RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 MCM4P33991 863 aa17.37■□□□□ 0.37
RAB40C-202ENST00000509637 PRPHP41219 470 aa17.37■□□□□ 0.37
RAB40C-202ENST00000509637 ZRSR1Q15695 479 aaKnown RBP17.37■□□□□ 0.37
RAB40C-202ENST00000509637 KRT79Q5XKE5 535 aa17.37■□□□□ 0.37
RAB40C-202ENST00000509637 SLC39A4Q6P5W5 647 aa17.37■□□□□ 0.37
RAB40C-202ENST00000509637 DNASE1L2Q92874 299 aa17.37■□□□□ 0.37
RAB40C-202ENST00000509637 SMARCD2Q92925 531 aa17.37■□□□□ 0.37
RAB40C-202ENST00000509637 DRC1Q96MC2 740 aa17.37■□□□□ 0.37
RAB40C-202ENST00000509637 PGLYRP2Q96PD5 576 aa17.37■□□□□ 0.37
RAB40C-202ENST00000509637 NELL2Q99435 816 aa17.37■□□□□ 0.37
RAB40C-202ENST00000509637 TRMT61BQ9BVS5 477 aaKnown RBP17.37■□□□□ 0.37
RAB40C-202ENST00000509637 EPC1Q9H2F5 836 aa17.37■□□□□ 0.37
RAB40C-202ENST00000509637 CHRDQ9H2X0 955 aa17.37■□□□□ 0.37
RAB40C-202ENST00000509637 BRD9Q9H8M2 597 aa17.37■□□□□ 0.37
RAB40C-202ENST00000509637 YIPF1Q9Y548 306 aa17.37■□□□□ 0.37
RAB40C-202ENST00000509637 PCDHGA2Q9Y5H1 932 aa17.37■□□□□ 0.37
RAB40C-202ENST00000509637 CD2BP2O95400 341 aaKnown RBP17.36■□□□□ 0.37
RAB40C-202ENST00000509637 CHRNB1P11230 501 aa17.36■□□□□ 0.37
RAB40C-202ENST00000509637 SOX9P48436 509 aa17.36■□□□□ 0.37
RAB40C-202ENST00000509637 ATP2C1P98194 919 aaPredicted RBP17.36■□□□□ 0.37
RAB40C-202ENST00000509637 PUM1Q14671 1186 aaKnown RBP eCLIP17.36■□□□□ 0.37
RAB40C-202ENST00000509637 NOLC1Q14978 699 aaKnown RBP eCLIP17.36■□□□□ 0.37
RAB40C-202ENST00000509637 TMEM119Q4V9L6 283 aa17.36■□□□□ 0.37
RAB40C-202ENST00000509637 SCARA3Q6AZY7 606 aa17.36■□□□□ 0.37
RAB40C-202ENST00000509637 PDZD4Q76G19 769 aaPredicted RBP17.36■□□□□ 0.37
RAB40C-202ENST00000509637 FAM184AQ8NB25 1140 aa17.36■□□□□ 0.37
RAB40C-202ENST00000509637 ZSCAN18Q8TBC5 510 aaPredicted RBP17.36■□□□□ 0.37
RAB40C-202ENST00000509637 ZSCAN31Q96LW9 406 aaPredicted RBP17.36■□□□□ 0.37
RAB40C-202ENST00000509637 FIZ1Q96SL8 496 aa17.36■□□□□ 0.37
RAB40C-202ENST00000509637 IKZF4Q9H2S9 585 aa17.36■□□□□ 0.37
RAB40C-202ENST00000509637 C17orf75Q9HAS0 396 aa17.36■□□□□ 0.37
RAB40C-202ENST00000509637 LMAN1LQ9HAT1 526 aa17.36■□□□□ 0.37
RAB40C-202ENST00000509637 TRPV4Q9HBA0 871 aa17.36■□□□□ 0.37
RAB40C-202ENST00000509637 RBM12Q9NTZ6 932 aaKnown RBP17.36■□□□□ 0.37
RAB40C-202ENST00000509637 SMG5Q9UPR3 1016 aaKnown RBP17.36■□□□□ 0.37
RAB40C-202ENST00000509637 SLC27A5Q9Y2P5 690 aa17.36■□□□□ 0.37
RAB40C-202ENST00000509637 HEPACAM2A8MVW5 462 aa17.35■□□□□ 0.37
RAB40C-202ENST00000509637 ADRB2P07550 413 aa17.35■□□□□ 0.37
RAB40C-202ENST00000509637 PLA2G4BP0C869 781 aa17.35■□□□□ 0.37
RAB40C-202ENST00000509637 PSMC3P17980 439 aa17.35■□□□□ 0.37
RAB40C-202ENST00000509637 MAGEA9P43362 315 aa17.35■□□□□ 0.37
RAB40C-202ENST00000509637 ATXN1P54253 815 aaKnown RBP17.35■□□□□ 0.37
RAB40C-202ENST00000509637 NCKAP1LP55160 1127 aa17.35■□□□□ 0.37
RAB40C-202ENST00000509637 SATB1Q01826 763 aa17.35■□□□□ 0.37
RAB40C-202ENST00000509637 GRIN1Q05586 938 aa17.35■□□□□ 0.37
RAB40C-202ENST00000509637 DUSP4Q13115 394 aa17.35■□□□□ 0.37
RAB40C-202ENST00000509637 GNL2Q13823 731 aaKnown RBP17.35■□□□□ 0.37
RAB40C-202ENST00000509637 ENOX2Q16206 610 aaKnown RBP17.35■□□□□ 0.37
RAB40C-202ENST00000509637 ZNF280DQ6N043 979 aa17.35■□□□□ 0.37
RAB40C-202ENST00000509637 TXNDC11Q6PKC3 985 aa17.35■□□□□ 0.37
RAB40C-202ENST00000509637 ZPBP2Q6X784 338 aa17.35■□□□□ 0.37
RAB40C-202ENST00000509637 DTHD1Q6ZMT9 781 aa17.35■□□□□ 0.37
RAB40C-202ENST00000509637 GAREM2Q75VX8 874 aa17.35■□□□□ 0.37
RAB40C-202ENST00000509637 APBB1IPQ7Z5R6 666 aaPredicted RBP17.35■□□□□ 0.37
RAB40C-202ENST00000509637 ATAD1Q8NBU5 361 aa17.35■□□□□ 0.37
RAB40C-202ENST00000509637 ATRIPQ8WXE1 791 aa17.35■□□□□ 0.37
RAB40C-202ENST00000509637 ZNF512Q96ME7 567 aaPredicted RBP17.35■□□□□ 0.37
RAB40C-202ENST00000509637 TRPV5Q9NQA5 729 aa17.35■□□□□ 0.37
RAB40C-202ENST00000509637 BLOC1S4Q9NUP1 217 aa17.35■□□□□ 0.37
RAB40C-202ENST00000509637 SCN1AP35498 2009 aa17.35■□□□□ 0.37
RAB40C-202ENST00000509637 A0A1W2PRU2 124 aa17.34■□□□□ 0.37
RAB40C-202ENST00000509637 TISP43B9A030 160 aa17.34■□□□□ 0.37
RAB40C-202ENST00000509637 ZNF197O14709 1029 aa17.34■□□□□ 0.37
RAB40C-202ENST00000509637 CCNE1P24864 410 aa17.34■□□□□ 0.37
RAB40C-202ENST00000509637 SRSF5Q13243 272 aaKnown RBP17.34■□□□□ 0.37
RAB40C-202ENST00000509637 LPAL2Q16609 132 aa17.34■□□□□ 0.37
RAB40C-202ENST00000509637 C8orf34Q49A92 452 aa17.34■□□□□ 0.37
RAB40C-202ENST00000509637 CYP4A22Q5TCH4 519 aa17.34■□□□□ 0.37
RAB40C-202ENST00000509637 CENPPQ6IPU0 288 aa17.34■□□□□ 0.37
RAB40C-202ENST00000509637 MAMSTRQ6ZN01 415 aa17.34■□□□□ 0.37
RAB40C-202ENST00000509637 MFSD6LQ8IWD5 586 aa17.34■□□□□ 0.37
RAB40C-202ENST00000509637 FAM3CQ92520 227 aa17.34■□□□□ 0.37
RAB40C-202ENST00000509637 KIF12Q96FN5 646 aa17.34■□□□□ 0.37
RAB40C-202ENST00000509637 SH2B1Q9NRF2 756 aaPredicted RBP17.34■□□□□ 0.37
RAB40C-202ENST00000509637 PIAS3Q9Y6X2 628 aa17.34■□□□□ 0.37
RAB40C-202ENST00000509637 VWA3AA6NCI4 1184 aa17.33■□□□□ 0.36
RAB40C-202ENST00000509637 CLDN3O15551 220 aa17.33■□□□□ 0.36
RAB40C-202ENST00000509637 HRO43593 1189 aa17.33■□□□□ 0.36
RAB40C-202ENST00000509637 CLTAP09496 248 aa17.33■□□□□ 0.36
RAB40C-202ENST00000509637 CPB1P15086 417 aa17.33■□□□□ 0.36
RAB40C-202ENST00000509637 HAUS6Q7Z4H7 955 aa17.33■□□□□ 0.36
RAB40C-202ENST00000509637 APPL2Q8NEU8 664 aa17.33■□□□□ 0.36
RAB40C-202ENST00000509637 OR10T2Q8NGX3 314 aa17.33■□□□□ 0.36
RAB40C-202ENST00000509637 TTC8Q8TAM2 541 aa17.33■□□□□ 0.36
RAB40C-202ENST00000509637 KCNN1Q92952 543 aa17.33■□□□□ 0.36
RAB40C-202ENST00000509637 ZFYVE19Q96K21 471 aa17.33■□□□□ 0.36
RAB40C-202ENST00000509637 NCDNQ9UBB6 729 aa17.33■□□□□ 0.36
RAB40C-202ENST00000509637 DAXXQ9UER7 740 aaPredicted RBP17.33■□□□□ 0.36
RAB40C-202ENST00000509637 STK24Q9Y6E0 443 aa17.33■□□□□ 0.36
RAB40C-202ENST00000509637 MTMR11A4FU01 709 aa17.32■□□□□ 0.36
RAB40C-202ENST00000509637 ANKRD63C9JTQ0 380 aa17.32■□□□□ 0.36
RAB40C-202ENST00000509637 LAD1O00515 517 aa17.32■□□□□ 0.36
RAB40C-202ENST00000509637 YWHAHQ04917 246 aaPredicted RBP17.32■□□□□ 0.36
RAB40C-202ENST00000509637 GPR17Q13304 367 aa17.32■□□□□ 0.36
RAB40C-202ENST00000509637 Q6ZS52 159 aa17.32■□□□□ 0.36
RAB40C-202ENST00000509637 ARID3BQ8IVW6 561 aaPredicted RBP17.32■□□□□ 0.36
RAB40C-202ENST00000509637 IRF7Q92985 503 aa17.32■□□□□ 0.36
RAB40C-202ENST00000509637 REEP2Q9BRK0 252 aa17.32■□□□□ 0.36
RAB40C-202ENST00000509637 TIPINQ9BVW5 301 aa17.32■□□□□ 0.36
RAB40C-202ENST00000509637 RAB34Q9BZG1 259 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms