RNA–Protein interactions for RNA: ENST00000512040.1

MATR3-219, Transcript of matrin 3, humanhuman

TSL 3

Gene MATR3, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-219ENST00000512040 RNF214Q8ND24 703 aa4.79□□□□□ -1.64
MATR3-219ENST00000512040 ANKRD20A12PQ8NF67 263 aa4.79□□□□□ -1.64
MATR3-219ENST00000512040 ELOA3Q8NG57 546 aa4.79□□□□□ -1.64
MATR3-219ENST00000512040 CTCFLQ8NI51 663 aaPredicted RBP4.79□□□□□ -1.64
MATR3-219ENST00000512040 NSUN6Q8TEA1 469 aaKnown RBP4.79□□□□□ -1.64
MATR3-219ENST00000512040 TRPC4APQ8TEL6 797 aa4.79□□□□□ -1.64
MATR3-219ENST00000512040 EDARADDQ8WWZ3 215 aa4.79□□□□□ -1.64
MATR3-219ENST00000512040 TNFRSF25Q93038 417 aa4.79□□□□□ -1.64
MATR3-219ENST00000512040 SDCCAG3Q96C92 435 aa4.79□□□□□ -1.64
MATR3-219ENST00000512040 THOC1Q96FV9 657 aaKnown RBP4.79□□□□□ -1.64
MATR3-219ENST00000512040 MAML3Q96JK9 1138 aa4.79□□□□□ -1.64
MATR3-219ENST00000512040 JAKMIP1Q96N16 626 aaKnown RBP4.79□□□□□ -1.64
MATR3-219ENST00000512040 SMAD5Q99717 465 aaKnown RBP4.79□□□□□ -1.64
MATR3-219ENST00000512040 BARD1Q99728 777 aaKnown RBP4.79□□□□□ -1.64
MATR3-219ENST00000512040 CHCHD6Q9BRQ6 235 aa4.79□□□□□ -1.64
MATR3-219ENST00000512040 YIPF4Q9BSR8 244 aa4.79□□□□□ -1.64
MATR3-219ENST00000512040 KRTAP4-5Q9BYR2 181 aa4.79□□□□□ -1.64
MATR3-219ENST00000512040 EDEM3Q9BZQ6 932 aa4.79□□□□□ -1.64
MATR3-219ENST00000512040 TSGA10Q9BZW7 698 aa4.79□□□□□ -1.64
MATR3-219ENST00000512040 API5Q9BZZ5 524 aaKnown RBP4.79□□□□□ -1.64
MATR3-219ENST00000512040 GBP3Q9H0R5 595 aa4.79□□□□□ -1.64
MATR3-219ENST00000512040 WNT5BQ9H1J7 359 aa4.79□□□□□ -1.64
MATR3-219ENST00000512040 TMEM165Q9HC07 324 aa4.79□□□□□ -1.64
MATR3-219ENST00000512040 LUC7LQ9NQ29 371 aaKnown RBP4.79□□□□□ -1.64
MATR3-219ENST00000512040 CNNM1Q9NRU3 951 aa4.79□□□□□ -1.64
MATR3-219ENST00000512040 SPATS2LQ9NUQ6 558 aaKnown RBP4.79□□□□□ -1.64
MATR3-219ENST00000512040 TMED5Q9Y3A6 229 aa4.79□□□□□ -1.64
MATR3-219ENST00000512040 CHTOPQ9Y3Y2 248 aaKnown RBP4.79□□□□□ -1.64
MATR3-219ENST00000512040 SLC4A4Q9Y6R1 1079 aa4.79□□□□□ -1.64
MATR3-219ENST00000512040 PTPRFP10586 1907 aa4.79□□□□□ -1.64
MATR3-219ENST00000512040 A0A0B4J269 797 aa4.78□□□□□ -1.64
MATR3-219ENST00000512040 LRRC10BA6NIK2 292 aa4.78□□□□□ -1.64
MATR3-219ENST00000512040 ADARB2-AS1A8MUL3 147 aa4.78□□□□□ -1.64
MATR3-219ENST00000512040 TTC34A8MYJ7 566 aa4.78□□□□□ -1.64
MATR3-219ENST00000512040 SHISA8B8ZZ34 492 aa4.78□□□□□ -1.64
MATR3-219ENST00000512040 L7N2F9 121 aa4.78□□□□□ -1.64
MATR3-219ENST00000512040 PDLIM1O00151 329 aa4.78□□□□□ -1.64
MATR3-219ENST00000512040 YKT6O15498 198 aa4.78□□□□□ -1.64
MATR3-219ENST00000512040 SPOPO43791 374 aa4.78□□□□□ -1.64
MATR3-219ENST00000512040 RFPL3O75679 317 aa4.78□□□□□ -1.64
MATR3-219ENST00000512040 EPN2O95208 641 aa4.78□□□□□ -1.64
MATR3-219ENST00000512040 GOSR1O95249 250 aa4.78□□□□□ -1.64
MATR3-219ENST00000512040 TRIM16O95361 564 aa4.78□□□□□ -1.64
MATR3-219ENST00000512040 CPP00450 1065 aa4.78□□□□□ -1.64
MATR3-219ENST00000512040 GHRHP01286 108 aa4.78□□□□□ -1.64
MATR3-219ENST00000512040 DLATP10515 647 aaKnown RBP4.78□□□□□ -1.64
MATR3-219ENST00000512040 ACPPP15309 386 aa4.78□□□□□ -1.64
MATR3-219ENST00000512040 ZKSCAN1P17029 563 aaPredicted RBP4.78□□□□□ -1.64
MATR3-219ENST00000512040 ARF4P18085 180 aaPredicted RBP4.78□□□□□ -1.64
MATR3-219ENST00000512040 ALAS2P22557 587 aa4.78□□□□□ -1.64
MATR3-219ENST00000512040 AMPD1P23109 780 aa4.78□□□□□ -1.64
MATR3-219ENST00000512040 SFPQP23246 707 aaKnown RBP eCLIP4.78□□□□□ -1.64
MATR3-219ENST00000512040 CTGFP29279 349 aa4.78□□□□□ -1.64
MATR3-219ENST00000512040 GBP2P32456 591 aaPredicted RBP4.78□□□□□ -1.64
MATR3-219ENST00000512040 ABCG1P45844 678 aa4.78□□□□□ -1.64
MATR3-219ENST00000512040 MTIF2P46199 727 aaKnown RBP4.78□□□□□ -1.64
MATR3-219ENST00000512040 SOX9P48436 509 aa4.78□□□□□ -1.64
MATR3-219ENST00000512040 IFNAR2P48551 515 aa4.78□□□□□ -1.64
MATR3-219ENST00000512040 MCM2P49736 904 aa4.78□□□□□ -1.64
MATR3-219ENST00000512040 SULT1E1P49888 294 aa4.78□□□□□ -1.64
MATR3-219ENST00000512040 ALDH3A2P51648 485 aa4.78□□□□□ -1.64
MATR3-219ENST00000512040 MNAT1P51948 309 aa4.78□□□□□ -1.64
MATR3-219ENST00000512040 CCNA1P78396 465 aa4.78□□□□□ -1.64
MATR3-219ENST00000512040 COG7P83436 770 aa4.78□□□□□ -1.64
MATR3-219ENST00000512040 FOXO4P98177 505 aa4.78□□□□□ -1.64
MATR3-219ENST00000512040 DR1Q01658 176 aa4.78□□□□□ -1.64
MATR3-219ENST00000512040 MAP3K10Q02779 954 aa4.78□□□□□ -1.64
MATR3-219ENST00000512040 CDC16Q13042 620 aa4.78□□□□□ -1.64
MATR3-219ENST00000512040 PABPC4Q13310 644 aaKnown RBP eCLIP4.78□□□□□ -1.64
MATR3-219ENST00000512040 COL9A2Q14055 689 aaPredicted RBP4.78□□□□□ -1.64
MATR3-219ENST00000512040 PDE3AQ14432 1141 aa4.78□□□□□ -1.64
MATR3-219ENST00000512040 GRM3Q14832 879 aa4.78□□□□□ -1.64
MATR3-219ENST00000512040 PPA1Q15181 289 aa4.78□□□□□ -1.64
MATR3-219ENST00000512040 MEA1Q16626 185 aa4.78□□□□□ -1.64
MATR3-219ENST00000512040 PTPN21Q16825 1174 aa4.78□□□□□ -1.64
MATR3-219ENST00000512040 DDR2Q16832 855 aa4.78□□□□□ -1.64
MATR3-219ENST00000512040 SMUG1Q53HV7 270 aa4.78□□□□□ -1.64
MATR3-219ENST00000512040 ODF2Q5BJF6 829 aa4.78□□□□□ -1.64
MATR3-219ENST00000512040 ZMYM1Q5SVZ6 1142 aa4.78□□□□□ -1.64
MATR3-219ENST00000512040 CCDC183Q5T5S1 534 aa4.78□□□□□ -1.64
MATR3-219ENST00000512040 RNF219Q5W0B1 726 aaPredicted RBP4.78□□□□□ -1.64
MATR3-219ENST00000512040 ZNF385CQ66K41 422 aaPredicted RBP4.78□□□□□ -1.64
MATR3-219ENST00000512040 INTS3Q68E01 1043 aaKnown RBP4.78□□□□□ -1.64
MATR3-219ENST00000512040 NAA16Q6N069 864 aaPredicted RBP4.78□□□□□ -1.64
MATR3-219ENST00000512040 ALKBH5Q6P6C2 394 aaKnown RBP4.78□□□□□ -1.64
MATR3-219ENST00000512040 DRICH1Q6PGQ1 229 aaPredicted RBP4.78□□□□□ -1.64
MATR3-219ENST00000512040 APOBEC3FQ8IUX4 373 aaKnown RBP4.78□□□□□ -1.64
MATR3-219ENST00000512040 TRMT2AQ8IZ69 625 aaKnown RBP4.78□□□□□ -1.64
MATR3-219ENST00000512040 SVOPQ8N4V2 548 aa4.78□□□□□ -1.64
MATR3-219ENST00000512040 CRACR2BQ8N4Y2 399 aaPredicted RBP4.78□□□□□ -1.64
MATR3-219ENST00000512040 OR6C4Q8NGE1 309 aa4.78□□□□□ -1.64
MATR3-219ENST00000512040 OR52K1Q8NGK4 314 aa4.78□□□□□ -1.64
MATR3-219ENST00000512040 CD99L2Q8TCZ2 262 aa4.78□□□□□ -1.64
MATR3-219ENST00000512040 SSH1Q8WYL5 1049 aa4.78□□□□□ -1.64
MATR3-219ENST00000512040 TRIM63Q969Q1 353 aa4.78□□□□□ -1.64
MATR3-219ENST00000512040 SLC35B4Q969S0 331 aa4.78□□□□□ -1.64
MATR3-219ENST00000512040 PMEPA1Q969W9 287 aa4.78□□□□□ -1.64
MATR3-219ENST00000512040 SHISA4Q96DD7 197 aa4.78□□□□□ -1.64
MATR3-219ENST00000512040 MTMR8Q96EF0 704 aa4.78□□□□□ -1.64
MATR3-219ENST00000512040 SPATA17Q96L03 361 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms