RNA–Protein interactions for RNA: ENST00000512617.6

PVT1-202, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 383 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-202ENST00000512617 H3BNC9 293 aa3.61□□□□□ -1.83
PVT1-202ENST00000512617 RNF225M0QZC1 329 aaPredicted RBP3.61□□□□□ -1.83
PVT1-202ENST00000512617 SOX1O00570 391 aaPredicted RBP3.61□□□□□ -1.83
PVT1-202ENST00000512617 SH2B2O14492 632 aaPredicted RBP3.61□□□□□ -1.83
PVT1-202ENST00000512617 FCHO1O14526 889 aa3.61□□□□□ -1.83
PVT1-202ENST00000512617 KCNK3O14649 394 aa3.61□□□□□ -1.83
PVT1-202ENST00000512617 ATXN7O15265 892 aaPredicted RBP3.61□□□□□ -1.83
PVT1-202ENST00000512617 FANCGO15287 622 aa3.61□□□□□ -1.83
PVT1-202ENST00000512617 PRPSAP2O60256 369 aa3.61□□□□□ -1.83
PVT1-202ENST00000512617 SYNCRIPO60506 623 aaKnown RBP3.61□□□□□ -1.83
PVT1-202ENST00000512617 NOL3O60936 208 aaKnown RBP3.61□□□□□ -1.83
PVT1-202ENST00000512617 PALMO75781 387 aa3.61□□□□□ -1.83
PVT1-202ENST00000512617 PIAS2O75928 621 aa3.61□□□□□ -1.83
PVT1-202ENST00000512617 BBOX1O75936 387 aa3.61□□□□□ -1.83
PVT1-202ENST00000512617 NDST3O95803 873 aa3.61□□□□□ -1.83
PVT1-202ENST00000512617 TK1P04183 234 aa3.61□□□□□ -1.83
PVT1-202ENST00000512617 ANXA2P07355 339 aaKnown RBP3.61□□□□□ -1.83
PVT1-202ENST00000512617 HEXBP07686 556 aa3.61□□□□□ -1.83
PVT1-202ENST00000512617 MMEP08473 750 aa3.61□□□□□ -1.83
PVT1-202ENST00000512617 TMEM253P0C7T8 217 aa3.61□□□□□ -1.83
PVT1-202ENST00000512617 TMIGD3P0DMS9 266 aaPredicted RBP3.61□□□□□ -1.83
PVT1-202ENST00000512617 LAMP2P13473 410 aa3.61□□□□□ -1.83
PVT1-202ENST00000512617 LCP1P13796 627 aa3.61□□□□□ -1.83
PVT1-202ENST00000512617 MAOBP27338 520 aa3.61□□□□□ -1.83
PVT1-202ENST00000512617 TMOD1P28289 359 aa3.61□□□□□ -1.83
PVT1-202ENST00000512617 PBLDP30039 288 aaPredicted RBP3.61□□□□□ -1.83
PVT1-202ENST00000512617 TLX1P31314 330 aaPredicted RBP3.61□□□□□ -1.83
PVT1-202ENST00000512617 KRT2P35908 639 aa3.61□□□□□ -1.83
PVT1-202ENST00000512617 MXI1P50539 228 aa3.61□□□□□ -1.83
PVT1-202ENST00000512617 ZNF41P51814 821 aaPredicted RBP3.61□□□□□ -1.83
PVT1-202ENST00000512617 AFF1P51825 1210 aaKnown RBP3.61□□□□□ -1.83
PVT1-202ENST00000512617 HK3P52790 923 aa3.61□□□□□ -1.83
PVT1-202ENST00000512617 PPP5CP53041 499 aa3.61□□□□□ -1.83
PVT1-202ENST00000512617 WDR4P57081 412 aaKnown RBP3.61□□□□□ -1.83
PVT1-202ENST00000512617 CCT2P78371 535 aaKnown RBP3.61□□□□□ -1.83
PVT1-202ENST00000512617 HTRA4P83105 476 aaPredicted RBP3.61□□□□□ -1.83
PVT1-202ENST00000512617 CDK17Q00537 523 aa3.61□□□□□ -1.83
PVT1-202ENST00000512617 YWHAHQ04917 246 aaPredicted RBP3.61□□□□□ -1.83
PVT1-202ENST00000512617 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.61□□□□□ -1.83
PVT1-202ENST00000512617 GALNT2Q10471 571 aa3.61□□□□□ -1.83
PVT1-202ENST00000512617 EIF2B5Q13144 721 aaKnown RBP3.61□□□□□ -1.83
PVT1-202ENST00000512617 NMIQ13287 307 aaPredicted RBP3.61□□□□□ -1.83
PVT1-202ENST00000512617 IL10RAQ13651 578 aa3.61□□□□□ -1.83
PVT1-202ENST00000512617 PUM1Q14671 1186 aaKnown RBP eCLIP3.61□□□□□ -1.83
PVT1-202ENST00000512617 ACAP1Q15027 740 aa3.61□□□□□ -1.83
PVT1-202ENST00000512617 RABEP1Q15276 862 aa3.61□□□□□ -1.83
PVT1-202ENST00000512617 TESK1Q15569 626 aa3.61□□□□□ -1.83
PVT1-202ENST00000512617 GPR68Q15743 365 aa3.61□□□□□ -1.83
PVT1-202ENST00000512617 TBCEQ15813 527 aaPredicted RBP3.61□□□□□ -1.83
PVT1-202ENST00000512617 IFI16Q16666 785 aaKnown RBP3.61□□□□□ -1.83
PVT1-202ENST00000512617 KIF4BQ2VIQ3 1234 aa3.61□□□□□ -1.83
PVT1-202ENST00000512617 TCP11X2Q5H9J9 407 aa3.61□□□□□ -1.83
PVT1-202ENST00000512617 C3orf38Q5JPI3 329 aa3.61□□□□□ -1.83
PVT1-202ENST00000512617 EFHC2Q5JST6 749 aa3.61□□□□□ -1.83
PVT1-202ENST00000512617 TJAP1Q5JTD0 557 aa3.61□□□□□ -1.83
PVT1-202ENST00000512617 IFFO2Q5TF58 517 aa3.61□□□□□ -1.83
PVT1-202ENST00000512617 ANGEL2Q5VTE6 544 aaKnown RBP3.61□□□□□ -1.83
PVT1-202ENST00000512617 INTS5Q6P9B9 1019 aaKnown RBP3.61□□□□□ -1.83
PVT1-202ENST00000512617 SLC30A9Q6PML9 568 aa3.61□□□□□ -1.83
PVT1-202ENST00000512617 FIP1L1Q6UN15 594 aaKnown RBP3.61□□□□□ -1.83
PVT1-202ENST00000512617 PET117Q6UWS5 81 aa3.61□□□□□ -1.83
PVT1-202ENST00000512617 ATF7IPQ6VMQ6 1270 aa3.61□□□□□ -1.83
PVT1-202ENST00000512617 CATSPERGQ6ZRH7 1159 aa3.61□□□□□ -1.83
PVT1-202ENST00000512617 ESPNLQ6ZVH7 1005 aa3.61□□□□□ -1.83
PVT1-202ENST00000512617 BBS12Q6ZW61 710 aa3.61□□□□□ -1.83
PVT1-202ENST00000512617 PLEKHM3Q6ZWE6 761 aa3.61□□□□□ -1.83
PVT1-202ENST00000512617 MIGA2Q7L4E1 593 aa3.61□□□□□ -1.83
PVT1-202ENST00000512617 PIWIL3Q7Z3Z3 882 aaKnown RBP3.61□□□□□ -1.83
PVT1-202ENST00000512617 PXKQ7Z7A4 578 aa3.61□□□□□ -1.83
PVT1-202ENST00000512617 TMEM110Q86TL2 294 aa3.61□□□□□ -1.83
PVT1-202ENST00000512617 DIS3L2Q8IYB7 885 aaKnown RBP3.61□□□□□ -1.83
PVT1-202ENST00000512617 ZBTB44Q8NCP5 570 aa3.61□□□□□ -1.83
PVT1-202ENST00000512617 AGBL5Q8NDL9 886 aa3.61□□□□□ -1.83
PVT1-202ENST00000512617 IL17RDQ8NFM7 739 aa3.61□□□□□ -1.83
PVT1-202ENST00000512617 CTCFLQ8NI51 663 aaPredicted RBP3.61□□□□□ -1.83
PVT1-202ENST00000512617 ZNF507Q8TCN5 953 aa3.61□□□□□ -1.83
PVT1-202ENST00000512617 DEPDC1BQ8WUY9 529 aa3.61□□□□□ -1.83
PVT1-202ENST00000512617 ZFAND2BQ8WV99 257 aa3.61□□□□□ -1.83
PVT1-202ENST00000512617 SHC3Q92529 594 aa3.61□□□□□ -1.83
PVT1-202ENST00000512617 COPS5Q92905 334 aa3.61□□□□□ -1.83
PVT1-202ENST00000512617 PTP4A1Q93096 173 aa3.61□□□□□ -1.83
PVT1-202ENST00000512617 CDCA5Q96FF9 252 aa3.61□□□□□ -1.83
PVT1-202ENST00000512617 NEIL1Q96FI4 390 aaPredicted RBP3.61□□□□□ -1.83
PVT1-202ENST00000512617 WDR89Q96FK6 387 aaPredicted RBP3.61□□□□□ -1.83
PVT1-202ENST00000512617 LRRC46Q96FV0 321 aa3.61□□□□□ -1.83
PVT1-202ENST00000512617 ZNF764Q96H86 408 aaPredicted RBP3.61□□□□□ -1.83
PVT1-202ENST00000512617 CLMNQ96JQ2 1002 aa3.61□□□□□ -1.83
PVT1-202ENST00000512617 PPP1R13BQ96KQ4 1090 aa3.61□□□□□ -1.83
PVT1-202ENST00000512617 AK8Q96MA6 479 aa3.61□□□□□ -1.83
PVT1-202ENST00000512617 NEK1Q96PY6 1258 aa3.61□□□□□ -1.83
PVT1-202ENST00000512617 TWNKQ96RR1 684 aa3.61□□□□□ -1.83
PVT1-202ENST00000512617 PRPF18Q99633 342 aaKnown RBP3.61□□□□□ -1.83
PVT1-202ENST00000512617 THUMPD3Q9BV44 507 aaKnown RBP3.61□□□□□ -1.83
PVT1-202ENST00000512617 RNPEPQ9H4A4 650 aa3.61□□□□□ -1.83
PVT1-202ENST00000512617 SOX17Q9H6I2 414 aaPredicted RBP3.61□□□□□ -1.83
PVT1-202ENST00000512617 MKNK2Q9HBH9 465 aa3.61□□□□□ -1.83
PVT1-202ENST00000512617 SMURF1Q9HCE7 757 aa3.61□□□□□ -1.83
PVT1-202ENST00000512617 TMEM8AQ9HCN3 771 aa3.61□□□□□ -1.83
PVT1-202ENST00000512617 SH2B1Q9NRF2 756 aaPredicted RBP3.61□□□□□ -1.83
PVT1-202ENST00000512617 LMBRD1Q9NUN5 540 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms