RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 AGXTP21549 392 aa4.66□□□□□ -1.66
TOPBP1-208ENST00000511439 PTGS2P35354 604 aa4.66□□□□□ -1.66
TOPBP1-208ENST00000511439 MAN2A2P49641 1150 aa4.66□□□□□ -1.66
TOPBP1-208ENST00000511439 ATP2C1P98194 919 aaPredicted RBP4.66□□□□□ -1.66
TOPBP1-208ENST00000511439 CD69Q07108 199 aa4.66□□□□□ -1.66
TOPBP1-208ENST00000511439 TTF1Q15361 905 aaPredicted RBP4.66□□□□□ -1.66
TOPBP1-208ENST00000511439 PCBP2Q15366 365 aaKnown RBP eCLIP4.66□□□□□ -1.66
TOPBP1-208ENST00000511439 ANO4Q32M45 955 aa4.66□□□□□ -1.66
TOPBP1-208ENST00000511439 MFSD5Q6N075 450 aa4.66□□□□□ -1.66
TOPBP1-208ENST00000511439 ULK2Q8IYT8 1036 aa4.66□□□□□ -1.66
TOPBP1-208ENST00000511439 SSH1Q8WYL5 1049 aa4.66□□□□□ -1.66
TOPBP1-208ENST00000511439 CHMP4CQ96CF2 233 aa4.66□□□□□ -1.66
TOPBP1-208ENST00000511439 MKS1Q9NXB0 559 aa4.66□□□□□ -1.66
TOPBP1-208ENST00000511439 PCDHGA9Q9Y5G4 932 aaKnown RBP4.66□□□□□ -1.66
TOPBP1-208ENST00000511439 PCDHGA8Q9Y5G5 932 aa4.66□□□□□ -1.66
TOPBP1-208ENST00000511439 PCDHGA7Q9Y5G6 932 aa4.66□□□□□ -1.66
TOPBP1-208ENST00000511439 PCDHGA6Q9Y5G7 932 aa4.66□□□□□ -1.66
TOPBP1-208ENST00000511439 PCDHGA3Q9Y5H0 932 aa4.66□□□□□ -1.66
TOPBP1-208ENST00000511439 PCDHGA2Q9Y5H1 932 aa4.66□□□□□ -1.66
TOPBP1-208ENST00000511439 GPR45Q9Y5Y3 372 aa4.66□□□□□ -1.66
TOPBP1-208ENST00000511439 RPGRIP1LQ68CZ1 1315 aa4.66□□□□□ -1.66
TOPBP1-208ENST00000511439 ANKRD36BQ8N2N9 1353 aa4.65□□□□□ -1.66
TOPBP1-208ENST00000511439 USP47Q96K76 1375 aa4.65□□□□□ -1.66
TOPBP1-208ENST00000511439 MKI67P46013 3256 aaKnown RBP4.65□□□□□ -1.66
TOPBP1-208ENST00000511439 VCANP13611 3396 aa4.65□□□□□ -1.66
TOPBP1-208ENST00000511439 KLHL33A6NCF5 533 aa4.65□□□□□ -1.67
TOPBP1-208ENST00000511439 C2orf78A6NCI8 922 aa4.65□□□□□ -1.67
TOPBP1-208ENST00000511439 PPFIA4O75335 1185 aa4.65□□□□□ -1.67
TOPBP1-208ENST00000511439 FSBPO95073 299 aa4.65□□□□□ -1.67
TOPBP1-208ENST00000511439 LY86O95711 162 aa4.65□□□□□ -1.67
TOPBP1-208ENST00000511439 S100BP04271 92 aaPredicted RBP4.65□□□□□ -1.67
TOPBP1-208ENST00000511439 GAAP10253 952 aa4.65□□□□□ -1.67
TOPBP1-208ENST00000511439 OSMP13725 252 aa4.65□□□□□ -1.67
TOPBP1-208ENST00000511439 XPAP23025 273 aaPredicted RBP4.65□□□□□ -1.67
TOPBP1-208ENST00000511439 SLC5A3P53794 718 aa4.65□□□□□ -1.67
TOPBP1-208ENST00000511439 NRG3P56975 720 aa4.65□□□□□ -1.67
TOPBP1-208ENST00000511439 BPIFB4P59827 614 aa4.65□□□□□ -1.67
TOPBP1-208ENST00000511439 CDK17Q00537 523 aa4.65□□□□□ -1.67
TOPBP1-208ENST00000511439 MCL1Q07820 350 aa4.65□□□□□ -1.67
TOPBP1-208ENST00000511439 TCIRG1Q13488 830 aa4.65□□□□□ -1.67
TOPBP1-208ENST00000511439 SAFB2Q14151 953 aaKnown RBP eCLIP4.65□□□□□ -1.67
TOPBP1-208ENST00000511439 CLUL1Q15846 466 aa4.65□□□□□ -1.67
TOPBP1-208ENST00000511439 ODR4Q5SWX8 454 aa4.65□□□□□ -1.67
TOPBP1-208ENST00000511439 FAM111BQ6SJ93 734 aa4.65□□□□□ -1.67
TOPBP1-208ENST00000511439 CLEC14AQ86T13 490 aa4.65□□□□□ -1.67
TOPBP1-208ENST00000511439 ZNF575Q86XF7 245 aa4.65□□□□□ -1.67
TOPBP1-208ENST00000511439 GLB1L2Q8IW92 636 aa4.65□□□□□ -1.67
TOPBP1-208ENST00000511439 JADE3Q92613 823 aa4.65□□□□□ -1.67
TOPBP1-208ENST00000511439 ZG16BQ96DA0 208 aa4.65□□□□□ -1.67
TOPBP1-208ENST00000511439 TCF25Q9BQ70 676 aa4.65□□□□□ -1.67
TOPBP1-208ENST00000511439 IFT122Q9HBG6 1241 aa4.65□□□□□ -1.67
TOPBP1-208ENST00000511439 METTL14Q9HCE5 456 aaKnown RBP4.65□□□□□ -1.67
TOPBP1-208ENST00000511439 SAGE1Q9NXZ1 904 aa4.65□□□□□ -1.67
TOPBP1-208ENST00000511439 STXBP5LQ9Y2K9 1186 aa4.65□□□□□ -1.67
TOPBP1-208ENST00000511439 RBM8AQ9Y5S9 174 aaKnown RBP4.65□□□□□ -1.67
TOPBP1-208ENST00000511439 MRFAP1Q9Y605 127 aa4.65□□□□□ -1.67
TOPBP1-208ENST00000511439 TRIOBPQ9H2D6 2365 aa4.65□□□□□ -1.67
TOPBP1-208ENST00000511439 PPLO60437 1756 aa4.65□□□□□ -1.67
TOPBP1-208ENST00000511439 KIF1BO60333 1816 aa4.65□□□□□ -1.67
TOPBP1-208ENST00000511439 NSD2O96028 1365 aa4.65□□□□□ -1.67
TOPBP1-208ENST00000511439 TOGARAM1Q9Y4F4 1720 aa4.64□□□□□ -1.67
TOPBP1-208ENST00000511439 A0A1W2PR48 441 aa4.64□□□□□ -1.67
TOPBP1-208ENST00000511439 GOLGA6L6A8MZA4 724 aa4.64□□□□□ -1.67
TOPBP1-208ENST00000511439 DAPK3O43293 454 aa4.64□□□□□ -1.67
TOPBP1-208ENST00000511439 KCNA3P22001 575 aa4.64□□□□□ -1.67
TOPBP1-208ENST00000511439 NANOS3P60323 173 aaKnown RBP4.64□□□□□ -1.67
TOPBP1-208ENST00000511439 MGAT5Q09328 741 aa4.64□□□□□ -1.67
TOPBP1-208ENST00000511439 ODF1Q14990 250 aa4.64□□□□□ -1.67
TOPBP1-208ENST00000511439 ELAVL1Q15717 326 aaKnown RBP4.64□□□□□ -1.67
TOPBP1-208ENST00000511439 ADRM1Q16186 407 aa4.64□□□□□ -1.67
TOPBP1-208ENST00000511439 MBNL2Q5VZF2 373 aaKnown RBP4.64□□□□□ -1.67
TOPBP1-208ENST00000511439 LMBR1LQ6UX01 489 aa4.64□□□□□ -1.67
TOPBP1-208ENST00000511439 SMIM5Q71RC9 77 aa4.64□□□□□ -1.67
TOPBP1-208ENST00000511439 ZBTB46Q86UZ6 589 aa4.64□□□□□ -1.67
TOPBP1-208ENST00000511439 DNAJC10Q8IXB1 793 aa4.64□□□□□ -1.67
TOPBP1-208ENST00000511439 UNC5BQ8IZJ1 945 aa4.64□□□□□ -1.67
TOPBP1-208ENST00000511439 CNTROBQ8N137 903 aa4.64□□□□□ -1.67
TOPBP1-208ENST00000511439 ANKRD53Q8N9V6 530 aa4.64□□□□□ -1.67
TOPBP1-208ENST00000511439 PLA2G15Q8NCC3 412 aa4.64□□□□□ -1.67
TOPBP1-208ENST00000511439 PIK3C3Q8NEB9 887 aa4.64□□□□□ -1.67
TOPBP1-208ENST00000511439 FATE1Q969F0 183 aa4.64□□□□□ -1.67
TOPBP1-208ENST00000511439 RPL10LQ96L21 214 aaKnown RBP4.64□□□□□ -1.67
TOPBP1-208ENST00000511439 SLC2A13Q96QE2 648 aa4.64□□□□□ -1.67
TOPBP1-208ENST00000511439 TAF1DQ9H5J8 278 aaPredicted RBP4.64□□□□□ -1.67
TOPBP1-208ENST00000511439 IL23AQ9NPF7 189 aa4.64□□□□□ -1.67
TOPBP1-208ENST00000511439 DDX21Q9NR30 783 aaKnown RBP eCLIP4.64□□□□□ -1.67
TOPBP1-208ENST00000511439 SLC2A4RGQ9NR83 387 aa4.64□□□□□ -1.67
TOPBP1-208ENST00000511439 SCOCQ9UIL1 159 aa4.64□□□□□ -1.67
TOPBP1-208ENST00000511439 RCAN3Q9UKA8 241 aa4.64□□□□□ -1.67
TOPBP1-208ENST00000511439 DMRT1Q9Y5R6 373 aa4.64□□□□□ -1.67
TOPBP1-208ENST00000511439 C4BP0C0L5 1744 aa4.63□□□□□ -1.67
TOPBP1-208ENST00000511439 SPTBN5Q9NRC6 3674 aaKnown RBP4.63□□□□□ -1.67
TOPBP1-208ENST00000511439 XPOTO43592 962 aaKnown RBP4.63□□□□□ -1.67
TOPBP1-208ENST00000511439 MFAP3LO75121 409 aa4.63□□□□□ -1.67
TOPBP1-208ENST00000511439 TMEM127O75204 238 aa4.63□□□□□ -1.67
TOPBP1-208ENST00000511439 IPO13O94829 963 aaKnown RBP4.63□□□□□ -1.67
TOPBP1-208ENST00000511439 JUNP05412 331 aaKnown RBP4.63□□□□□ -1.67
TOPBP1-208ENST00000511439 VSIG10L2P0DP72 767 aa4.63□□□□□ -1.67
TOPBP1-208ENST00000511439 IL2RBP14784 551 aa4.63□□□□□ -1.67
TOPBP1-208ENST00000511439 CCND1P24385 295 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms