RNA–Protein interactions for RNA: ENST00000513048.5

DHFR-206, Transcript of dihydrofolate reductase, humanhuman

TSL 1 (best)

Gene DHFR, Length 994 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-206ENST00000513048 ATICP31939 592 aa10.04□□□□□ -0.8
DHFR-206ENST00000513048 CYP2C18P33260 490 aa10.04□□□□□ -0.8
DHFR-206ENST00000513048 MLH1P40692 756 aa10.04□□□□□ -0.8
DHFR-206ENST00000513048 ZNF132P52740 706 aa10.04□□□□□ -0.8
DHFR-206ENST00000513048 RBP5P82980 135 aa10.04□□□□□ -0.8
DHFR-206ENST00000513048 ARID5AQ03989 594 aa10.04□□□□□ -0.8
DHFR-206ENST00000513048 KLHL30Q0D2K2 578 aa10.04□□□□□ -0.8
DHFR-206ENST00000513048 TRPC3Q13507 836 aa10.04□□□□□ -0.8
DHFR-206ENST00000513048 ZNF699Q32M78 642 aa10.04□□□□□ -0.8
DHFR-206ENST00000513048 C9orf57Q5W0N0 161 aa10.04□□□□□ -0.8
DHFR-206ENST00000513048 CRIPAKQ8N1N5 446 aa10.04□□□□□ -0.8
DHFR-206ENST00000513048 ACRBPQ8NEB7 543 aa10.04□□□□□ -0.8
DHFR-206ENST00000513048 DBF4BQ8NFT6 615 aa10.04□□□□□ -0.8
DHFR-206ENST00000513048 BEST2Q8NFU1 509 aa10.04□□□□□ -0.8
DHFR-206ENST00000513048 SLC30A5Q8TAD4 765 aa10.04□□□□□ -0.8
DHFR-206ENST00000513048 ATRIPQ8WXE1 791 aa10.04□□□□□ -0.8
DHFR-206ENST00000513048 SCLYQ96I15 445 aa10.04□□□□□ -0.8
DHFR-206ENST00000513048 GAD1Q99259 594 aa10.04□□□□□ -0.8
DHFR-206ENST00000513048 FTHL17Q9BXU8 183 aa10.04□□□□□ -0.8
DHFR-206ENST00000513048 NIF3L1Q9GZT8 377 aa10.04□□□□□ -0.8
DHFR-206ENST00000513048 SDCBP2Q9H190 292 aa10.04□□□□□ -0.8
DHFR-206ENST00000513048 NOCTQ9UK39 431 aaKnown RBP10.04□□□□□ -0.8
DHFR-206ENST00000513048 POLIQ9UNA4 740 aa10.04□□□□□ -0.8
DHFR-206ENST00000513048 AGAP1Q9UPQ3 857 aa10.04□□□□□ -0.8
DHFR-206ENST00000513048 ATP11BQ9Y2G3 1177 aa10.04□□□□□ -0.8
DHFR-206ENST00000513048 PPP2R2CQ9Y2T4 447 aa10.04□□□□□ -0.8
DHFR-206ENST00000513048 BZW2Q9Y6E2 419 aaKnown RBP10.04□□□□□ -0.8
DHFR-206ENST00000513048 A0A087X0T9 212 aa10.03□□□□□ -0.8
DHFR-206ENST00000513048 ARL5CA6NH57 179 aa10.03□□□□□ -0.8
DHFR-206ENST00000513048 DDX3XO00571 662 aaKnown RBP eCLIP10.03□□□□□ -0.81e-12■□□□□ 9.6
DHFR-206ENST00000513048 ENPP3O14638 875 aa10.03□□□□□ -0.8
DHFR-206ENST00000513048 KIAA0355O15063 1070 aa10.03□□□□□ -0.8
DHFR-206ENST00000513048 CYP26A1O43174 497 aa10.03□□□□□ -0.8
DHFR-206ENST00000513048 OFD1O75665 1012 aa10.03□□□□□ -0.8
DHFR-206ENST00000513048 PARNO95453 639 aaKnown RBP10.03□□□□□ -0.8
DHFR-206ENST00000513048 EOMESO95936 686 aa10.03□□□□□ -0.8
DHFR-206ENST00000513048 KRT19P08727 400 aa10.03□□□□□ -0.8
DHFR-206ENST00000513048 CLTBP09497 229 aa10.03□□□□□ -0.8
DHFR-206ENST00000513048 FAM228BP0C875 321 aa10.03□□□□□ -0.8
DHFR-206ENST00000513048 CHRNB2P17787 502 aa10.03□□□□□ -0.8
DHFR-206ENST00000513048 ANXA13P27216 316 aa10.03□□□□□ -0.8
DHFR-206ENST00000513048 KIF11P52732 1056 aa10.03□□□□□ -0.8
DHFR-206ENST00000513048 CCL23P55773 120 aa10.03□□□□□ -0.8
DHFR-206ENST00000513048 SLC24A5Q71RS6 500 aa10.03□□□□□ -0.8
DHFR-206ENST00000513048 LIMS2Q7Z4I7 341 aa10.03□□□□□ -0.8
DHFR-206ENST00000513048 NECAB2Q7Z6G3 386 aa10.03□□□□□ -0.8
DHFR-206ENST00000513048 FMNL3Q8IVF7 1028 aa10.03□□□□□ -0.8
DHFR-206ENST00000513048 HACE1Q8IYU2 909 aa10.03□□□□□ -0.8
DHFR-206ENST00000513048 LRRC52Q8N7C0 313 aa10.03□□□□□ -0.8
DHFR-206ENST00000513048 LNX1Q8TBB1 728 aaPredicted RBP10.03□□□□□ -0.8
DHFR-206ENST00000513048 EPS8L1Q8TE68 723 aa10.03□□□□□ -0.8
DHFR-206ENST00000513048 DDX1Q92499 740 aaKnown RBP10.03□□□□□ -0.8
DHFR-206ENST00000513048 SEPT8Q92599 483 aa10.03□□□□□ -0.8
DHFR-206ENST00000513048 PGBD4Q96DM1 585 aa10.03□□□□□ -0.8
DHFR-206ENST00000513048 HPDLQ96IR7 371 aa10.03□□□□□ -0.8
DHFR-206ENST00000513048 PPP1R13BQ96KQ4 1090 aa10.03□□□□□ -0.8
DHFR-206ENST00000513048 CCDC42Q96M95 316 aa10.03□□□□□ -0.8
DHFR-206ENST00000513048 PPP1R12CQ9BZL4 782 aa10.03□□□□□ -0.8
DHFR-206ENST00000513048 RSAD1Q9HA92 442 aa10.03□□□□□ -0.8
DHFR-206ENST00000513048 GOLGA2P5Q9HBQ8 144 aa10.03□□□□□ -0.8
DHFR-206ENST00000513048 ACP6Q9NPH0 428 aa10.03□□□□□ -0.8
DHFR-206ENST00000513048 LTBP2Q14767 1821 aa10.03□□□□□ -0.8
DHFR-206ENST00000513048 TTC3P53804 2025 aa10.02□□□□□ -0.8
DHFR-206ENST00000513048 MICAL3Q7RTP6 2002 aa10.02□□□□□ -0.8
DHFR-206ENST00000513048 TDRD15B5MCY1 1934 aaKnown RBP10.02□□□□□ -0.81
DHFR-206ENST00000513048 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.02□□□□□ -0.81
DHFR-206ENST00000513048 TRIM43BA6NCK2 446 aa10.02□□□□□ -0.81
DHFR-206ENST00000513048 RCCD1A6NED2 376 aa10.02□□□□□ -0.81
DHFR-206ENST00000513048 SPTLC1O15269 473 aa10.02□□□□□ -0.81
DHFR-206ENST00000513048 XPOTO43592 962 aaKnown RBP10.02□□□□□ -0.81
DHFR-206ENST00000513048 CALCAP01258 141 aa10.02□□□□□ -0.81
DHFR-206ENST00000513048 EN2P19622 333 aaPredicted RBP10.02□□□□□ -0.81
DHFR-206ENST00000513048 IGFBP6P24592 240 aaPredicted RBP10.02□□□□□ -0.81
DHFR-206ENST00000513048 ITGB8P26012 769 aa10.02□□□□□ -0.81
DHFR-206ENST00000513048 MSNP26038 577 aaKnown RBP10.02□□□□□ -0.81
DHFR-206ENST00000513048 CYLC1P35663 651 aaPredicted RBP10.02□□□□□ -0.81
DHFR-206ENST00000513048 ARHGAP25P42331 645 aa10.02□□□□□ -0.81
DHFR-206ENST00000513048 SCNN1GP51170 649 aa10.02□□□□□ -0.81
DHFR-206ENST00000513048 CYP27A1Q02318 531 aa10.02□□□□□ -0.81
DHFR-206ENST00000513048 GFPT1Q06210 699 aaPredicted RBP10.02□□□□□ -0.81
DHFR-206ENST00000513048 SLC18A3Q16572 532 aa10.02□□□□□ -0.81
DHFR-206ENST00000513048 TDRD12Q587J7 1177 aaKnown RBP10.02□□□□□ -0.81
DHFR-206ENST00000513048 ZNF667Q5HYK9 610 aa10.02□□□□□ -0.81
DHFR-206ENST00000513048 CLLU1OSQ5K130 101 aa10.02□□□□□ -0.81
DHFR-206ENST00000513048 LCE2DQ5TA82 110 aaPredicted RBP10.02□□□□□ -0.81
DHFR-206ENST00000513048 ZNF662Q6ZS27 426 aa10.02□□□□□ -0.81
DHFR-206ENST00000513048 NOP9Q86U38 636 aaKnown RBP10.02□□□□□ -0.81
DHFR-206ENST00000513048 SLC47A2Q86VL8 602 aa10.02□□□□□ -0.81
DHFR-206ENST00000513048 WHAMMQ8TF30 809 aa10.02□□□□□ -0.81
DHFR-206ENST00000513048 SLC20A1Q8WUM9 679 aa10.02□□□□□ -0.81
DHFR-206ENST00000513048 APBB2Q92870 758 aa10.02□□□□□ -0.81
DHFR-206ENST00000513048 TRIM43Q96BQ3 446 aaPredicted RBP10.02□□□□□ -0.81
DHFR-206ENST00000513048 AGPAT1Q99943 283 aa10.02□□□□□ -0.81
DHFR-206ENST00000513048 IMPG2Q9BZV3 1241 aa10.02□□□□□ -0.81
DHFR-206ENST00000513048 ELAC1Q9H777 363 aaKnown RBP10.02□□□□□ -0.81
DHFR-206ENST00000513048 SMYD3Q9H7B4 428 aa10.02□□□□□ -0.81
DHFR-206ENST00000513048 CYP3A43Q9HB55 503 aa10.02□□□□□ -0.81
DHFR-206ENST00000513048 UBN1Q9NPG3 1134 aa10.02□□□□□ -0.81
DHFR-206ENST00000513048 RRAGDQ9NQL2 400 aaPredicted RBP10.02□□□□□ -0.81
DHFR-206ENST00000513048 CISHQ9NSE2 258 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms