 REEP2Q9BRK0 252 aa27.44■■□□□ 1.98
CLDND1-226ENST00000513287 IER2Q9BTL4 223 aa27.44■■□□□ 1.98
CLDND1-226ENST00000513287 TRMT61BQ9BVS5 477 aaKnown RBP27.44■■□□□ 1.98
CLDND1-226ENST00000513287 PARVGQ9HBI0 331 aa27.44■■□□□ 1.98
CLDND1-226ENST00000513287 SPATA6Q9NWH7 488 aaPredicted RBP27.44■■□□□ 1.98
CLDND1-226ENST00000513287 PCDHGA2Q9Y5H1 932 aa27.44■■□□□ 1.98
CLDND1-226ENST00000513287 A0A0B4J269 797 aa27.43■■□□□ 1.98
CLDND1-226ENST00000513287 MOSPD3O75425 235 aa27.43■■□□□ 1.98
CLDND1-226ENST00000513287 CPB1P15086 417 aa27.43■■□□□ 1.98
CLDND1-226ENST00000513287 PSMC3P17980 439 aa27.43■■□□□ 1.98
CLDND1-226ENST00000513287 LONP1P36776 959 aaKnown RBP27.43■■□□□ 1.98
CLDND1-226ENST00000513287 MATR3P43243 847 aaKnown RBP eCLIP27.43■■□□□ 1.98
CLDND1-226ENST00000513287 LIG4P49917 911 aa27.43■■□□□ 1.98
CLDND1-226ENST00000513287 TWF1Q12792 350 aa27.43■■□□□ 1.98
CLDND1-226ENST00000513287 GPR17Q13304 367 aa27.43■■□□□ 1.98
CLDND1-226ENST00000513287 MYBPC2Q14324 1141 aa27.43■■□□□ 1.98
CLDND1-226ENST00000513287 ZNF687Q8N1G0 1237 aa27.43■■□□□ 1.98
CLDND1-226ENST00000513287 SUMF1Q8NBK3 374 aa27.43■■□□□ 1.98
CLDND1-226ENST00000513287 ASAH2Q9NR71 780 aa27.43■■□□□ 1.98
CLDND1-226ENST00000513287 BLOC1S4Q9NUP1 217 aa27.43■■□□□ 1.98
CLDND1-226ENST00000513287 F5P12259 2224 aa27.43■■□□□ 1.98
CLDND1-226ENST00000513287 NPHP3-ACAD11A0A0J9YXS1 232 aa27.42■■□□□ 1.98
CLDND1-226ENST00000513287 LACTBL1A8MY62 500 aa27.42■■□□□ 1.98
CLDND1-226ENST00000513287 HNRNPDLO14979 420 aaKnown RBP27.42■■□□□ 1.98
CLDND1-226ENST00000513287 KINO60870 393 aaKnown RBP27.42■■□□□ 1.98
CLDND1-226ENST00000513287 TARSP26639 723 aaKnown RBP27.42■■□□□ 1.98
CLDND1-226ENST00000513287 ENOX2Q16206 610 aaKnown RBP27.42■■□□□ 1.98
CLDND1-226ENST00000513287 SPATA1Q5VX52 437 aa27.42■■□□□ 1.98
CLDND1-226ENST00000513287 ZBTB44Q8NCP5 570 aa27.42■■□□□ 1.98
CLDND1-226ENST00000513287 FAM126AQ9BYI3 521 aaPredicted RBP27.42■■□□□ 1.98
CLDND1-226ENST00000513287 RPF1Q9H9Y2 349 aaKnown RBP27.42■■□□□ 1.98
CLDND1-226ENST00000513287 HEBP1Q9NRV9 189 aa27.42■■□□□ 1.98
CLDND1-226ENST00000513287 DERAQ9Y315 318 aa27.42■■□□□ 1.98
CLDND1-226ENST00000513287 ZSCAN21Q9Y5A6 473 aaPredicted RBP27.42■■□□□ 1.98
CLDND1-226ENST00000513287 COL4A3Q01955 1670 aa27.41■■□□□ 1.98
CLDND1-226ENST00000513287 TRAK2O60296 914 aa27.41■■□□□ 1.98
CLDND1-226ENST00000513287 CD72P21854 359 aa27.41■■□□□ 1.98
CLDND1-226ENST00000513287 TNFSF9P41273 254 aa27.41■■□□□ 1.98
CLDND1-226ENST00000513287 GTF2BQ00403 316 aa27.41■■□□□ 1.98
CLDND1-226ENST00000513287 BRAPQ7Z569 592 aa27.41■■□□□ 1.98
CLDND1-226ENST00000513287 USP37Q86T82 979 aa27.41■■□□□ 1.98
CLDND1-226ENST00000513287 GPBP1Q86WP2 473 aa27.41■■□□□ 1.98
CLDND1-226ENST00000513287 MYCT1Q8N699 235 aa27.41■■□□□ 1.98
CLDND1-226ENST00000513287 FIZ1Q96SL8 496 aa27.41■■□□□ 1.98
CLDND1-226ENST00000513287 LRRC3Q9BY71 257 aa27.41■■□□□ 1.98
CLDND1-226ENST00000513287 ST6GALNAC4Q9H4F1 302 aa27.41■■□□□ 1.98
CLDND1-226ENST00000513287 BRD9Q9H8M2 597 aa27.41■■□□□ 1.98
CLDND1-226ENST00000513287 ZNF334Q9HCZ1 680 aaPredicted RBP27.41■■□□□ 1.98
CLDND1-226ENST00000513287 CPSF3Q9UKF6 684 aaKnown RBP27.41■■□□□ 1.98
CLDND1-226ENST00000513287 ASB3Q9Y575 518 aa27.41■■□□□ 1.98
CLDND1-226ENST00000513287 VNN2O95498 520 aa27.4■■□□□ 1.98
CLDND1-226ENST00000513287 LILRA4P59901 499 aa27.4■■□□□ 1.98
CLDND1-226ENST00000513287 CACNB1Q02641 598 aaPredicted RBP27.4■■□□□ 1.98
CLDND1-226ENST00000513287 MFSD6LQ8IWD5 586 aa27.4■■□□□ 1.98
CLDND1-226ENST00000513287 PRMT8Q9NR22 394 aaPredicted RBP27.4■■□□□ 1.98
CLDND1-226ENST00000513287 ZSCAN32Q9NX65 697 aa27.4■■□□□ 1.98
CLDND1-226ENST00000513287 SMC3Q9UQE7 1217 aa27.4■■□□□ 1.98
CLDND1-226ENST00000513287 YIPF1Q9Y548 306 aa27.4■■□□□ 1.98
CLDND1-226ENST00000513287 COL4A2P08572 1712 aa27.39■■□□□ 1.98
CLDND1-226ENST00000513287 LILRB5O75023 590 aa27.39■■□□□ 1.98
CLDND1-226ENST00000513287 FAM13AO94988 1023 aa27.39■■□□□ 1.98
CLDND1-226ENST00000513287 LARP1BQ659C4 914 aaKnown RBP27.39■■□□□ 1.98
CLDND1-226ENST00000513287 C1orf228Q6PIY5 440 aa27.39■■□□□ 1.98
CLDND1-226ENST00000513287 VITQ6UXI7 678 aa27.39■■□□□ 1.98
CLDND1-226ENST00000513287 HS6ST3Q8IZP7 471 aa27.39■■□□□ 1.98
CLDND1-226ENST00000513287 RAD54LQ92698 747 aa27.39■■□□□ 1.98
CLDND1-226ENST00000513287 MSANTD3Q96H12 275 aa27.39■■□□□ 1.98
CLDND1-226ENST00000513287 ZSWIM3Q96MP5 696 aa27.39■■□□□ 1.98
CLDND1-226ENST00000513287 CCSER1Q9C0I3 900 aa27.39■■□□□ 1.98
CLDND1-226ENST00000513287 ASB7Q9H672 318 aa27.39■■□□□ 1.98
CLDND1-226ENST00000513287 STYXL1Q9Y6J8 313 aa27.39■■□□□ 1.98
CLDND1-226ENST00000513287 CACNA1AO00555 2505 aa27.38■■□□□ 1.97
CLDND1-226ENST00000513287 K7ENM7 598 aa27.38■■□□□ 1.97
CLDND1-226ENST00000513287 CD2BP2O95400 341 aaKnown RBP27.38■■□□□ 1.97
CLDND1-226ENST00000513287 CYP11A1P05108 521 aa27.38■■□□□ 1.97
CLDND1-226ENST00000513287 SPAG1Q07617 926 aa27.38■■□□□ 1.97
CLDND1-226ENST00000513287 OVOS1Q6IE37 1185 aa27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms