RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 GBP6Q6ZN66 633 aa15.95■□□□□ 0.14
RNF4-213ENST00000509388 SPRED2Q7Z698 418 aa15.95■□□□□ 0.14
RNF4-213ENST00000509388 CEP57Q86XR8 500 aa15.95■□□□□ 0.14
RNF4-213ENST00000509388 C3orf58Q8NDZ4 430 aa15.95■□□□□ 0.14
RNF4-213ENST00000509388 APPL2Q8NEU8 664 aa15.95■□□□□ 0.14
RNF4-213ENST00000509388 MMS19Q96T76 1030 aa15.95■□□□□ 0.14
RNF4-213ENST00000509388 NXF1Q9UBU9 619 aaKnown RBP15.95■□□□□ 0.14
RNF4-213ENST00000509388 LZTS1Q9Y250 596 aa15.95■□□□□ 0.14
RNF4-213ENST00000509388 SNX9Q9Y5X1 595 aa15.95■□□□□ 0.14
RNF4-213ENST00000509388 CITO14578 2027 aa15.94■□□□□ 0.14
RNF4-213ENST00000509388 I3L4J1 428 aa15.94■□□□□ 0.14
RNF4-213ENST00000509388 SOX1O00570 391 aaPredicted RBP15.94■□□□□ 0.14
RNF4-213ENST00000509388 CYB561D2O14569 222 aa15.94■□□□□ 0.14
RNF4-213ENST00000509388 PMM2O15305 246 aa15.94■□□□□ 0.14
RNF4-213ENST00000509388 HUS1O60921 280 aa15.94■□□□□ 0.14
RNF4-213ENST00000509388 VNN1O95497 513 aa15.94■□□□□ 0.14
RNF4-213ENST00000509388 SOD2P04179 222 aa15.94■□□□□ 0.14
RNF4-213ENST00000509388 ODC1P11926 461 aa15.94■□□□□ 0.14
RNF4-213ENST00000509388 PTPROQ16827 1216 aa15.94■□□□□ 0.14
RNF4-213ENST00000509388 USP41Q3LFD5 358 aa15.94■□□□□ 0.14
RNF4-213ENST00000509388 TMC7Q7Z402 723 aa15.94■□□□□ 0.14
RNF4-213ENST00000509388 METTL23Q86XA0 190 aa15.94■□□□□ 0.14
RNF4-213ENST00000509388 VPS52Q8N1B4 723 aa15.94■□□□□ 0.14
RNF4-213ENST00000509388 CXorf38Q8TB03 319 aa15.94■□□□□ 0.14
RNF4-213ENST00000509388 SPPL3Q8TCT6 385 aa15.94■□□□□ 0.14
RNF4-213ENST00000509388 BCL7CQ8WUZ0 217 aaPredicted RBP15.94■□□□□ 0.14
RNF4-213ENST00000509388 POF1BQ8WVV4 589 aa15.94■□□□□ 0.14
RNF4-213ENST00000509388 LRCH3Q96II8 777 aa15.94■□□□□ 0.14
RNF4-213ENST00000509388 SUSD3Q96L08 255 aa15.94■□□□□ 0.14
RNF4-213ENST00000509388 SENP8Q96LD8 212 aa15.94■□□□□ 0.14
RNF4-213ENST00000509388 GPR62Q9BZJ7 368 aa15.94■□□□□ 0.14
RNF4-213ENST00000509388 HSD3B7Q9H2F3 369 aa15.94■□□□□ 0.14
RNF4-213ENST00000509388 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.94■□□□□ 0.14
RNF4-213ENST00000509388 SSX2IPQ9Y2D8 614 aa15.94■□□□□ 0.14
RNF4-213ENST00000509388 LRRC10BA6NIK2 292 aa15.93■□□□□ 0.14
RNF4-213ENST00000509388 SYN3O14994 580 aa15.93■□□□□ 0.14
RNF4-213ENST00000509388 SPTLC1O15269 473 aa15.93■□□□□ 0.14
RNF4-213ENST00000509388 CSPG5O95196 566 aa15.93■□□□□ 0.14
RNF4-213ENST00000509388 STAU1O95793 577 aaKnown RBP15.93■□□□□ 0.14
RNF4-213ENST00000509388 URODP06132 367 aa15.93■□□□□ 0.14
RNF4-213ENST00000509388 IGFBP6P24592 240 aaPredicted RBP15.93■□□□□ 0.14
RNF4-213ENST00000509388 EXOC3L4Q17RC7 722 aa15.93■□□□□ 0.14
RNF4-213ENST00000509388 MIIPQ5JXC2 388 aa15.93■□□□□ 0.14
RNF4-213ENST00000509388 SCARA3Q6AZY7 606 aa15.93■□□□□ 0.14
RNF4-213ENST00000509388 CD300LGQ6UXG3 332 aa15.93■□□□□ 0.14
RNF4-213ENST00000509388 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.93■□□□□ 0.14
RNF4-213ENST00000509388 EHBP1Q8NDI1 1231 aa15.93■□□□□ 0.14
RNF4-213ENST00000509388 PCMTD1Q96MG8 357 aaPredicted RBP15.93■□□□□ 0.14
RNF4-213ENST00000509388 CRACR2AQ9BSW2 395 aa15.93■□□□□ 0.14
RNF4-213ENST00000509388 PI4K2AQ9BTU6 479 aa15.93■□□□□ 0.14
RNF4-213ENST00000509388 TTPALQ9BTX7 342 aa15.93■□□□□ 0.14
RNF4-213ENST00000509388 HERC2P3Q9BVR0 1158 aa15.93■□□□□ 0.14
RNF4-213ENST00000509388 ENTPD7Q9NQZ7 604 aa15.93■□□□□ 0.14
RNF4-213ENST00000509388 TLR9Q9NR96 1032 aa15.93■□□□□ 0.14
RNF4-213ENST00000509388 DSEQ9UL01 958 aa15.93■□□□□ 0.14
RNF4-213ENST00000509388 PCDHB8Q9UN66 801 aa15.93■□□□□ 0.14
RNF4-213ENST00000509388 COQ4Q9Y3A0 265 aa15.93■□□□□ 0.14
RNF4-213ENST00000509388 M0QZQ0 153 aa15.92■□□□□ 0.14
RNF4-213ENST00000509388 GRM6O15303 877 aa15.92■□□□□ 0.14
RNF4-213ENST00000509388 ASS1P00966 412 aaKnown RBP15.92■□□□□ 0.14
RNF4-213ENST00000509388 GLUD2P49448 558 aa15.92■□□□□ 0.14
RNF4-213ENST00000509388 AARSP49588 968 aaKnown RBP eCLIP15.92■□□□□ 0.14
RNF4-213ENST00000509388 NOP14P78316 857 aaKnown RBP15.92■□□□□ 0.14
RNF4-213ENST00000509388 FANCCQ00597 558 aa15.92■□□□□ 0.14
RNF4-213ENST00000509388 PLCB2Q00722 1185 aa15.92■□□□□ 0.14
RNF4-213ENST00000509388 UBXN1Q04323 297 aa15.92■□□□□ 0.14
RNF4-213ENST00000509388 LRMPQ12912 555 aa15.92■□□□□ 0.14
RNF4-213ENST00000509388 PDXDC1Q6P996 788 aa15.92■□□□□ 0.14
RNF4-213ENST00000509388 DPH6Q7L8W6 267 aa15.92■□□□□ 0.14
RNF4-213ENST00000509388 TAS1R1Q7RTX1 841 aa15.92■□□□□ 0.14
RNF4-213ENST00000509388 THEM5Q8N1Q8 247 aa15.92■□□□□ 0.14
RNF4-213ENST00000509388 TOP6BLQ8N6T0 577 aa15.92■□□□□ 0.14
RNF4-213ENST00000509388 GDPD5Q8WTR4 605 aa15.92■□□□□ 0.14
RNF4-213ENST00000509388 RIN2Q8WYP3 895 aaPredicted RBP15.92■□□□□ 0.14
RNF4-213ENST00000509388 SEMA4DQ92854 862 aa15.92■□□□□ 0.14
RNF4-213ENST00000509388 NT5C1BQ96P26 610 aa15.92■□□□□ 0.14
RNF4-213ENST00000509388 TCF25Q9BQ70 676 aa15.92■□□□□ 0.14
RNF4-213ENST00000509388 LMAN2LQ9H0V9 348 aa15.92■□□□□ 0.14
RNF4-213ENST00000509388 XYLT2Q9H1B5 865 aa15.92■□□□□ 0.14
RNF4-213ENST00000509388 VRTNQ9H8Y1 702 aa15.92■□□□□ 0.14
RNF4-213ENST00000509388 NGRNQ9NPE2 291 aaKnown RBP15.92■□□□□ 0.14
RNF4-213ENST00000509388 MRPL17Q9NRX2 175 aaKnown RBP15.92■□□□□ 0.14
RNF4-213ENST00000509388 GDAP2Q9NXN4 497 aa15.92■□□□□ 0.14
RNF4-213ENST00000509388 GCNT4Q9P109 453 aa15.92■□□□□ 0.14
RNF4-213ENST00000509388 RALGAPA2Q2PPJ7 1873 aa15.92■□□□□ 0.14
RNF4-213ENST00000509388 GTPBP10A4D1E9 387 aaKnown RBP15.91■□□□□ 0.14
RNF4-213ENST00000509388 LGALS16A8MUM7 142 aa15.91■□□□□ 0.14
RNF4-213ENST00000509388 H7C4K7 107 aa15.91■□□□□ 0.14
RNF4-213ENST00000509388 RFXAPO00287 272 aa15.91■□□□□ 0.14
RNF4-213ENST00000509388 C2CD2LO14523 706 aa15.91■□□□□ 0.14
RNF4-213ENST00000509388 CXCL14O95715 111 aa15.91■□□□□ 0.14
RNF4-213ENST00000509388 TPM3P06753 285 aa15.91■□□□□ 0.14
RNF4-213ENST00000509388 CTSAP10619 480 aa15.91■□□□□ 0.14
RNF4-213ENST00000509388 TYMPP19971 482 aa15.91■□□□□ 0.14
RNF4-213ENST00000509388 UBASH3AP57075 661 aa15.91■□□□□ 0.14
RNF4-213ENST00000509388 YWHAHQ04917 246 aaPredicted RBP15.91■□□□□ 0.14
RNF4-213ENST00000509388 SMC1AQ14683 1233 aaKnown RBP15.91■□□□□ 0.14
RNF4-213ENST00000509388 SPOPLQ6IQ16 392 aa15.91■□□□□ 0.14
RNF4-213ENST00000509388 PDE12Q6L8Q7 609 aaKnown RBP15.91■□□□□ 0.14
RNF4-213ENST00000509388 TMEM86AQ8N2M4 240 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms