RNA–Protein interactions for RNA: ENST00000510541.5

CLDND1-221, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-221ENST00000510541 TFF2Q03403 129 aa18.65■□□□□ 0.58
CLDND1-221ENST00000510541 SV2CQ496J9 727 aa18.65■□□□□ 0.58
CLDND1-221ENST00000510541 LIMS2Q7Z4I7 341 aa18.65■□□□□ 0.58
CLDND1-221ENST00000510541 C1orf127Q8N9H9 656 aa18.65■□□□□ 0.58
CLDND1-221ENST00000510541 ZSWIM2Q8NEG5 633 aa18.65■□□□□ 0.58
CLDND1-221ENST00000510541 PARD3BQ8TEW8 1205 aa18.65■□□□□ 0.58
CLDND1-221ENST00000510541 AUTS2Q8WXX7 1259 aa18.65■□□□□ 0.58
CLDND1-221ENST00000510541 DHTKD1Q96HY7 919 aaPredicted RBP18.65■□□□□ 0.58
CLDND1-221ENST00000510541 ANKRD36BP1Q96IX9 119 aa18.65■□□□□ 0.58
CLDND1-221ENST00000510541 CGRRF1Q99675 332 aa18.65■□□□□ 0.58
CLDND1-221ENST00000510541 IGFLR1Q9H665 355 aa18.65■□□□□ 0.58
CLDND1-221ENST00000510541 VRTNQ9H8Y1 702 aa18.65■□□□□ 0.58
CLDND1-221ENST00000510541 PDE11AQ9HCR9 933 aa18.65■□□□□ 0.58
CLDND1-221ENST00000510541 FBXW11Q9UKB1 542 aa18.65■□□□□ 0.58
CLDND1-221ENST00000510541 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.64■□□□□ 0.57
CLDND1-221ENST00000510541 OR6C75A6NL08 312 aa18.64■□□□□ 0.57
CLDND1-221ENST00000510541 TKTP29401 623 aaKnown RBP18.64■□□□□ 0.57
CLDND1-221ENST00000510541 BRCC3P46736 316 aa18.64■□□□□ 0.57
CLDND1-221ENST00000510541 WNT7BP56706 349 aa18.64■□□□□ 0.57
CLDND1-221ENST00000510541 SMARCB1Q12824 385 aa18.64■□□□□ 0.57
CLDND1-221ENST00000510541 VARS2Q5ST30 1063 aaKnown RBP18.64■□□□□ 0.57
CLDND1-221ENST00000510541 PTCRAQ6ISU1 281 aaPredicted RBP18.64■□□□□ 0.57
CLDND1-221ENST00000510541 ZNF280DQ6N043 979 aa18.64■□□□□ 0.57
CLDND1-221ENST00000510541 ADSSL1Q8N142 457 aa18.64■□□□□ 0.57
CLDND1-221ENST00000510541 ZNF461Q8TAF7 563 aa18.64■□□□□ 0.57
CLDND1-221ENST00000510541 HASPINQ8TF76 798 aa18.64■□□□□ 0.57
CLDND1-221ENST00000510541 RABGGTAQ92696 567 aa18.64■□□□□ 0.57
CLDND1-221ENST00000510541 FAM212AQ96EL1 285 aa18.64■□□□□ 0.57
CLDND1-221ENST00000510541 FNBP1Q96RU3 617 aa18.64■□□□□ 0.57
CLDND1-221ENST00000510541 GZF1Q9H116 711 aaPredicted RBP18.64■□□□□ 0.57
CLDND1-221ENST00000510541 KIAA1468Q9P260 1216 aa18.64■□□□□ 0.57
CLDND1-221ENST00000510541 FRMD4BQ9Y2L6 1034 aa18.64■□□□□ 0.57
CLDND1-221ENST00000510541 SCN1AP35498 2009 aa18.63■□□□□ 0.57
CLDND1-221ENST00000510541 GOLGA8IPA6NC78 632 aa18.63■□□□□ 0.57
CLDND1-221ENST00000510541 GOLGA8JA6NMD2 632 aa18.63■□□□□ 0.57
CLDND1-221ENST00000510541 CLIC2O15247 247 aa18.63■□□□□ 0.57
CLDND1-221ENST00000510541 TGM5O43548 720 aa18.63■□□□□ 0.57
CLDND1-221ENST00000510541 HNRNPA1P09651 372 aaKnown RBP eCLIP18.63■□□□□ 0.57
CLDND1-221ENST00000510541 ODC1P11926 461 aa18.63■□□□□ 0.57
CLDND1-221ENST00000510541 IGFBP6P24592 240 aaPredicted RBP18.63■□□□□ 0.57
CLDND1-221ENST00000510541 ATICP31939 592 aa18.63■□□□□ 0.57
CLDND1-221ENST00000510541 PRCPP42785 496 aa18.63■□□□□ 0.57
CLDND1-221ENST00000510541 MTHFRP42898 656 aa18.63■□□□□ 0.57
CLDND1-221ENST00000510541 YWHAHQ04917 246 aaPredicted RBP18.63■□□□□ 0.57
CLDND1-221ENST00000510541 SPAG1Q07617 926 aa18.63■□□□□ 0.57
CLDND1-221ENST00000510541 STIM1Q13586 685 aa18.63■□□□□ 0.57
CLDND1-221ENST00000510541 MORC3Q14149 939 aa18.63■□□□□ 0.57
CLDND1-221ENST00000510541 INTS8Q75QN2 995 aaKnown RBP18.63■□□□□ 0.57
CLDND1-221ENST00000510541 TMEM86AQ8N2M4 240 aa18.63■□□□□ 0.57
CLDND1-221ENST00000510541 FAXDC2Q96IV6 333 aa18.63■□□□□ 0.57
CLDND1-221ENST00000510541 SENP8Q96LD8 212 aa18.63■□□□□ 0.57
CLDND1-221ENST00000510541 POP1Q99575 1024 aaKnown RBP18.63■□□□□ 0.57
CLDND1-221ENST00000510541 LMBRD1Q9NUN5 540 aa18.63■□□□□ 0.57
CLDND1-221ENST00000510541 SIX4Q9UIU6 781 aa18.63■□□□□ 0.57
CLDND1-221ENST00000510541 BARX2Q9UMQ3 279 aaPredicted RBP18.63■□□□□ 0.57
CLDND1-221ENST00000510541 C19orf67A6NJJ6 358 aa18.62■□□□□ 0.57
CLDND1-221ENST00000510541 KPNA7A9QM74 516 aa18.62■□□□□ 0.57
CLDND1-221ENST00000510541 TNNC2P02585 160 aa18.62■□□□□ 0.57
CLDND1-221ENST00000510541 TMEM191BP0C7N4 346 aa18.62■□□□□ 0.57
CLDND1-221ENST00000510541 ATF2P15336 505 aa18.62■□□□□ 0.57
CLDND1-221ENST00000510541 EPCAMP16422 314 aa18.62■□□□□ 0.57
CLDND1-221ENST00000510541 CYP2J2P51589 502 aa18.62■□□□□ 0.57
CLDND1-221ENST00000510541 TFAMQ00059 246 aaKnown RBP18.62■□□□□ 0.57
CLDND1-221ENST00000510541 FKBP3Q00688 224 aaKnown RBP18.62■□□□□ 0.57
CLDND1-221ENST00000510541 CES5AQ6NT32 575 aa18.62■□□□□ 0.57
CLDND1-221ENST00000510541 PRSS55Q6UWB4 352 aaPredicted RBP18.62■□□□□ 0.57
CLDND1-221ENST00000510541 GPR149Q86SP6 731 aa18.62■□□□□ 0.57
CLDND1-221ENST00000510541 CEP57Q86XR8 500 aa18.62■□□□□ 0.57
CLDND1-221ENST00000510541 RIPOR3Q96MK2 946 aa18.62■□□□□ 0.57
CLDND1-221ENST00000510541 GOLGA6L22H0YM25 854 aa18.61■□□□□ 0.57
CLDND1-221ENST00000510541 H3BQ06 376 aaPredicted RBP18.61■□□□□ 0.57
CLDND1-221ENST00000510541 C2CD2LO14523 706 aa18.61■□□□□ 0.57
CLDND1-221ENST00000510541 PSMA7O14818 248 aa18.61■□□□□ 0.57
CLDND1-221ENST00000510541 SPTLC1O15269 473 aa18.61■□□□□ 0.57
CLDND1-221ENST00000510541 NR2F2P24468 414 aa18.61■□□□□ 0.57
CLDND1-221ENST00000510541 CCNE1P24864 410 aa18.61■□□□□ 0.57
CLDND1-221ENST00000510541 GTF2H1P32780 548 aa18.61■□□□□ 0.57
CLDND1-221ENST00000510541 PSMC2P35998 433 aaKnown RBP18.61■□□□□ 0.57
CLDND1-221ENST00000510541 KCNQ1P51787 676 aa18.61■□□□□ 0.57
CLDND1-221ENST00000510541 MYO1EQ12965 1108 aa18.61■□□□□ 0.57
CLDND1-221ENST00000510541 ADAM9Q13443 819 aa18.61■□□□□ 0.57
CLDND1-221ENST00000510541 CBX2Q14781 532 aaPredicted RBP18.61■□□□□ 0.57
CLDND1-221ENST00000510541 CCDC149Q6ZUS6 474 aa18.61■□□□□ 0.57
CLDND1-221ENST00000510541 TRAPPC11Q7Z392 1133 aa18.61■□□□□ 0.57
CLDND1-221ENST00000510541 ADHFE1Q8IWW8 467 aa18.61■□□□□ 0.57
CLDND1-221ENST00000510541 TCEAL8Q8IYN2 117 aa18.61■□□□□ 0.57
CLDND1-221ENST00000510541 TOP6BLQ8N6T0 577 aa18.61■□□□□ 0.57
CLDND1-221ENST00000510541 FBXL5Q9UKA1 691 aa18.61■□□□□ 0.57
CLDND1-221ENST00000510541 MAN1B1Q9UKM7 699 aa18.61■□□□□ 0.57
CLDND1-221ENST00000510541 USTQ9Y2C2 406 aa18.61■□□□□ 0.57
CLDND1-221ENST00000510541 VCANP13611 3396 aa18.61■□□□□ 0.57
CLDND1-221ENST00000510541 BDP1A6H8Y1 2624 aa18.6■□□□□ 0.57
CLDND1-221ENST00000510541 PPEF2O14830 753 aa18.6■□□□□ 0.57
CLDND1-221ENST00000510541 SLC16A3O15427 465 aaKnown RBP18.6■□□□□ 0.57
CLDND1-221ENST00000510541 ZMYND10O75800 440 aa18.6■□□□□ 0.57
CLDND1-221ENST00000510541 ITGB3P05106 788 aa18.6■□□□□ 0.57
CLDND1-221ENST00000510541 OR1D2P34982 312 aa18.6■□□□□ 0.57
CLDND1-221ENST00000510541 CT47A1Q5JQC4 288 aaPredicted RBP18.6■□□□□ 0.57
CLDND1-221ENST00000510541 OVOS1Q6IE37 1185 aa18.6■□□□□ 0.57
CLDND1-221ENST00000510541 DSTYKQ6XUX3 929 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms