RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 CSGALNACT1Q8TDX6 532 aa20.87■□□□□ 0.93
HMGCS1-206ENST00000511774 ZNF512Q96ME7 567 aaPredicted RBP20.87■□□□□ 0.93
HMGCS1-206ENST00000511774 CDT1Q9H211 546 aa20.87■□□□□ 0.93
HMGCS1-206ENST00000511774 ASAH2Q9NR71 780 aa20.87■□□□□ 0.93
HMGCS1-206ENST00000511774 POLR3BQ9NW08 1133 aaPredicted RBP20.87■□□□□ 0.93
HMGCS1-206ENST00000511774 GTSE1Q9NYZ3 720 aa20.87■□□□□ 0.93
HMGCS1-206ENST00000511774 AFF4Q9UHB7 1163 aaKnown RBP20.87■□□□□ 0.93
HMGCS1-206ENST00000511774 CYP46A1Q9Y6A2 500 aa20.87■□□□□ 0.93
HMGCS1-206ENST00000511774 DMXL2Q8TDJ6 3036 aa20.86■□□□□ 0.93
HMGCS1-206ENST00000511774 NBEAQ8NFP9 2946 aa20.86■□□□□ 0.93
HMGCS1-206ENST00000511774 A0A1W2PRU2 124 aa20.86■□□□□ 0.93
HMGCS1-206ENST00000511774 FOXD2O60548 495 aaPredicted RBP20.86■□□□□ 0.93
HMGCS1-206ENST00000511774 EPN2O95208 641 aa20.86■□□□□ 0.93
HMGCS1-206ENST00000511774 FDPSP14324 419 aaKnown RBP20.86■□□□□ 0.93
HMGCS1-206ENST00000511774 PLA2G2CQ5R387 149 aa20.86■□□□□ 0.93
HMGCS1-206ENST00000511774 IQCEQ6IPM2 695 aa20.86■□□□□ 0.93
HMGCS1-206ENST00000511774 SUSD3Q96L08 255 aa20.86■□□□□ 0.93
HMGCS1-206ENST00000511774 SLITRK6Q9H5Y7 841 aa20.86■□□□□ 0.93
HMGCS1-206ENST00000511774 C8orf33Q9H7E9 229 aaPredicted RBP20.86■□□□□ 0.93
HMGCS1-206ENST00000511774 YIPF1Q9Y548 306 aa20.86■□□□□ 0.93
HMGCS1-206ENST00000511774 H7C4K7 107 aa20.85■□□□□ 0.93
HMGCS1-206ENST00000511774 NEMFO60524 1076 aa20.85■□□□□ 0.93
HMGCS1-206ENST00000511774 KRT2P35908 639 aa20.85■□□□□ 0.93
HMGCS1-206ENST00000511774 GRM5P41594 1212 aa20.85■□□□□ 0.93
HMGCS1-206ENST00000511774 TNK2Q07912 1038 aa20.85■□□□□ 0.93
HMGCS1-206ENST00000511774 DGKKQ5KSL6 1271 aa20.85■□□□□ 0.93
HMGCS1-206ENST00000511774 TCEAL6Q6IPX3 200 aa20.85■□□□□ 0.93
HMGCS1-206ENST00000511774 ELMOD1Q8N336 334 aa20.85■□□□□ 0.93
HMGCS1-206ENST00000511774 C12orf50Q8NA57 414 aaPredicted RBP20.85■□□□□ 0.93
HMGCS1-206ENST00000511774 TCEAL3Q969E4 200 aa20.85■□□□□ 0.93
HMGCS1-206ENST00000511774 LSM14BQ9BX40 385 aaKnown RBP20.85■□□□□ 0.93
HMGCS1-206ENST00000511774 PTPRHQ9HD43 1115 aa20.85■□□□□ 0.93
HMGCS1-206ENST00000511774 TUFT1Q9NNX1 390 aa20.85■□□□□ 0.93
HMGCS1-206ENST00000511774 SH2B1Q9NRF2 756 aaPredicted RBP20.85■□□□□ 0.93
HMGCS1-206ENST00000511774 GIPC1O14908 333 aa20.84■□□□□ 0.93
HMGCS1-206ENST00000511774 OR4Q2P0C623 313 aa20.84■□□□□ 0.93
HMGCS1-206ENST00000511774 TAS1R3Q7RTX0 852 aa20.84■□□□□ 0.93
HMGCS1-206ENST00000511774 ARID3BQ8IVW6 561 aaPredicted RBP20.84■□□□□ 0.93
HMGCS1-206ENST00000511774 YAF2Q8IY57 180 aa20.84■□□□□ 0.93
HMGCS1-206ENST00000511774 BEST2Q8NFU1 509 aa20.84■□□□□ 0.93
HMGCS1-206ENST00000511774 GAB3Q8WWW8 586 aa20.84■□□□□ 0.93
HMGCS1-206ENST00000511774 MSANTD3Q96H12 275 aa20.84■□□□□ 0.93
HMGCS1-206ENST00000511774 ORC3Q9UBD5 711 aaPredicted RBP20.84■□□□□ 0.93
HMGCS1-206ENST00000511774 ZMIZ1Q9ULJ6 1067 aa20.84■□□□□ 0.93
HMGCS1-206ENST00000511774 TNFSF13BQ9Y275 285 aa20.84■□□□□ 0.93
HMGCS1-206ENST00000511774 BTBD18B2RXH4 712 aa20.83■□□□□ 0.93
HMGCS1-206ENST00000511774 ABLIM1O14639 778 aa20.83■□□□□ 0.93
HMGCS1-206ENST00000511774 XBP1P17861 261 aa20.83■□□□□ 0.93
HMGCS1-206ENST00000511774 CACNB1Q02641 598 aaPredicted RBP20.83■□□□□ 0.93
HMGCS1-206ENST00000511774 ECM1Q16610 540 aa20.83■□□□□ 0.93
HMGCS1-206ENST00000511774 PSAPL1Q6NUJ1 521 aa20.83■□□□□ 0.93
HMGCS1-206ENST00000511774 GAREM2Q75VX8 874 aa20.83■□□□□ 0.93
HMGCS1-206ENST00000511774 RALGPS2Q86X27 583 aaPredicted RBP20.83■□□□□ 0.93
HMGCS1-206ENST00000511774 LEMD2Q8NC56 503 aa20.83■□□□□ 0.93
HMGCS1-206ENST00000511774 DDX12PQ92771 950 aa20.83■□□□□ 0.93
HMGCS1-206ENST00000511774 LOXL4Q96JB6 756 aa20.83■□□□□ 0.93
HMGCS1-206ENST00000511774 TBC1D32Q96NH3 1257 aa20.83■□□□□ 0.93
HMGCS1-206ENST00000511774 NACC1Q96RE7 527 aa20.83■□□□□ 0.93
HMGCS1-206ENST00000511774 ACO2Q99798 780 aaKnown RBP20.83■□□□□ 0.93
HMGCS1-206ENST00000511774 TMEM121BQ9BXQ6 578 aaPredicted RBP20.83■□□□□ 0.93
HMGCS1-206ENST00000511774 TPCN1Q9ULQ1 816 aa20.83■□□□□ 0.93
HMGCS1-206ENST00000511774 WASF3Q9UPY6 502 aa20.83■□□□□ 0.93
HMGCS1-206ENST00000511774 RPP40O75818 363 aaKnown RBP20.82■□□□□ 0.92
HMGCS1-206ENST00000511774 CDKL5O76039 1030 aa20.82■□□□□ 0.92
HMGCS1-206ENST00000511774 PRAMEF12O95522 483 aa20.82■□□□□ 0.92
HMGCS1-206ENST00000511774 TOP3BO95985 862 aaKnown RBP20.82■□□□□ 0.92
HMGCS1-206ENST00000511774 KCNE1P15382 129 aa20.82■□□□□ 0.92
HMGCS1-206ENST00000511774 SPINK2P20155 84 aa20.82■□□□□ 0.92
HMGCS1-206ENST00000511774 ZNF280DQ6N043 979 aa20.82■□□□□ 0.92
HMGCS1-206ENST00000511774 ABCA7Q8IZY2 2146 aa20.82■□□□□ 0.92
HMGCS1-206ENST00000511774 TTC9BQ8N6N2 239 aa20.82■□□□□ 0.92
HMGCS1-206ENST00000511774 E2F7Q96AV8 911 aa20.82■□□□□ 0.92
HMGCS1-206ENST00000511774 CHFRQ96EP1 664 aa20.82■□□□□ 0.92
HMGCS1-206ENST00000511774 PGLYRP2Q96PD5 576 aa20.82■□□□□ 0.92
HMGCS1-206ENST00000511774 POLR3CQ9BUI4 534 aaPredicted RBP20.82■□□□□ 0.92
HMGCS1-206ENST00000511774 TM6SF1Q9BZW5 370 aa20.82■□□□□ 0.92
HMGCS1-206ENST00000511774 PDRG1Q9NUG6 133 aa20.82■□□□□ 0.92
HMGCS1-206ENST00000511774 NUB1Q9Y5A7 615 aa20.82■□□□□ 0.92
HMGCS1-206ENST00000511774 ITPR1Q14643 2758 aa20.81■□□□□ 0.92
HMGCS1-206ENST00000511774 ARHGEF35A5YM69 484 aa20.81■□□□□ 0.92
HMGCS1-206ENST00000511774 PFKFB2O60825 505 aa20.81■□□□□ 0.92
HMGCS1-206ENST00000511774 CPB1P15086 417 aa20.81■□□□□ 0.92
HMGCS1-206ENST00000511774 EFNA5P52803 228 aa20.81■□□□□ 0.92
HMGCS1-206ENST00000511774 ZNF568Q3ZCX4 644 aa20.81■□□□□ 0.92
HMGCS1-206ENST00000511774 UNQ6494/PRO21346Q6UXR6 183 aa20.81■□□□□ 0.92
HMGCS1-206ENST00000511774 CACNA2D4Q7Z3S7 1137 aa20.81■□□□□ 0.92
HMGCS1-206ENST00000511774 CCDC94Q9BW85 323 aaPredicted RBP20.81■□□□□ 0.92
HMGCS1-206ENST00000511774 GPR88Q9GZN0 384 aa20.81■□□□□ 0.92
HMGCS1-206ENST00000511774 SLC38A7Q9NVC3 462 aa20.81■□□□□ 0.92
HMGCS1-206ENST00000511774 CNTN3Q9P232 1028 aa20.81■□□□□ 0.92
HMGCS1-206ENST00000511774 TUBGCP4Q9UGJ1 667 aa20.81■□□□□ 0.92
HMGCS1-206ENST00000511774 TIMM13Q9Y5L4 95 aaPredicted RBP20.81■□□□□ 0.92
HMGCS1-206ENST00000511774 NUP205Q92621 2012 aa20.81■□□□□ 0.92
HMGCS1-206ENST00000511774 ANK1P16157 1881 aa20.81■□□□□ 0.92
HMGCS1-206ENST00000511774 SOAT2O75908 522 aa20.8■□□□□ 0.92
HMGCS1-206ENST00000511774 MCM4P33991 863 aa20.8■□□□□ 0.92
HMGCS1-206ENST00000511774 MPLP40238 635 aa20.8■□□□□ 0.92
HMGCS1-206ENST00000511774 FOSBP53539 338 aa20.8■□□□□ 0.92
HMGCS1-206ENST00000511774 YARSP54577 528 aaKnown RBP20.8■□□□□ 0.92
HMGCS1-206ENST00000511774 DUSP4Q13115 394 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms