RNA–Protein interactions for RNA: ENST00000513043.5

DDR1-270, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 604 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-270ENST00000513043 PHACTR2O75167 634 aa18.76■□□□□ 0.59
DDR1-270ENST00000513043 KLRC2P26717 231 aa18.76■□□□□ 0.59
DDR1-270ENST00000513043 AARSP49588 968 aaKnown RBP eCLIP18.76■□□□□ 0.59
DDR1-270ENST00000513043 SV2CQ496J9 727 aa18.76■□□□□ 0.59
DDR1-270ENST00000513043 VARS2Q5ST30 1063 aaKnown RBP18.76■□□□□ 0.59
DDR1-270ENST00000513043 C1orf220Q5T0J3 134 aa18.76■□□□□ 0.59
DDR1-270ENST00000513043 SASS6Q6UVJ0 657 aa18.76■□□□□ 0.59
DDR1-270ENST00000513043 LNX1Q8TBB1 728 aaPredicted RBP18.76■□□□□ 0.59
DDR1-270ENST00000513043 PIK3R5Q8WYR1 880 aa18.76■□□□□ 0.59
DDR1-270ENST00000513043 MED15Q96RN5 788 aa18.76■□□□□ 0.59
DDR1-270ENST00000513043 MKNK1Q9BUB5 465 aa18.76■□□□□ 0.59
DDR1-270ENST00000513043 RWDD2AQ9UIY3 292 aa18.76■□□□□ 0.59
DDR1-270ENST00000513043 PCDHB8Q9UN66 801 aa18.76■□□□□ 0.59
DDR1-270ENST00000513043 VWA8A3KMH1 1905 aa18.75■□□□□ 0.59
DDR1-270ENST00000513043 SCN1AP35498 2009 aa18.75■□□□□ 0.59
DDR1-270ENST00000513043 KPNA7A9QM74 516 aa18.75■□□□□ 0.59
DDR1-270ENST00000513043 M0QZQ0 153 aa18.75■□□□□ 0.59
DDR1-270ENST00000513043 CYB561D2O14569 222 aa18.75■□□□□ 0.59
DDR1-270ENST00000513043 SYN3O14994 580 aa18.75■□□□□ 0.59
DDR1-270ENST00000513043 SLC16A3O15427 465 aaKnown RBP18.75■□□□□ 0.59
DDR1-270ENST00000513043 CLSTN1O94985 981 aa18.75■□□□□ 0.59
DDR1-270ENST00000513043 CST3P01034 146 aaPredicted RBP18.75■□□□□ 0.59
DDR1-270ENST00000513043 GCLMP48507 274 aa18.75■□□□□ 0.59
DDR1-270ENST00000513043 CCDC40Q4G0X9 1142 aa18.75■□□□□ 0.59
DDR1-270ENST00000513043 DCAF17Q5H9S7 520 aaPredicted RBP18.75■□□□□ 0.59
DDR1-270ENST00000513043 TCERG1LQ5VWI1 586 aa18.75■□□□□ 0.59
DDR1-270ENST00000513043 TDRD10Q5VZ19 366 aaKnown RBP18.75■□□□□ 0.59
DDR1-270ENST00000513043 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.75■□□□□ 0.59
DDR1-270ENST00000513043 VN1R2Q8NFZ6 395 aa18.75■□□□□ 0.59
DDR1-270ENST00000513043 ELMO3Q96BJ8 720 aa18.75■□□□□ 0.59
DDR1-270ENST00000513043 BORCS6Q96GS4 357 aa18.75■□□□□ 0.59
DDR1-270ENST00000513043 CEP63Q96MT8 703 aa18.75■□□□□ 0.59
DDR1-270ENST00000513043 SRRTQ9BXP5 876 aaKnown RBP18.75■□□□□ 0.59
DDR1-270ENST00000513043 RXFP1Q9HBX9 757 aa18.75■□□□□ 0.59
DDR1-270ENST00000513043 DLL1O00548 723 aa18.74■□□□□ 0.59
DDR1-270ENST00000513043 ADAM12O43184 909 aa18.74■□□□□ 0.59
DDR1-270ENST00000513043 GLP2RO95838 553 aa18.74■□□□□ 0.59
DDR1-270ENST00000513043 C4BPAP04003 597 aaKnown RBP18.74■□□□□ 0.59
DDR1-270ENST00000513043 ODC1P11926 461 aa18.74■□□□□ 0.59
DDR1-270ENST00000513043 PTMSP20962 102 aa18.74■□□□□ 0.59
DDR1-270ENST00000513043 PNPLA4P41247 253 aa18.74■□□□□ 0.59
DDR1-270ENST00000513043 CLDN10P78369 228 aa18.74■□□□□ 0.59
DDR1-270ENST00000513043 PPP3CAQ08209 521 aa18.74■□□□□ 0.59
DDR1-270ENST00000513043 ADAM15Q13444 863 aa18.74■□□□□ 0.59
DDR1-270ENST00000513043 TRPC3Q13507 836 aa18.74■□□□□ 0.59
DDR1-270ENST00000513043 KLHL40Q2TBA0 621 aa18.74■□□□□ 0.59
DDR1-270ENST00000513043 USP37Q86T82 979 aa18.74■□□□□ 0.59
DDR1-270ENST00000513043 PALB2Q86YC2 1186 aa18.74■□□□□ 0.59
DDR1-270ENST00000513043 LRRC52Q8N7C0 313 aa18.74■□□□□ 0.59
DDR1-270ENST00000513043 EFHBQ8N7U6 833 aa18.74■□□□□ 0.59
DDR1-270ENST00000513043 APPL2Q8NEU8 664 aa18.74■□□□□ 0.59
DDR1-270ENST00000513043 SYAP1Q96A49 352 aaPredicted RBP18.74■□□□□ 0.59
DDR1-270ENST00000513043 HPDLQ96IR7 371 aa18.74■□□□□ 0.59
DDR1-270ENST00000513043 CDCA3Q99618 268 aaPredicted RBP18.74■□□□□ 0.59
DDR1-270ENST00000513043 CLSTN3Q9BQT9 956 aa18.74■□□□□ 0.59
DDR1-270ENST00000513043 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.74■□□□□ 0.59
DDR1-270ENST00000513043 DACH1Q9UI36 760 aa18.74■□□□□ 0.59
DDR1-270ENST00000513043 BARX2Q9UMQ3 279 aaPredicted RBP18.74■□□□□ 0.59
DDR1-270ENST00000513043 HCFC2Q9Y5Z7 792 aa18.74■□□□□ 0.59
DDR1-270ENST00000513043 VCANP13611 3396 aa18.74■□□□□ 0.59
DDR1-270ENST00000513043 ADH1AP07327 375 aa18.73■□□□□ 0.59
DDR1-270ENST00000513043 EPCAMP16422 314 aa18.73■□□□□ 0.59
DDR1-270ENST00000513043 NDUFV1P49821 464 aa18.73■□□□□ 0.59
DDR1-270ENST00000513043 AP3M2P53677 418 aa18.73■□□□□ 0.59
DDR1-270ENST00000513043 ARPP19P56211 112 aa18.73■□□□□ 0.59
DDR1-270ENST00000513043 MYL6P60660 151 aa18.73■□□□□ 0.59
DDR1-270ENST00000513043 DLX2Q07687 328 aaPredicted RBP18.73■□□□□ 0.59
DDR1-270ENST00000513043 MYO1EQ12965 1108 aa18.73■□□□□ 0.59
DDR1-270ENST00000513043 TPD52L1Q16890 204 aaPredicted RBP18.73■□□□□ 0.59
DDR1-270ENST00000513043 PDXDC1Q6P996 788 aa18.73■□□□□ 0.59
DDR1-270ENST00000513043 RSPO2Q6UXX9 243 aaPredicted RBP18.73■□□□□ 0.59
DDR1-270ENST00000513043 ANKS3Q6ZW76 656 aa18.73■□□□□ 0.59
DDR1-270ENST00000513043 SV2AQ7L0J3 742 aa18.73■□□□□ 0.59
DDR1-270ENST00000513043 FILIP1Q7Z7B0 1213 aa18.73■□□□□ 0.59
DDR1-270ENST00000513043 HLA-CQ95604 372 aa18.73■□□□□ 0.59
DDR1-270ENST00000513043 PABPC5Q96DU9 382 aaKnown RBP18.73■□□□□ 0.59
DDR1-270ENST00000513043 UBE2ZQ9H832 354 aaPredicted RBP18.73■□□□□ 0.59
DDR1-270ENST00000513043 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.73■□□□□ 0.59
DDR1-270ENST00000513043 FNIP2Q9P278 1114 aa18.73■□□□□ 0.59
DDR1-270ENST00000513043 MTRRQ9UBK8 725 aa18.73■□□□□ 0.59
DDR1-270ENST00000513043 ARMCX3Q9UH62 379 aaPredicted RBP18.73■□□□□ 0.59
DDR1-270ENST00000513043 SNX9Q9Y5X1 595 aa18.73■□□□□ 0.59
DDR1-270ENST00000513043 CDY1Q9Y6F8 540 aa18.73■□□□□ 0.59
DDR1-270ENST00000513043 CUL9Q8IWT3 2517 aa18.72■□□□□ 0.59
DDR1-270ENST00000513043 H3BQ06 376 aaPredicted RBP18.72■□□□□ 0.59
DDR1-270ENST00000513043 IKBKBO14920 756 aa18.72■□□□□ 0.59
DDR1-270ENST00000513043 TBX10O75333 385 aa18.72■□□□□ 0.59
DDR1-270ENST00000513043 VNN1O95497 513 aa18.72■□□□□ 0.59
DDR1-270ENST00000513043 SPATA31D3P0C874 917 aa18.72■□□□□ 0.59
DDR1-270ENST00000513043 KCNA5P22460 613 aa18.72■□□□□ 0.59
DDR1-270ENST00000513043 OR1D2P34982 312 aa18.72■□□□□ 0.59
DDR1-270ENST00000513043 CREMQ03060 361 aa18.72■□□□□ 0.59
DDR1-270ENST00000513043 TFF2Q03403 129 aa18.72■□□□□ 0.59
DDR1-270ENST00000513043 YWHAHQ04917 246 aaPredicted RBP18.72■□□□□ 0.59
DDR1-270ENST00000513043 NCOA4Q13772 614 aa18.72■□□□□ 0.59
DDR1-270ENST00000513043 CLUL1Q15846 466 aa18.72■□□□□ 0.59
DDR1-270ENST00000513043 CTC1Q2NKJ3 1217 aa18.72■□□□□ 0.59
DDR1-270ENST00000513043 ZACNQ401N2 412 aa18.72■□□□□ 0.59
DDR1-270ENST00000513043 CTXN3Q4LDR2 81 aa18.72■□□□□ 0.59
DDR1-270ENST00000513043 WSCD1Q658N2 575 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms