RNA–Protein interactions for RNA: ENST00000509774.5

PTPN20-222, Transcript of protein tyrosine phosphatase, non-receptor type 20, human

TSL 1 (best) BASIC

Gene PTPN20, Length 788 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN20-222	ENST00000509774	DCAF4L1	Q3SXM0	396 aa		11.21	□□□□□ -0.61
PTPN20-222	ENST00000509774	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	11.21	□□□□□ -0.61
PTPN20-222	ENST00000509774	NT5DC1	Q5TFE4	455 aa		11.21	□□□□□ -0.61
PTPN20-222	ENST00000509774	ATF7IP2	Q5U623	682 aa		11.21	□□□□□ -0.61
PTPN20-222	ENST00000509774	SLFN12L	Q6IEE8	588 aa		11.21	□□□□□ -0.61
PTPN20-222	ENST00000509774	PHLDB3	Q6NSJ2	640 aa		11.21	□□□□□ -0.61
PTPN20-222	ENST00000509774	TAS1R3	Q7RTX0	852 aa		11.21	□□□□□ -0.61
PTPN20-222	ENST00000509774	MAP4K3	Q8IVH8	894 aa		11.21	□□□□□ -0.61
PTPN20-222	ENST00000509774	GSDMA	Q96QA5	445 aa		11.21	□□□□□ -0.61
PTPN20-222	ENST00000509774	ACCS	Q96QU6	501 aa		11.21	□□□□□ -0.61
PTPN20-222	ENST00000509774	TRIM6	Q9C030	488 aa	Predicted RBP	11.21	□□□□□ -0.61
PTPN20-222	ENST00000509774	PTPRH	Q9HD43	1115 aa		11.21	□□□□□ -0.61
PTPN20-222	ENST00000509774	NGRN	Q9NPE2	291 aa	Known RBP	11.21	□□□□□ -0.61
PTPN20-222	ENST00000509774	KANSL3	Q9P2N6	904 aa		11.21	□□□□□ -0.61
PTPN20-222	ENST00000509774	GIT1	Q9Y2X7	761 aa		11.21	□□□□□ -0.61
PTPN20-222	ENST00000509774	PCDHB2	Q9Y5E7	798 aa		11.21	□□□□□ -0.61
PTPN20-222	ENST00000509774	PCDHGA2	Q9Y5H1	932 aa		11.21	□□□□□ -0.61
PTPN20-222	ENST00000509774	TCHH	Q07283	1943 aa		11.21	□□□□□ -0.62
PTPN20-222	ENST00000509774	ARID2	Q68CP9	1835 aa		11.21	□□□□□ -0.62
PTPN20-222	ENST00000509774	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	11.2	□□□□□ -0.62
PTPN20-222	ENST00000509774	C1QTNF9B	B2RNN3	333 aa		11.2	□□□□□ -0.62
PTPN20-222	ENST00000509774	CLDN3	O15551	220 aa		11.2	□□□□□ -0.62
PTPN20-222	ENST00000509774	LILRB5	O75023	590 aa		11.2	□□□□□ -0.62
PTPN20-222	ENST00000509774	CLASP2	O75122	1294 aa	Known RBP	11.2	□□□□□ -0.62
PTPN20-222	ENST00000509774	GADD45B	O75293	160 aa	Predicted RBP	11.2	□□□□□ -0.62
PTPN20-222	ENST00000509774	LRRN2	O75325	713 aa		11.2	□□□□□ -0.62
PTPN20-222	ENST00000509774	RHOBTB3	O94955	611 aa		11.2	□□□□□ -0.62
PTPN20-222	ENST00000509774	RPN1	P04843	607 aa	Known RBP	11.2	□□□□□ -0.62
PTPN20-222	ENST00000509774	C1QTNF9	P0C862	333 aa		11.2	□□□□□ -0.62
PTPN20-222	ENST00000509774	MCF2	P10911	925 aa		11.2	□□□□□ -0.62
PTPN20-222	ENST00000509774	PROZ	P22891	400 aa		11.2	□□□□□ -0.62
PTPN20-222	ENST00000509774	NMT1	P30419	496 aa	Known RBP	11.2	□□□□□ -0.62
PTPN20-222	ENST00000509774	PLCB3	Q01970	1234 aa		11.2	□□□□□ -0.62
PTPN20-222	ENST00000509774	HSP90AA2P	Q14568	343 aa	Predicted RBP	11.2	□□□□□ -0.62
PTPN20-222	ENST00000509774	TMEM132A	Q24JP5	1023 aa		11.2	□□□□□ -0.62
PTPN20-222	ENST00000509774	FAM26F	Q5R3K3	315 aa		11.2	□□□□□ -0.62
PTPN20-222	ENST00000509774	UBXN11	Q5T124	520 aa		11.2	□□□□□ -0.62
PTPN20-222	ENST00000509774	L1TD1	Q5T7N2	865 aa	Known RBP	11.2	□□□□□ -0.62
PTPN20-222	ENST00000509774	LRSAM1	Q6UWE0	723 aa		11.2	□□□□□ -0.62
PTPN20-222	ENST00000509774	OTOP3	Q7RTS5	596 aa		11.2	□□□□□ -0.62
PTPN20-222	ENST00000509774	ZBTB44	Q8NCP5	570 aa		11.2	□□□□□ -0.62
PTPN20-222	ENST00000509774	SPATA20	Q8TB22	786 aa		11.2	□□□□□ -0.62
PTPN20-222	ENST00000509774	ZNF507	Q8TCN5	953 aa		11.2	□□□□□ -0.62
PTPN20-222	ENST00000509774	RSAD2	Q8WXG1	361 aa		11.2	□□□□□ -0.62
PTPN20-222	ENST00000509774	ZNF775	Q96BV0	537 aa	Predicted RBP	11.2	□□□□□ -0.62
PTPN20-222	ENST00000509774	ACSF2	Q96CM8	615 aa	Predicted RBP	11.2	□□□□□ -0.62
PTPN20-222	ENST00000509774	KIFC3	Q9BVG8	833 aa		11.2	□□□□□ -0.62
PTPN20-222	ENST00000509774	TMEM117	Q9H0C3	514 aa		11.2	□□□□□ -0.62
PTPN20-222	ENST00000509774	PDZD7	Q9H5P4	517 aa		11.2	□□□□□ -0.62
PTPN20-222	ENST00000509774	LMBRD1	Q9NUN5	540 aa		11.2	□□□□□ -0.62
PTPN20-222	ENST00000509774	EXOC1	Q9NV70	894 aa		11.2	□□□□□ -0.62
PTPN20-222	ENST00000509774	RMND1	Q9NWS8	449 aa		11.2	□□□□□ -0.62
PTPN20-222	ENST00000509774	IGSF9	Q9P2J2	1179 aa		11.2	□□□□□ -0.62
PTPN20-222	ENST00000509774	CGN	Q9P2M7	1197 aa	Known RBP	11.2	□□□□□ -0.62
PTPN20-222	ENST00000509774	STYXL1	Q9Y6J8	313 aa		11.2	□□□□□ -0.62
PTPN20-222	ENST00000509774	UBE4B	O95155	1302 aa		11.19	□□□□□ -0.62
PTPN20-222	ENST00000509774	C2orf71	A6NGG8	1288 aa		11.19	□□□□□ -0.62
PTPN20-222	ENST00000509774	TBKBP1	A7MCY6	615 aa		11.19	□□□□□ -0.62
PTPN20-222	ENST00000509774	KIAA0391	O15091	583 aa	Known RBP	11.19	□□□□□ -0.62
PTPN20-222	ENST00000509774	INPPL1	O15357	1258 aa		11.19	□□□□□ -0.62
PTPN20-222	ENST00000509774	B4GALT5	O43286	388 aa		11.19	□□□□□ -0.62
PTPN20-222	ENST00000509774	KLRC4	O43908	158 aa		11.19	□□□□□ -0.62
PTPN20-222	ENST00000509774	GCNT3	O95395	438 aa		11.19	□□□□□ -0.62
PTPN20-222	ENST00000509774	ITGA4	P13612	1032 aa		11.19	□□□□□ -0.62
PTPN20-222	ENST00000509774	LIG1	P18858	919 aa		11.19	□□□□□ -0.62
PTPN20-222	ENST00000509774	PTMS	P20962	102 aa		11.19	□□□□□ -0.62
PTPN20-222	ENST00000509774	MCL1	Q07820	350 aa		11.19	□□□□□ -0.62
PTPN20-222	ENST00000509774	SPEM2	Q0P670	501 aa		11.19	□□□□□ -0.62
PTPN20-222	ENST00000509774	FOXC1	Q12948	553 aa		11.19	□□□□□ -0.62
PTPN20-222	ENST00000509774	MPZL3	Q6UWV2	235 aa		11.19	□□□□□ -0.62
PTPN20-222	ENST00000509774	EPM2AIP1	Q7L775	607 aa	Predicted RBP	11.19	□□□□□ -0.62
PTPN20-222	ENST00000509774	ABI1	Q8IZP0	508 aa		11.19	□□□□□ -0.62
PTPN20-222	ENST00000509774	MRPL43	Q8N983	215 aa	Known RBP	11.19	□□□□□ -0.62
PTPN20-222	ENST00000509774	PJA1	Q8NG27	643 aa		11.19	□□□□□ -0.62
PTPN20-222	ENST00000509774	ATRIP	Q8WXE1	791 aa		11.19	□□□□□ -0.62
PTPN20-222	ENST00000509774	BICD1	Q96G01	975 aa		11.19	□□□□□ -0.62
PTPN20-222	ENST00000509774	CPB2	Q96IY4	423 aa		11.19	□□□□□ -0.62
PTPN20-222	ENST00000509774	TSPAN18	Q96SJ8	248 aa		11.19	□□□□□ -0.62
PTPN20-222	ENST00000509774	TCHP	Q9BT92	498 aa		11.19	□□□□□ -0.62
PTPN20-222	ENST00000509774	TARS2	Q9BW92	718 aa	Known RBP	11.19	□□□□□ -0.62
PTPN20-222	ENST00000509774	MRPL9	Q9BYD2	267 aa	Known RBP	11.19	□□□□□ -0.62
PTPN20-222	ENST00000509774	FOXQ1	Q9C009	403 aa		11.19	□□□□□ -0.62
PTPN20-222	ENST00000509774	BLZF1	Q9H2G9	400 aa		11.19	□□□□□ -0.62
PTPN20-222	ENST00000509774	CWH43	Q9H720	699 aa		11.19	□□□□□ -0.62
PTPN20-222	ENST00000509774	TYW1	Q9NV66	732 aa	Known RBP	11.19	□□□□□ -0.62
PTPN20-222	ENST00000509774	FBXO4	Q9UKT5	387 aa		11.19	□□□□□ -0.62
PTPN20-222	ENST00000509774	IPP	Q9Y573	584 aa		11.19	□□□□□ -0.62
PTPN20-222	ENST00000509774	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	11.19	□□□□□ -0.62
PTPN20-222	ENST00000509774	AKAP13	Q12802	2813 aa		11.19	□□□□□ -0.62
PTPN20-222	ENST00000509774	ITPR1	Q14643	2758 aa		11.19	□□□□□ -0.62
PTPN20-222	ENST00000509774	DMXL2	Q8TDJ6	3036 aa		11.19	□□□□□ -0.62
PTPN20-222	ENST00000509774	UNC79	Q9P2D8	2635 aa		11.19	□□□□□ -0.62
PTPN20-222	ENST00000509774	GREB1	Q4ZG55	1949 aa		11.18	□□□□□ -0.62
PTPN20-222	ENST00000509774	HNRNPDL	O14979	420 aa	Known RBP	11.18	□□□□□ -0.62
PTPN20-222	ENST00000509774	N4BP1	O75113	896 aa	Known RBP	11.18	□□□□□ -0.62
PTPN20-222	ENST00000509774	LDHA	P00338	332 aa	Known RBP	11.18	□□□□□ -0.62
PTPN20-222	ENST00000509774	GART	P22102	1010 aa		11.18	□□□□□ -0.62
PTPN20-222	ENST00000509774	LIG4	P49917	911 aa		11.18	□□□□□ -0.62
PTPN20-222	ENST00000509774	BMT2	Q1RMZ1	405 aa		11.18	□□□□□ -0.62
PTPN20-222	ENST00000509774	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	11.18	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms