RNA–Protein interactions for RNA: ENST00000512620.5

CAST-238, Transcript of calpastatin, human

TSL 5

Gene CAST, Length 904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAST-238	ENST00000512620	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	4.21	□□□□□ -1.74
CAST-238	ENST00000512620	AGO3	Q9H9G7	860 aa	Known RBP	4.21	□□□□□ -1.74
CAST-238	ENST00000512620	IL23A	Q9NPF7	189 aa		4.21	□□□□□ -1.74
CAST-238	ENST00000512620	FEZ2	Q9UHY8	353 aa	Predicted RBP	4.21	□□□□□ -1.74
CAST-238	ENST00000512620	ANAPC4	Q9UJX5	808 aa		4.21	□□□□□ -1.74
CAST-238	ENST00000512620	TPCN1	Q9ULQ1	816 aa		4.21	□□□□□ -1.74
CAST-238	ENST00000512620	SNX13	Q9Y5W8	968 aa		4.21	□□□□□ -1.74
CAST-238	ENST00000512620	MORC2	Q9Y6X9	1032 aa	Predicted RBP	4.21	□□□□□ -1.74
CAST-238	ENST00000512620	RALGAPB	Q86X10	1494 aa		4.21	□□□□□ -1.74
CAST-238	ENST00000512620	PLEKHH2	Q8IVE3	1493 aa		4.21	□□□□□ -1.74
CAST-238	ENST00000512620	UHRF1BP1	Q6BDS2	1440 aa		4.21	□□□□□ -1.74
CAST-238	ENST00000512620	PZP	P20742	1482 aa		4.2	□□□□□ -1.74
CAST-238	ENST00000512620		A0A088AWK7	358 aa		4.2	□□□□□ -1.74
CAST-238	ENST00000512620		A0A1W2PPL8	197 aa		4.2	□□□□□ -1.74
CAST-238	ENST00000512620	hCG_1642624	A0A1W2PR95	340 aa		4.2	□□□□□ -1.74
CAST-238	ENST00000512620		A0A1W2PRX2	142 aa		4.2	□□□□□ -1.74
CAST-238	ENST00000512620	C9orf118	A6NHY6	69 aa		4.2	□□□□□ -1.74
CAST-238	ENST00000512620	GRM6	O15303	877 aa		4.2	□□□□□ -1.74
CAST-238	ENST00000512620	PHGDH	O43175	533 aa	Known RBP	4.2	□□□□□ -1.74
CAST-238	ENST00000512620	CDC14B	O60729	498 aa		4.2	□□□□□ -1.74
CAST-238	ENST00000512620	MYF5	P13349	255 aa		4.2	□□□□□ -1.74
CAST-238	ENST00000512620	ALOX15	P16050	662 aa	Predicted RBP	4.2	□□□□□ -1.74
CAST-238	ENST00000512620	HDC	P19113	662 aa		4.2	□□□□□ -1.74
CAST-238	ENST00000512620	PRIM2	P49643	509 aa		4.2	□□□□□ -1.74
CAST-238	ENST00000512620	NPEPPS	P55786	919 aa		4.2	□□□□□ -1.74
CAST-238	ENST00000512620	EXOSC9	Q06265	439 aa	Known RBP	4.2	□□□□□ -1.74
CAST-238	ENST00000512620	RIN1	Q13671	783 aa		4.2	□□□□□ -1.74
CAST-238	ENST00000512620	RAB39A	Q14964	217 aa		4.2	□□□□□ -1.74
CAST-238	ENST00000512620	PRR16	Q569H4	304 aa		4.2	□□□□□ -1.74
CAST-238	ENST00000512620	KHDC1L	Q5JSQ8	128 aa		4.2	□□□□□ -1.74
CAST-238	ENST00000512620	ZFYVE27	Q5T4F4	411 aa		4.2	□□□□□ -1.74
CAST-238	ENST00000512620	L1TD1	Q5T7N2	865 aa	Known RBP	4.2	□□□□□ -1.74
CAST-238	ENST00000512620	TCERG1L	Q5VWI1	586 aa		4.2	□□□□□ -1.74
CAST-238	ENST00000512620	CENPQ	Q7L2Z9	268 aa	Predicted RBP	4.2	□□□□□ -1.74
CAST-238	ENST00000512620	ZNF572	Q7Z3I7	529 aa	Predicted RBP	4.2	□□□□□ -1.74
CAST-238	ENST00000512620	LIX1L	Q8IVB5	337 aa		4.2	□□□□□ -1.74
CAST-238	ENST00000512620	GPR135	Q8IZ08	494 aa		4.2	□□□□□ -1.74
CAST-238	ENST00000512620	SHCBP1	Q8NEM2	672 aa		4.2	□□□□□ -1.74
CAST-238	ENST00000512620	PHKB	Q93100	1093 aa		4.2	□□□□□ -1.74
CAST-238	ENST00000512620	TRIM63	Q969Q1	353 aa		4.2	□□□□□ -1.74
CAST-238	ENST00000512620	ARL8A	Q96BM9	186 aa		4.2	□□□□□ -1.74
CAST-238	ENST00000512620	APIP	Q96GX9	242 aa		4.2	□□□□□ -1.74
CAST-238	ENST00000512620	ZC3H10	Q96K80	434 aa	Known RBP	4.2	□□□□□ -1.74
CAST-238	ENST00000512620	GNRHR2	Q96P88	292 aa		4.2	□□□□□ -1.74
CAST-238	ENST00000512620	P2RX7	Q99572	595 aa	Known RBP	4.2	□□□□□ -1.74
CAST-238	ENST00000512620	KCNH6	Q9H252	994 aa		4.2	□□□□□ -1.74
CAST-238	ENST00000512620	RRAGD	Q9NQL2	400 aa	Predicted RBP	4.2	□□□□□ -1.74
CAST-238	ENST00000512620	LUZP4	Q9P127	313 aa		4.2	□□□□□ -1.74
CAST-238	ENST00000512620	CPNE7	Q9UBL6	633 aa		4.2	□□□□□ -1.74
CAST-238	ENST00000512620	SLC23A1	Q9UHI7	598 aa		4.2	□□□□□ -1.74
CAST-238	ENST00000512620	PADI4	Q9UM07	663 aa		4.2	□□□□□ -1.74
CAST-238	ENST00000512620	JAG2	Q9Y219	1238 aa		4.2	□□□□□ -1.74
CAST-238	ENST00000512620	ARHGEF12	Q9NZN5	1544 aa		4.2	□□□□□ -1.74
CAST-238	ENST00000512620	DAPK1	P53355	1430 aa		4.2	□□□□□ -1.74
CAST-238	ENST00000512620	BLM	P54132	1417 aa	Predicted RBP	4.2	□□□□□ -1.74
CAST-238	ENST00000512620	LAMC3	Q9Y6N6	1575 aa		4.19	□□□□□ -1.74
CAST-238	ENST00000512620	GAPVD1	Q14C86	1478 aa		4.19	□□□□□ -1.74
CAST-238	ENST00000512620	ATRNL1	Q5VV63	1379 aa		4.19	□□□□□ -1.74
CAST-238	ENST00000512620	CXorf49	A8MYA2	514 aa	Predicted RBP	4.19	□□□□□ -1.74
CAST-238	ENST00000512620	NT5C1B-RDH14	C9J2C7	533 aa		4.19	□□□□□ -1.74
CAST-238	ENST00000512620	SLC26A4	O43511	780 aa		4.19	□□□□□ -1.74
CAST-238	ENST00000512620	NOBOX	O60393	691 aa		4.19	□□□□□ -1.74
CAST-238	ENST00000512620	CNOT4	O95628	575 aa	Known RBP	4.19	□□□□□ -1.74
CAST-238	ENST00000512620	GAST	P01350	101 aa		4.19	□□□□□ -1.74
CAST-238	ENST00000512620	BRAF	P15056	766 aa		4.19	□□□□□ -1.74
CAST-238	ENST00000512620	NPR1	P16066	1061 aa		4.19	□□□□□ -1.74
CAST-238	ENST00000512620	ATP5J	P18859	108 aa		4.19	□□□□□ -1.74
CAST-238	ENST00000512620	CD53	P19397	219 aa		4.19	□□□□□ -1.74
CAST-238	ENST00000512620	TNFSF4	P23510	183 aa		4.19	□□□□□ -1.74
CAST-238	ENST00000512620	PRDX5	P30044	214 aa		4.19	□□□□□ -1.74
CAST-238	ENST00000512620	SLC7A1	P30825	629 aa		4.19	□□□□□ -1.74
CAST-238	ENST00000512620	KCNC1	P48547	511 aa		4.19	□□□□□ -1.74
CAST-238	ENST00000512620	CCT5	P48643	541 aa		4.19	□□□□□ -1.74
CAST-238	ENST00000512620	GZMK	P49863	264 aa		4.19	□□□□□ -1.74
CAST-238	ENST00000512620	CTXN1	P60606	82 aa		4.19	□□□□□ -1.74
CAST-238	ENST00000512620	RAC3	P60763	192 aa		4.19	□□□□□ -1.74
CAST-238	ENST00000512620	CREM	Q03060	361 aa		4.19	□□□□□ -1.74
CAST-238	ENST00000512620	TNFAIP2	Q03169	654 aa		4.19	□□□□□ -1.74
CAST-238	ENST00000512620	BIRC3	Q13489	604 aa		4.19	□□□□□ -1.74
CAST-238	ENST00000512620	DGKK	Q5KSL6	1271 aa		4.19	□□□□□ -1.74
CAST-238	ENST00000512620	ZNF529	Q6P280	563 aa		4.19	□□□□□ -1.74
CAST-238	ENST00000512620	SPATA5	Q8NB90	893 aa		4.19	□□□□□ -1.74
CAST-238	ENST00000512620	RNF169	Q8NCN4	708 aa		4.19	□□□□□ -1.74
CAST-238	ENST00000512620	IL31RA	Q8NI17	732 aa		4.19	□□□□□ -1.74
CAST-238	ENST00000512620	CCT6B	Q92526	530 aa		4.19	□□□□□ -1.74
CAST-238	ENST00000512620	LPP	Q93052	612 aa		4.19	□□□□□ -1.74
CAST-238	ENST00000512620	CYFIP2	Q96F07	1278 aa		4.19	□□□□□ -1.74
CAST-238	ENST00000512620	NEIL1	Q96FI4	390 aa	Predicted RBP	4.19	□□□□□ -1.74
CAST-238	ENST00000512620	C20orf173	Q96LM9	149 aa		4.19	□□□□□ -1.74
CAST-238	ENST00000512620	CRB3	Q9BUF7	120 aa		4.19	□□□□□ -1.74
CAST-238	ENST00000512620	MRI1	Q9BV20	369 aa		4.19	□□□□□ -1.74
CAST-238	ENST00000512620	C11orf54	Q9H0W9	315 aa	Predicted RBP	4.19	□□□□□ -1.74
CAST-238	ENST00000512620	VPS11	Q9H270	941 aa		4.19	□□□□□ -1.74
CAST-238	ENST00000512620	CERS4	Q9HA82	394 aa		4.19	□□□□□ -1.74
CAST-238	ENST00000512620	KIAA1586	Q9HCI6	787 aa		4.19	□□□□□ -1.74
CAST-238	ENST00000512620	PNPLA8	Q9NP80	782 aa		4.19	□□□□□ -1.74
CAST-238	ENST00000512620	CASS4	Q9NQ75	786 aa		4.19	□□□□□ -1.74
CAST-238	ENST00000512620	JADE2	Q9NQC1	790 aa		4.19	□□□□□ -1.74
CAST-238	ENST00000512620	STARD7	Q9NQZ5	370 aa		4.19	□□□□□ -1.74
CAST-238	ENST00000512620	CNNM1	Q9NRU3	951 aa		4.19	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms