RNA–Protein interactions for RNA: ENST00000509411.5

FBXO38-215, Transcript of F-box protein 38, human

TSL 3

Gene FBXO38, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FBXO38-215	ENST00000509411	PTGIS	Q16647	500 aa		10.83	□□□□□ -0.68
FBXO38-215	ENST00000509411	SGSM1	Q2NKQ1	1148 aa		10.83	□□□□□ -0.68
FBXO38-215	ENST00000509411	ZNF699	Q32M78	642 aa		10.83	□□□□□ -0.68
FBXO38-215	ENST00000509411	HABP4	Q5JVS0	413 aa	Known RBP	10.83	□□□□□ -0.68
FBXO38-215	ENST00000509411	GLRA4	Q5JXX5	417 aa		10.83	□□□□□ -0.68
FBXO38-215	ENST00000509411	C10orf76	Q5T2E6	689 aa		10.83	□□□□□ -0.68
FBXO38-215	ENST00000509411	PAPD7	Q5XG87	772 aa	Known RBP	10.83	□□□□□ -0.68
FBXO38-215	ENST00000509411	TRAF7	Q6Q0C0	670 aa		10.83	□□□□□ -0.68
FBXO38-215	ENST00000509411	RBBP8NL	Q8NC74	664 aa	Predicted RBP	10.83	□□□□□ -0.68
FBXO38-215	ENST00000509411	WHAMM	Q8TF30	809 aa		10.83	□□□□□ -0.68
FBXO38-215	ENST00000509411	TWNK	Q96RR1	684 aa		10.83	□□□□□ -0.68
FBXO38-215	ENST00000509411	CCDC94	Q9BW85	323 aa	Predicted RBP	10.83	□□□□□ -0.68
FBXO38-215	ENST00000509411	NIF3L1	Q9GZT8	377 aa		10.83	□□□□□ -0.68
FBXO38-215	ENST00000509411	THAP2	Q9H0W7	228 aa		10.83	□□□□□ -0.68
FBXO38-215	ENST00000509411	UNC93B1	Q9H1C4	597 aa		10.83	□□□□□ -0.68
FBXO38-215	ENST00000509411	ISCU	Q9H1K1	167 aa		10.83	□□□□□ -0.68
FBXO38-215	ENST00000509411	SMYD3	Q9H7B4	428 aa		10.83	□□□□□ -0.68
FBXO38-215	ENST00000509411	ERVK-5	Q9HDB9	667 aa		10.83	□□□□□ -0.68
FBXO38-215	ENST00000509411	HMX1	Q9NP08	348 aa	Predicted RBP	10.83	□□□□□ -0.68
FBXO38-215	ENST00000509411	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	10.83	□□□□□ -0.68
FBXO38-215	ENST00000509411	CHORDC1	Q9UHD1	332 aa	Predicted RBP	10.83	□□□□□ -0.68
FBXO38-215	ENST00000509411	ST3GAL5	Q9UNP4	418 aa		10.83	□□□□□ -0.68
FBXO38-215	ENST00000509411	COG5	Q9UP83	839 aa		10.83	□□□□□ -0.68
FBXO38-215	ENST00000509411	AGAP1	Q9UPQ3	857 aa		10.83	□□□□□ -0.68
FBXO38-215	ENST00000509411	IPP	Q9Y573	584 aa		10.83	□□□□□ -0.68
FBXO38-215	ENST00000509411		V9GYY5	206 aa	Predicted RBP	10.83	□□□□□ -0.68
FBXO38-215	ENST00000509411	CTAGE9	A4FU28	777 aa		10.82	□□□□□ -0.68
FBXO38-215	ENST00000509411	ZNF185	O15231	689 aa		10.82	□□□□□ -0.68
FBXO38-215	ENST00000509411	SLU7	O95391	586 aa	Known RBP	10.82	□□□□□ -0.68
FBXO38-215	ENST00000509411	FTL	P02792	175 aa	Predicted RBP	10.82	□□□□□ -0.68
FBXO38-215	ENST00000509411	CYP1A1	P04798	512 aa	Predicted RBP	10.82	□□□□□ -0.68
FBXO38-215	ENST00000509411	TMEM253	P0C7T8	217 aa		10.82	□□□□□ -0.68
FBXO38-215	ENST00000509411	CCDC172	P0C7W6	258 aa		10.82	□□□□□ -0.68
FBXO38-215	ENST00000509411	UNG	P13051	313 aa	Predicted RBP	10.82	□□□□□ -0.68
FBXO38-215	ENST00000509411	CD58	P19256	250 aa		10.82	□□□□□ -0.68
FBXO38-215	ENST00000509411	ABCB4	P21439	1286 aa		10.82	□□□□□ -0.68
FBXO38-215	ENST00000509411	THPO	P40225	353 aa		10.82	□□□□□ -0.68
FBXO38-215	ENST00000509411	SOX4	Q06945	474 aa	Predicted RBP	10.82	□□□□□ -0.68
FBXO38-215	ENST00000509411	PCBP1	Q15365	356 aa	Known RBP eCLIP	10.82	□□□□□ -0.68
FBXO38-215	ENST00000509411	MTFR1	Q15390	333 aa		10.82	□□□□□ -0.68
FBXO38-215	ENST00000509411	KYAT1	Q16773	422 aa		10.82	□□□□□ -0.68
FBXO38-215	ENST00000509411	CLEC16A	Q2KHT3	1053 aa		10.82	□□□□□ -0.68
FBXO38-215	ENST00000509411	XKR4	Q5GH76	650 aa		10.82	□□□□□ -0.68
FBXO38-215	ENST00000509411	LLGL2	Q6P1M3	1020 aa		10.82	□□□□□ -0.68
FBXO38-215	ENST00000509411	TMEM270	Q6UE05	265 aa		10.82	□□□□□ -0.68
FBXO38-215	ENST00000509411	MAMSTR	Q6ZN01	415 aa		10.82	□□□□□ -0.68
FBXO38-215	ENST00000509411	RNF180	Q86T96	592 aa		10.82	□□□□□ -0.68
FBXO38-215	ENST00000509411	VPS36	Q86VN1	386 aa		10.82	□□□□□ -0.68
FBXO38-215	ENST00000509411	CPNE8	Q86YQ8	564 aa		10.82	□□□□□ -0.68
FBXO38-215	ENST00000509411	RNF10	Q8N5U6	811 aa	Known RBP	10.82	□□□□□ -0.68
FBXO38-215	ENST00000509411	SLC43A3	Q8NBI5	491 aa		10.82	□□□□□ -0.68
FBXO38-215	ENST00000509411	PCSK9	Q8NBP7	692 aa	Known RBP	10.82	□□□□□ -0.68
FBXO38-215	ENST00000509411	TFAP2B	Q92481	460 aa		10.82	□□□□□ -0.68
FBXO38-215	ENST00000509411	TLR10	Q9BXR5	811 aa		10.82	□□□□□ -0.68
FBXO38-215	ENST00000509411	BCO2	Q9BYV7	579 aa		10.82	□□□□□ -0.68
FBXO38-215	ENST00000509411	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	10.82	□□□□□ -0.68
FBXO38-215	ENST00000509411	TRPV6	Q9H1D0	765 aa		10.82	□□□□□ -0.68
FBXO38-215	ENST00000509411	OSGEP	Q9NPF4	335 aa		10.82	□□□□□ -0.68
FBXO38-215	ENST00000509411	CISH	Q9NSE2	258 aa		10.82	□□□□□ -0.68
FBXO38-215	ENST00000509411	DPP3	Q9NY33	737 aa		10.82	□□□□□ -0.68
FBXO38-215	ENST00000509411	CNTN3	Q9P232	1028 aa		10.82	□□□□□ -0.68
FBXO38-215	ENST00000509411	NXF1	Q9UBU9	619 aa	Known RBP	10.82	□□□□□ -0.68
FBXO38-215	ENST00000509411	HMGXB4	Q9UGU5	601 aa		10.82	□□□□□ -0.68
FBXO38-215	ENST00000509411	CDC23	Q9UJX2	597 aa		10.82	□□□□□ -0.68
FBXO38-215	ENST00000509411	INTU	Q9ULD6	942 aa		10.82	□□□□□ -0.68
FBXO38-215	ENST00000509411	C2CD2	Q9Y426	696 aa		10.82	□□□□□ -0.68
FBXO38-215	ENST00000509411	SCN1A	P35498	2009 aa		10.81	□□□□□ -0.68
FBXO38-215	ENST00000509411		A0A1W2PQ45	241 aa	Predicted RBP	10.81	□□□□□ -0.68
FBXO38-215	ENST00000509411		A0A1W2PQY0	241 aa		10.81	□□□□□ -0.68
FBXO38-215	ENST00000509411	PDE2A	O00408	941 aa	Predicted RBP	10.81	□□□□□ -0.68
FBXO38-215	ENST00000509411	PTGES	O14684	152 aa		10.81	□□□□□ -0.68
FBXO38-215	ENST00000509411	RTN2	O75298	545 aa		10.81	□□□□□ -0.68
FBXO38-215	ENST00000509411	TACC1	O75410	805 aa		10.81	□□□□□ -0.68
FBXO38-215	ENST00000509411	RPS6KA5	O75582	802 aa		10.81	□□□□□ -0.68
FBXO38-215	ENST00000509411	FTCD	O95954	541 aa		10.81	□□□□□ -0.68
FBXO38-215	ENST00000509411	GHR	P10912	638 aa		10.81	□□□□□ -0.68
FBXO38-215	ENST00000509411	TBXAS1	P24557	533 aa	Predicted RBP	10.81	□□□□□ -0.68
FBXO38-215	ENST00000509411	BRD2	P25440	801 aa	Known RBP	10.81	□□□□□ -0.68
FBXO38-215	ENST00000509411	CD52	P31358	61 aa		10.81	□□□□□ -0.68
FBXO38-215	ENST00000509411	GJA8	P48165	433 aa		10.81	□□□□□ -0.68
FBXO38-215	ENST00000509411	PDE6C	P51160	858 aa		10.81	□□□□□ -0.68
FBXO38-215	ENST00000509411	AFF1	P51825	1210 aa	Known RBP	10.81	□□□□□ -0.68
FBXO38-215	ENST00000509411	NFX1	Q12986	1120 aa	Known RBP	10.81	□□□□□ -0.68
FBXO38-215	ENST00000509411	PTK7	Q13308	1070 aa		10.81	□□□□□ -0.68
FBXO38-215	ENST00000509411	ORC1	Q13415	861 aa		10.81	□□□□□ -0.68
FBXO38-215	ENST00000509411	DSC3	Q14574	896 aa		10.81	□□□□□ -0.68
FBXO38-215	ENST00000509411	LPIN1	Q14693	890 aa		10.81	□□□□□ -0.68
FBXO38-215	ENST00000509411	MBTPS1	Q14703	1052 aa		10.81	□□□□□ -0.68
FBXO38-215	ENST00000509411	PTPRO	Q16827	1216 aa		10.81	□□□□□ -0.68
FBXO38-215	ENST00000509411	ZNF394	Q53GI3	561 aa		10.81	□□□□□ -0.68
FBXO38-215	ENST00000509411	FAM26D	Q5JW98	314 aa		10.81	□□□□□ -0.68
FBXO38-215	ENST00000509411	FBXO47	Q5MNV8	452 aa		10.81	□□□□□ -0.68
FBXO38-215	ENST00000509411	ZNF618	Q5T7W0	954 aa		10.81	□□□□□ -0.68
FBXO38-215	ENST00000509411	LRRC57	Q8N9N7	239 aa		10.81	□□□□□ -0.68
FBXO38-215	ENST00000509411	TPCN2	Q8NHX9	752 aa		10.81	□□□□□ -0.68
FBXO38-215	ENST00000509411	SLC35G2	Q8TBE7	412 aa		10.81	□□□□□ -0.68
FBXO38-215	ENST00000509411	CYFIP2	Q96F07	1278 aa		10.81	□□□□□ -0.68
FBXO38-215	ENST00000509411	FAM81B	Q96LP2	452 aa		10.81	□□□□□ -0.68
FBXO38-215	ENST00000509411	NOX5	Q96PH1	765 aa		10.81	□□□□□ -0.68
FBXO38-215	ENST00000509411	ELOVL4	Q9GZR5	314 aa		10.81	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms