RNA–Protein interactions for RNA: ENST00000513159.5

PTPN20-227, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-227ENST00000513159 MYH10P35580 1976 aa11.14□□□□□ -0.63
PTPN20-227ENST00000513159 ADAM12O43184 909 aa11.14□□□□□ -0.63
PTPN20-227ENST00000513159 TBC1D4O60343 1298 aa11.14□□□□□ -0.63
PTPN20-227ENST00000513159 TADA2AO75478 443 aa11.14□□□□□ -0.63
PTPN20-227ENST00000513159 TNNC2P02585 160 aa11.14□□□□□ -0.63
PTPN20-227ENST00000513159 KRT19P08727 400 aa11.14□□□□□ -0.63
PTPN20-227ENST00000513159 CTSAP10619 480 aa11.14□□□□□ -0.63
PTPN20-227ENST00000513159 ATP1A3P13637 1013 aa11.14□□□□□ -0.63
PTPN20-227ENST00000513159 KRT13P13646 458 aa11.14□□□□□ -0.63
PTPN20-227ENST00000513159 GTF2H1P32780 548 aa11.14□□□□□ -0.63
PTPN20-227ENST00000513159 FMO5P49326 533 aa11.14□□□□□ -0.63
PTPN20-227ENST00000513159 ZNF165P49910 485 aa11.14□□□□□ -0.63
PTPN20-227ENST00000513159 ZNF445P59923 1031 aa11.14□□□□□ -0.63
PTPN20-227ENST00000513159 RBP5P82980 135 aa11.14□□□□□ -0.63
PTPN20-227ENST00000513159 MYL5Q02045 173 aa11.14□□□□□ -0.63
PTPN20-227ENST00000513159 DSG1Q02413 1049 aa11.14□□□□□ -0.63
PTPN20-227ENST00000513159 UBE3AQ05086 875 aa11.14□□□□□ -0.63
PTPN20-227ENST00000513159 KCNH2Q12809 1159 aa11.14□□□□□ -0.63
PTPN20-227ENST00000513159 MRPL58Q14197 206 aaKnown RBP11.14□□□□□ -0.63
PTPN20-227ENST00000513159 PTPN14Q15678 1187 aa11.14□□□□□ -0.63
PTPN20-227ENST00000513159 DCAF17Q5H9S7 520 aaPredicted RBP11.14□□□□□ -0.63
PTPN20-227ENST00000513159 FAM171A1Q5VUB5 890 aa11.14□□□□□ -0.63
PTPN20-227ENST00000513159 SPOPLQ6IQ16 392 aa11.14□□□□□ -0.63
PTPN20-227ENST00000513159 DPY19L2P1Q6NXN4 242 aa11.14□□□□□ -0.63
PTPN20-227ENST00000513159 PRSS55Q6UWB4 352 aaPredicted RBP11.14□□□□□ -0.63
PTPN20-227ENST00000513159 LRSAM1Q6UWE0 723 aa11.14□□□□□ -0.63
PTPN20-227ENST00000513159 RSPO2Q6UXX9 243 aaPredicted RBP11.14□□□□□ -0.63
PTPN20-227ENST00000513159 LRRC52Q8N7C0 313 aa11.14□□□□□ -0.63
PTPN20-227ENST00000513159 LNX1Q8TBB1 728 aaPredicted RBP11.14□□□□□ -0.63
PTPN20-227ENST00000513159 RTP3Q9BQQ7 232 aa11.14□□□□□ -0.63
PTPN20-227ENST00000513159 PI4K2AQ9BTU6 479 aa11.14□□□□□ -0.63
PTPN20-227ENST00000513159 MMRN2Q9H8L6 949 aa11.14□□□□□ -0.63
PTPN20-227ENST00000513159 APOBEC3GQ9HC16 384 aaKnown RBP11.14□□□□□ -0.63
PTPN20-227ENST00000513159 TMEM8AQ9HCN3 771 aa11.14□□□□□ -0.63
PTPN20-227ENST00000513159 TIMM13Q9Y5L4 95 aaPredicted RBP11.14□□□□□ -0.63
PTPN20-227ENST00000513159 EYSQ5T1H1 3165 aa11.14□□□□□ -0.63
PTPN20-227ENST00000513159 NOTCH4Q99466 2003 aa11.13□□□□□ -0.63
PTPN20-227ENST00000513159 C2orf71A6NGG8 1288 aa11.13□□□□□ -0.63
PTPN20-227ENST00000513159 KPNA7A9QM74 516 aa11.13□□□□□ -0.63
PTPN20-227ENST00000513159 KCNJ18B7U540 433 aa11.13□□□□□ -0.63
PTPN20-227ENST00000513159 PMM2O15305 246 aa11.13□□□□□ -0.63
PTPN20-227ENST00000513159 HCRTO43612 131 aa11.13□□□□□ -0.63
PTPN20-227ENST00000513159 STAU1O95793 577 aaKnown RBP11.13□□□□□ -0.63
PTPN20-227ENST00000513159 GNA14O95837 355 aa11.13□□□□□ -0.63
PTPN20-227ENST00000513159 ASS1P00966 412 aaKnown RBP11.13□□□□□ -0.63
PTPN20-227ENST00000513159 RPL17P18621 184 aaKnown RBP11.13□□□□□ -0.63
PTPN20-227ENST00000513159 GTF2F1P35269 517 aaKnown RBP eCLIP11.13□□□□□ -0.63
PTPN20-227ENST00000513159 TAF6P49848 677 aa11.13□□□□□ -0.63
PTPN20-227ENST00000513159 MXI1P50539 228 aa11.13□□□□□ -0.63
PTPN20-227ENST00000513159 AP3M2P53677 418 aa11.13□□□□□ -0.63
PTPN20-227ENST00000513159 KRT17Q04695 432 aa11.13□□□□□ -0.63
PTPN20-227ENST00000513159 NCOA4Q13772 614 aa11.13□□□□□ -0.63
PTPN20-227ENST00000513159 KCNJ12Q14500 433 aa11.13□□□□□ -0.63
PTPN20-227ENST00000513159 SOWAHAQ2M3V2 549 aa11.13□□□□□ -0.63
PTPN20-227ENST00000513159 TCP11X2Q5H9J9 407 aa11.13□□□□□ -0.63
PTPN20-227ENST00000513159 TCERG1LQ5VWI1 586 aa11.13□□□□□ -0.63
PTPN20-227ENST00000513159 PLPP4Q5VZY2 271 aa11.13□□□□□ -0.63
PTPN20-227ENST00000513159 KRT39Q6A163 491 aa11.13□□□□□ -0.63
PTPN20-227ENST00000513159 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.13□□□□□ -0.63
PTPN20-227ENST00000513159 LUZP1Q86V48 1076 aa11.13□□□□□ -0.63
PTPN20-227ENST00000513159 OSTM1Q86WC4 334 aa11.13□□□□□ -0.63
PTPN20-227ENST00000513159 GAS2L3Q86XJ1 694 aa11.13□□□□□ -0.63
PTPN20-227ENST00000513159 MRPL38Q96DV4 380 aaKnown RBP11.13□□□□□ -0.63
PTPN20-227ENST00000513159 HPDLQ96IR7 371 aa11.13□□□□□ -0.63
PTPN20-227ENST00000513159 TCF25Q9BQ70 676 aa11.13□□□□□ -0.63
PTPN20-227ENST00000513159 LMAN2LQ9H0V9 348 aa11.13□□□□□ -0.63
PTPN20-227ENST00000513159 SDCBP2Q9H190 292 aa11.13□□□□□ -0.63
PTPN20-227ENST00000513159 VRTNQ9H8Y1 702 aa11.13□□□□□ -0.63
PTPN20-227ENST00000513159 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.13□□□□□ -0.63
PTPN20-227ENST00000513159 TLR9Q9NR96 1032 aa11.13□□□□□ -0.63
PTPN20-227ENST00000513159 GDAP2Q9NXN4 497 aa11.13□□□□□ -0.63
PTPN20-227ENST00000513159 PCDHB8Q9UN66 801 aa11.13□□□□□ -0.63
PTPN20-227ENST00000513159 L1RE1Q9UN81 338 aa11.13□□□□□ -0.63
PTPN20-227ENST00000513159 POLIQ9UNA4 740 aa11.13□□□□□ -0.63
PTPN20-227ENST00000513159 NUB1Q9Y5A7 615 aa11.13□□□□□ -0.63
PTPN20-227ENST00000513159 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.13□□□□□ -0.63
PTPN20-227ENST00000513159 IRAK3Q9Y616 596 aa11.13□□□□□ -0.63
PTPN20-227ENST00000513159 C2orf16Q68DN1 1984 aa11.13□□□□□ -0.63
PTPN20-227ENST00000513159 PRUNE2Q8WUY3 3088 aa11.12□□□□□ -0.63
PTPN20-227ENST00000513159 SF3B1O75533 1304 aaKnown RBP eCLIP11.12□□□□□ -0.63
PTPN20-227ENST00000513159 GREB1Q4ZG55 1949 aa11.12□□□□□ -0.63
PTPN20-227ENST00000513159 CARNS1A5YM72 827 aa11.12□□□□□ -0.63
PTPN20-227ENST00000513159 LRRC10BA6NIK2 292 aa11.12□□□□□ -0.63
PTPN20-227ENST00000513159 CYB561D2O14569 222 aa11.12□□□□□ -0.63
PTPN20-227ENST00000513159 FGFR1OPO95684 399 aaKnown RBP11.12□□□□□ -0.63
PTPN20-227ENST00000513159 CYP11A1P05108 521 aa11.12□□□□□ -0.63
PTPN20-227ENST00000513159 GLUD2P49448 558 aa11.12□□□□□ -0.63
PTPN20-227ENST00000513159 RBM10P98175 930 aaKnown RBP11.12□□□□□ -0.63
PTPN20-227ENST00000513159 APBA1Q02410 837 aa11.12□□□□□ -0.63
PTPN20-227ENST00000513159 BIRC3Q13489 604 aa11.12□□□□□ -0.63
PTPN20-227ENST00000513159 KCNC3Q14003 757 aa11.12□□□□□ -0.63
PTPN20-227ENST00000513159 KRT31Q15323 416 aa11.12□□□□□ -0.63
PTPN20-227ENST00000513159 TPD52L1Q16890 204 aaPredicted RBP11.12□□□□□ -0.63
PTPN20-227ENST00000513159 USP41Q3LFD5 358 aa11.12□□□□□ -0.63
PTPN20-227ENST00000513159 VARS2Q5ST30 1063 aaKnown RBP11.12□□□□□ -0.63
PTPN20-227ENST00000513159 WSCD1Q658N2 575 aa11.12□□□□□ -0.63
PTPN20-227ENST00000513159 MRPL43Q8N983 215 aaKnown RBP11.12□□□□□ -0.63
PTPN20-227ENST00000513159 VN1R2Q8NFZ6 395 aa11.12□□□□□ -0.63
PTPN20-227ENST00000513159 FEZF2Q8TBJ5 459 aa11.12□□□□□ -0.63
PTPN20-227ENST00000513159 KBTBD7Q8WVZ9 684 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms