RNA–Protein interactions for RNA: ENST00000508715.5

PTPN20-220, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 586 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-220ENST00000508715 MTCH2Q9Y6C9 303 aa11.15□□□□□ -0.62
PTPN20-220ENST00000508715 MYH10P35580 1976 aa11.14□□□□□ -0.63
PTPN20-220ENST00000508715 ADAM12O43184 909 aa11.14□□□□□ -0.63
PTPN20-220ENST00000508715 TBC1D4O60343 1298 aa11.14□□□□□ -0.63
PTPN20-220ENST00000508715 TADA2AO75478 443 aa11.14□□□□□ -0.63
PTPN20-220ENST00000508715 TNNC2P02585 160 aa11.14□□□□□ -0.63
PTPN20-220ENST00000508715 KRT19P08727 400 aa11.14□□□□□ -0.63
PTPN20-220ENST00000508715 CTSAP10619 480 aa11.14□□□□□ -0.63
PTPN20-220ENST00000508715 ATP1A3P13637 1013 aa11.14□□□□□ -0.63
PTPN20-220ENST00000508715 KRT13P13646 458 aa11.14□□□□□ -0.63
PTPN20-220ENST00000508715 GTF2H1P32780 548 aa11.14□□□□□ -0.63
PTPN20-220ENST00000508715 FMO5P49326 533 aa11.14□□□□□ -0.63
PTPN20-220ENST00000508715 ZNF165P49910 485 aa11.14□□□□□ -0.63
PTPN20-220ENST00000508715 ZNF445P59923 1031 aa11.14□□□□□ -0.63
PTPN20-220ENST00000508715 RBP5P82980 135 aa11.14□□□□□ -0.63
PTPN20-220ENST00000508715 MYL5Q02045 173 aa11.14□□□□□ -0.63
PTPN20-220ENST00000508715 DSG1Q02413 1049 aa11.14□□□□□ -0.63
PTPN20-220ENST00000508715 UBE3AQ05086 875 aa11.14□□□□□ -0.63
PTPN20-220ENST00000508715 KCNH2Q12809 1159 aa11.14□□□□□ -0.63
PTPN20-220ENST00000508715 MRPL58Q14197 206 aaKnown RBP11.14□□□□□ -0.63
PTPN20-220ENST00000508715 PTPN14Q15678 1187 aa11.14□□□□□ -0.63
PTPN20-220ENST00000508715 DCAF17Q5H9S7 520 aaPredicted RBP11.14□□□□□ -0.63
PTPN20-220ENST00000508715 FAM171A1Q5VUB5 890 aa11.14□□□□□ -0.63
PTPN20-220ENST00000508715 SPOPLQ6IQ16 392 aa11.14□□□□□ -0.63
PTPN20-220ENST00000508715 DPY19L2P1Q6NXN4 242 aa11.14□□□□□ -0.63
PTPN20-220ENST00000508715 PRSS55Q6UWB4 352 aaPredicted RBP11.14□□□□□ -0.63
PTPN20-220ENST00000508715 LRSAM1Q6UWE0 723 aa11.14□□□□□ -0.63
PTPN20-220ENST00000508715 RSPO2Q6UXX9 243 aaPredicted RBP11.14□□□□□ -0.63
PTPN20-220ENST00000508715 LRRC52Q8N7C0 313 aa11.14□□□□□ -0.63
PTPN20-220ENST00000508715 LNX1Q8TBB1 728 aaPredicted RBP11.14□□□□□ -0.63
PTPN20-220ENST00000508715 RTP3Q9BQQ7 232 aa11.14□□□□□ -0.63
PTPN20-220ENST00000508715 PI4K2AQ9BTU6 479 aa11.14□□□□□ -0.63
PTPN20-220ENST00000508715 MMRN2Q9H8L6 949 aa11.14□□□□□ -0.63
PTPN20-220ENST00000508715 APOBEC3GQ9HC16 384 aaKnown RBP11.14□□□□□ -0.63
PTPN20-220ENST00000508715 TMEM8AQ9HCN3 771 aa11.14□□□□□ -0.63
PTPN20-220ENST00000508715 TIMM13Q9Y5L4 95 aaPredicted RBP11.14□□□□□ -0.63
PTPN20-220ENST00000508715 EYSQ5T1H1 3165 aa11.14□□□□□ -0.63
PTPN20-220ENST00000508715 NOTCH4Q99466 2003 aa11.13□□□□□ -0.63
PTPN20-220ENST00000508715 C2orf71A6NGG8 1288 aa11.13□□□□□ -0.63
PTPN20-220ENST00000508715 KPNA7A9QM74 516 aa11.13□□□□□ -0.63
PTPN20-220ENST00000508715 KCNJ18B7U540 433 aa11.13□□□□□ -0.63
PTPN20-220ENST00000508715 PMM2O15305 246 aa11.13□□□□□ -0.63
PTPN20-220ENST00000508715 HCRTO43612 131 aa11.13□□□□□ -0.63
PTPN20-220ENST00000508715 STAU1O95793 577 aaKnown RBP11.13□□□□□ -0.63
PTPN20-220ENST00000508715 GNA14O95837 355 aa11.13□□□□□ -0.63
PTPN20-220ENST00000508715 ASS1P00966 412 aaKnown RBP11.13□□□□□ -0.63
PTPN20-220ENST00000508715 RPL17P18621 184 aaKnown RBP11.13□□□□□ -0.63
PTPN20-220ENST00000508715 GTF2F1P35269 517 aaKnown RBP eCLIP11.13□□□□□ -0.63
PTPN20-220ENST00000508715 TAF6P49848 677 aa11.13□□□□□ -0.63
PTPN20-220ENST00000508715 MXI1P50539 228 aa11.13□□□□□ -0.63
PTPN20-220ENST00000508715 AP3M2P53677 418 aa11.13□□□□□ -0.63
PTPN20-220ENST00000508715 KRT17Q04695 432 aa11.13□□□□□ -0.63
PTPN20-220ENST00000508715 NCOA4Q13772 614 aa11.13□□□□□ -0.63
PTPN20-220ENST00000508715 KCNJ12Q14500 433 aa11.13□□□□□ -0.63
PTPN20-220ENST00000508715 SOWAHAQ2M3V2 549 aa11.13□□□□□ -0.63
PTPN20-220ENST00000508715 TCP11X2Q5H9J9 407 aa11.13□□□□□ -0.63
PTPN20-220ENST00000508715 TCERG1LQ5VWI1 586 aa11.13□□□□□ -0.63
PTPN20-220ENST00000508715 PLPP4Q5VZY2 271 aa11.13□□□□□ -0.63
PTPN20-220ENST00000508715 KRT39Q6A163 491 aa11.13□□□□□ -0.63
PTPN20-220ENST00000508715 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.13□□□□□ -0.63
PTPN20-220ENST00000508715 LUZP1Q86V48 1076 aa11.13□□□□□ -0.63
PTPN20-220ENST00000508715 OSTM1Q86WC4 334 aa11.13□□□□□ -0.63
PTPN20-220ENST00000508715 GAS2L3Q86XJ1 694 aa11.13□□□□□ -0.63
PTPN20-220ENST00000508715 MRPL38Q96DV4 380 aaKnown RBP11.13□□□□□ -0.63
PTPN20-220ENST00000508715 HPDLQ96IR7 371 aa11.13□□□□□ -0.63
PTPN20-220ENST00000508715 TCF25Q9BQ70 676 aa11.13□□□□□ -0.63
PTPN20-220ENST00000508715 LMAN2LQ9H0V9 348 aa11.13□□□□□ -0.63
PTPN20-220ENST00000508715 SDCBP2Q9H190 292 aa11.13□□□□□ -0.63
PTPN20-220ENST00000508715 VRTNQ9H8Y1 702 aa11.13□□□□□ -0.63
PTPN20-220ENST00000508715 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.13□□□□□ -0.63
PTPN20-220ENST00000508715 TLR9Q9NR96 1032 aa11.13□□□□□ -0.63
PTPN20-220ENST00000508715 GDAP2Q9NXN4 497 aa11.13□□□□□ -0.63
PTPN20-220ENST00000508715 PCDHB8Q9UN66 801 aa11.13□□□□□ -0.63
PTPN20-220ENST00000508715 L1RE1Q9UN81 338 aa11.13□□□□□ -0.63
PTPN20-220ENST00000508715 POLIQ9UNA4 740 aa11.13□□□□□ -0.63
PTPN20-220ENST00000508715 NUB1Q9Y5A7 615 aa11.13□□□□□ -0.63
PTPN20-220ENST00000508715 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.13□□□□□ -0.63
PTPN20-220ENST00000508715 IRAK3Q9Y616 596 aa11.13□□□□□ -0.63
PTPN20-220ENST00000508715 C2orf16Q68DN1 1984 aa11.13□□□□□ -0.63
PTPN20-220ENST00000508715 PRUNE2Q8WUY3 3088 aa11.12□□□□□ -0.63
PTPN20-220ENST00000508715 SF3B1O75533 1304 aaKnown RBP eCLIP11.12□□□□□ -0.63
PTPN20-220ENST00000508715 GREB1Q4ZG55 1949 aa11.12□□□□□ -0.63
PTPN20-220ENST00000508715 CARNS1A5YM72 827 aa11.12□□□□□ -0.63
PTPN20-220ENST00000508715 LRRC10BA6NIK2 292 aa11.12□□□□□ -0.63
PTPN20-220ENST00000508715 CYB561D2O14569 222 aa11.12□□□□□ -0.63
PTPN20-220ENST00000508715 FGFR1OPO95684 399 aaKnown RBP11.12□□□□□ -0.63
PTPN20-220ENST00000508715 CYP11A1P05108 521 aa11.12□□□□□ -0.63
PTPN20-220ENST00000508715 GLUD2P49448 558 aa11.12□□□□□ -0.63
PTPN20-220ENST00000508715 RBM10P98175 930 aaKnown RBP11.12□□□□□ -0.63
PTPN20-220ENST00000508715 APBA1Q02410 837 aa11.12□□□□□ -0.63
PTPN20-220ENST00000508715 BIRC3Q13489 604 aa11.12□□□□□ -0.63
PTPN20-220ENST00000508715 KCNC3Q14003 757 aa11.12□□□□□ -0.63
PTPN20-220ENST00000508715 KRT31Q15323 416 aa11.12□□□□□ -0.63
PTPN20-220ENST00000508715 TPD52L1Q16890 204 aaPredicted RBP11.12□□□□□ -0.63
PTPN20-220ENST00000508715 USP41Q3LFD5 358 aa11.12□□□□□ -0.63
PTPN20-220ENST00000508715 VARS2Q5ST30 1063 aaKnown RBP11.12□□□□□ -0.63
PTPN20-220ENST00000508715 WSCD1Q658N2 575 aa11.12□□□□□ -0.63
PTPN20-220ENST00000508715 MRPL43Q8N983 215 aaKnown RBP11.12□□□□□ -0.63
PTPN20-220ENST00000508715 VN1R2Q8NFZ6 395 aa11.12□□□□□ -0.63
PTPN20-220ENST00000508715 FEZF2Q8TBJ5 459 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms