RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 FBXL5Q9UKA1 691 aa12.71□□□□□ -0.37
HMGXB3-203ENST00000510472 FBXW11Q9UKB1 542 aa12.71□□□□□ -0.37
HMGXB3-203ENST00000510472 TRAF3IP3Q9Y228 551 aa12.71□□□□□ -0.37
HMGXB3-203ENST00000510472 PCDHA5Q9Y5H7 936 aa12.71□□□□□ -0.37
HMGXB3-203ENST00000510472 TRIP11Q15643 1979 aa12.7□□□□□ -0.38
HMGXB3-203ENST00000510472 PTPRJQ12913 1337 aa12.7□□□□□ -0.38
HMGXB3-203ENST00000510472 H7C4K7 107 aa12.7□□□□□ -0.38
HMGXB3-203ENST00000510472 TNFRSF10AO00220 468 aa12.7□□□□□ -0.38
HMGXB3-203ENST00000510472 ZMYND10O75800 440 aa12.7□□□□□ -0.38
HMGXB3-203ENST00000510472 CYP11A1P05108 521 aa12.7□□□□□ -0.38
HMGXB3-203ENST00000510472 CLDN10P78369 228 aa12.7□□□□□ -0.38
HMGXB3-203ENST00000510472 TFAMQ00059 246 aaKnown RBP12.7□□□□□ -0.38
HMGXB3-203ENST00000510472 CYP24A1Q07973 514 aa12.7□□□□□ -0.38
HMGXB3-203ENST00000510472 PSMD6Q15008 389 aa12.7□□□□□ -0.38
HMGXB3-203ENST00000510472 SURF1Q15526 300 aa12.7□□□□□ -0.38
HMGXB3-203ENST00000510472 NFIL3Q16649 462 aa12.7□□□□□ -0.38
HMGXB3-203ENST00000510472 UVSSAQ2YD98 709 aa12.7□□□□□ -0.38
HMGXB3-203ENST00000510472 COBLL1Q53SF7 1204 aa12.7□□□□□ -0.38
HMGXB3-203ENST00000510472 ATAT1Q5SQI0 421 aa12.7□□□□□ -0.38
HMGXB3-203ENST00000510472 RARS2Q5T160 578 aaKnown RBP12.7□□□□□ -0.38
HMGXB3-203ENST00000510472 CES5AQ6NT32 575 aa12.7□□□□□ -0.38
HMGXB3-203ENST00000510472 TMC5Q6UXY8 1006 aa12.7□□□□□ -0.38
HMGXB3-203ENST00000510472 RTL10Q7L3V2 364 aa12.7□□□□□ -0.38
HMGXB3-203ENST00000510472 GLYCTKQ8IVS8 523 aa12.7□□□□□ -0.38
HMGXB3-203ENST00000510472 RDH13Q8NBN7 331 aa12.7□□□□□ -0.38
HMGXB3-203ENST00000510472 OR5B17Q8NGF7 314 aa12.7□□□□□ -0.38
HMGXB3-203ENST00000510472 ZNF461Q8TAF7 563 aa12.7□□□□□ -0.38
HMGXB3-203ENST00000510472 PLEKHO2Q8TD55 490 aa12.7□□□□□ -0.38
HMGXB3-203ENST00000510472 CACTINQ8WUQ7 758 aaKnown RBP12.7□□□□□ -0.38
HMGXB3-203ENST00000510472 CCDC34Q96HJ3 373 aa12.7□□□□□ -0.38
HMGXB3-203ENST00000510472 SENP8Q96LD8 212 aa12.7□□□□□ -0.38
HMGXB3-203ENST00000510472 NECTIN4Q96NY8 510 aa12.7□□□□□ -0.38
HMGXB3-203ENST00000510472 ZDHHC7Q9NXF8 308 aa12.7□□□□□ -0.38
HMGXB3-203ENST00000510472 CDY1Q9Y6F8 540 aa12.7□□□□□ -0.38
HMGXB3-203ENST00000510472 CCDC195A0A1B0GUA6 201 aa12.69□□□□□ -0.38
HMGXB3-203ENST00000510472 RFPL2O75678 378 aa12.69□□□□□ -0.38
HMGXB3-203ENST00000510472 WEE2P0C1S8 567 aa12.69□□□□□ -0.38
HMGXB3-203ENST00000510472 COL9A1P20849 921 aa12.69□□□□□ -0.38
HMGXB3-203ENST00000510472 HOXA9P31269 272 aa12.69□□□□□ -0.38
HMGXB3-203ENST00000510472 MTHFRP42898 656 aa12.69□□□□□ -0.38
HMGXB3-203ENST00000510472 TAF6P49848 677 aa12.69□□□□□ -0.38
HMGXB3-203ENST00000510472 CYP2J2P51589 502 aa12.69□□□□□ -0.38
HMGXB3-203ENST00000510472 ROR1Q01973 937 aa12.69□□□□□ -0.38
HMGXB3-203ENST00000510472 DUOXA2Q1HG44 320 aa12.69□□□□□ -0.38
HMGXB3-203ENST00000510472 ZCWPW2Q504Y3 356 aa12.69□□□□□ -0.38
HMGXB3-203ENST00000510472 LIMS2Q7Z4I7 341 aa12.69□□□□□ -0.38
HMGXB3-203ENST00000510472 WDR49Q8IV35 697 aa12.69□□□□□ -0.38
HMGXB3-203ENST00000510472 LRRC52Q8N7C0 313 aa12.69□□□□□ -0.38
HMGXB3-203ENST00000510472 ZNF516Q92618 1163 aa12.69□□□□□ -0.38
HMGXB3-203ENST00000510472 KHSRPQ92945 711 aaKnown RBP eCLIP12.69□□□□□ -0.38
HMGXB3-203ENST00000510472 CCDC47Q96A33 483 aaKnown RBP12.69□□□□□ -0.38
HMGXB3-203ENST00000510472 OXCT2Q9BYC2 517 aaPredicted RBP12.69□□□□□ -0.38
HMGXB3-203ENST00000510472 PRKD2Q9BZL6 878 aa12.69□□□□□ -0.38
HMGXB3-203ENST00000510472 MTMR12Q9C0I1 747 aa12.69□□□□□ -0.38
HMGXB3-203ENST00000510472 POMKQ9H5K3 350 aa12.69□□□□□ -0.38
HMGXB3-203ENST00000510472 ITGA11Q9UKX5 1188 aa12.69□□□□□ -0.38
HMGXB3-203ENST00000510472 TIMM13Q9Y5L4 95 aaPredicted RBP12.69□□□□□ -0.38
HMGXB3-203ENST00000510472 CITO14578 2027 aa12.69□□□□□ -0.38
HMGXB3-203ENST00000510472 C5orf42Q9H799 3197 aa12.68□□□□□ -0.38
HMGXB3-203ENST00000510472 WDR27A2RRH5 827 aa12.68□□□□□ -0.38
HMGXB3-203ENST00000510472 KPNA7A9QM74 516 aa12.68□□□□□ -0.38
HMGXB3-203ENST00000510472 KIF20AO95235 890 aa12.68□□□□□ -0.38
HMGXB3-203ENST00000510472 NR3C1P04150 777 aa12.68□□□□□ -0.38
HMGXB3-203ENST00000510472 POU2F2P09086 479 aa12.68□□□□□ -0.38
HMGXB3-203ENST00000510472 HNRNPA1P09651 372 aaKnown RBP eCLIP12.68□□□□□ -0.38
HMGXB3-203ENST00000510472 ATF2P15336 505 aa12.68□□□□□ -0.38
HMGXB3-203ENST00000510472 POLR2BP30876 1174 aaKnown RBP12.68□□□□□ -0.38
HMGXB3-203ENST00000510472 PNPLA4P41247 253 aa12.68□□□□□ -0.38
HMGXB3-203ENST00000510472 CASP4P49662 377 aa12.68□□□□□ -0.38
HMGXB3-203ENST00000510472 UBE2HP62256 183 aa12.68□□□□□ -0.38
HMGXB3-203ENST00000510472 RBP5P82980 135 aa12.68□□□□□ -0.38
HMGXB3-203ENST00000510472 YWHAHQ04917 246 aaPredicted RBP12.68□□□□□ -0.38
HMGXB3-203ENST00000510472 CTXN3Q4LDR2 81 aa12.68□□□□□ -0.38
HMGXB3-203ENST00000510472 TPGS2Q68CL5 300 aa12.68□□□□□ -0.38
HMGXB3-203ENST00000510472 LMBRD2Q68DH5 695 aaPredicted RBP12.68□□□□□ -0.38
HMGXB3-203ENST00000510472 DSTYKQ6XUX3 929 aa12.68□□□□□ -0.38
HMGXB3-203ENST00000510472 CSGALNACT2Q8N6G5 542 aa12.68□□□□□ -0.38
HMGXB3-203ENST00000510472 PARD3BQ8TEW8 1205 aa12.68□□□□□ -0.38
HMGXB3-203ENST00000510472 ERCC4Q92889 916 aaPredicted RBP12.68□□□□□ -0.38
HMGXB3-203ENST00000510472 RIPOR3Q96MK2 946 aa12.68□□□□□ -0.38
HMGXB3-203ENST00000510472 POP1Q99575 1024 aaKnown RBP12.68□□□□□ -0.38
HMGXB3-203ENST00000510472 RTP3Q9BQQ7 232 aa12.68□□□□□ -0.38
HMGXB3-203ENST00000510472 GDAP2Q9NXN4 497 aa12.68□□□□□ -0.38
HMGXB3-203ENST00000510472 MAFFQ9ULX9 164 aa12.68□□□□□ -0.38
HMGXB3-203ENST00000510472 AGAP1Q9UPQ3 857 aa12.68□□□□□ -0.38
HMGXB3-203ENST00000510472 MAPK8IP1Q9UQF2 711 aa12.68□□□□□ -0.38
HMGXB3-203ENST00000510472 TCF20Q9UGU0 1960 aaKnown RBP12.68□□□□□ -0.38
HMGXB3-203ENST00000510472 VWA8A3KMH1 1905 aa12.67□□□□□ -0.38
HMGXB3-203ENST00000510472 ARHGEF37A1IGU5 675 aa12.67□□□□□ -0.38
HMGXB3-203ENST00000510472 OR6C75A6NL08 312 aa12.67□□□□□ -0.38
HMGXB3-203ENST00000510472 CYB561D2O14569 222 aa12.67□□□□□ -0.38
HMGXB3-203ENST00000510472 EXOC3O60645 756 aa12.67□□□□□ -0.38
HMGXB3-203ENST00000510472 SEC24AO95486 1093 aa12.67□□□□□ -0.38
HMGXB3-203ENST00000510472 VNN2O95498 520 aa12.67□□□□□ -0.38
HMGXB3-203ENST00000510472 CST3P01034 146 aaPredicted RBP12.67□□□□□ -0.38
HMGXB3-203ENST00000510472 ITGB3P05106 788 aa12.67□□□□□ -0.38
HMGXB3-203ENST00000510472 PRCPP42785 496 aa12.67□□□□□ -0.38
HMGXB3-203ENST00000510472 ZNF658Q5TYW1 1059 aaPredicted RBP12.67□□□□□ -0.38
HMGXB3-203ENST00000510472 WSCD1Q658N2 575 aa12.67□□□□□ -0.38
HMGXB3-203ENST00000510472 ZNF280DQ6N043 979 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms