RNA–Protein interactions for RNA: ENST00000508559.1

BRCC3P1-201, Transcript of BRCA1/BRCA2-containing complex subunit 3 pseudogene 1, humanhuman

BASIC

Gene BRCC3P1, Length 951 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P1-201ENST00000508559 KCNMA1Q12791 1236 aa11.83□□□□□ -0.52
BRCC3P1-201ENST00000508559 NAB2Q15742 525 aa11.83□□□□□ -0.52
BRCC3P1-201ENST00000508559 UPP1Q16831 310 aa11.83□□□□□ -0.52
BRCC3P1-201ENST00000508559 RRAGAQ7L523 313 aa11.83□□□□□ -0.52
BRCC3P1-201ENST00000508559 ENOSF1Q7L5Y1 443 aa11.83□□□□□ -0.52
BRCC3P1-201ENST00000508559 METTL23Q86XA0 190 aa11.83□□□□□ -0.52
BRCC3P1-201ENST00000508559 COLGALT2Q8IYK4 626 aa11.83□□□□□ -0.52
BRCC3P1-201ENST00000508559 APPL2Q8NEU8 664 aa11.83□□□□□ -0.52
BRCC3P1-201ENST00000508559 HASPINQ8TF76 798 aa11.83□□□□□ -0.52
BRCC3P1-201ENST00000508559 TATDN2Q93075 761 aa11.83□□□□□ -0.52
BRCC3P1-201ENST00000508559 ELMO3Q96BJ8 720 aa11.83□□□□□ -0.52
BRCC3P1-201ENST00000508559 ZNF689Q96CS4 500 aaPredicted RBP11.83□□□□□ -0.52
BRCC3P1-201ENST00000508559 CEP72Q9P209 647 aa11.83□□□□□ -0.52
BRCC3P1-201ENST00000508559 DNAJB4Q9UDY4 337 aa11.83□□□□□ -0.52
BRCC3P1-201ENST00000508559 DNAJC12Q9UKB3 198 aa11.83□□□□□ -0.52
BRCC3P1-201ENST00000508559 LUC7L2Q9Y383 392 aaKnown RBP11.83□□□□□ -0.52
BRCC3P1-201ENST00000508559 DAAM1Q9Y4D1 1078 aa11.83□□□□□ -0.52
BRCC3P1-201ENST00000508559 CEP290O15078 2479 aa11.83□□□□□ -0.52
BRCC3P1-201ENST00000508559 ITIH6Q6UXX5 1313 aa11.83□□□□□ -0.52
BRCC3P1-201ENST00000508559 TRIP11Q15643 1979 aa11.82□□□□□ -0.52
BRCC3P1-201ENST00000508559 NT5C1B-RDH14C9J2C7 533 aa11.82□□□□□ -0.52
BRCC3P1-201ENST00000508559 CYB561D2O14569 222 aa11.82□□□□□ -0.52
BRCC3P1-201ENST00000508559 ODC1P11926 461 aa11.82□□□□□ -0.52
BRCC3P1-201ENST00000508559 KRT5P13647 590 aa11.82□□□□□ -0.52
BRCC3P1-201ENST00000508559 UCHL3P15374 230 aa11.82□□□□□ -0.52
BRCC3P1-201ENST00000508559 CD58P19256 250 aa11.82□□□□□ -0.52
BRCC3P1-201ENST00000508559 PBX1P40424 430 aa11.82□□□□□ -0.52
BRCC3P1-201ENST00000508559 SLC11A1P49279 550 aa11.82□□□□□ -0.52
BRCC3P1-201ENST00000508559 LILRA4P59901 499 aa11.82□□□□□ -0.52
BRCC3P1-201ENST00000508559 APBA1Q02410 837 aa11.82□□□□□ -0.52
BRCC3P1-201ENST00000508559 CUL2Q13617 745 aa11.82□□□□□ -0.52
BRCC3P1-201ENST00000508559 GJB7Q6PEY0 223 aa11.82□□□□□ -0.52
BRCC3P1-201ENST00000508559 KCNT2Q6UVM3 1135 aa11.82□□□□□ -0.52
BRCC3P1-201ENST00000508559 FMNL3Q8IVF7 1028 aa11.82□□□□□ -0.52
BRCC3P1-201ENST00000508559 ARHGEF19Q8IW93 802 aa11.82□□□□□ -0.52
BRCC3P1-201ENST00000508559 TTC39CQ8N584 583 aa11.82□□□□□ -0.52
BRCC3P1-201ENST00000508559 LMO3Q8TAP4 145 aa11.82□□□□□ -0.52
BRCC3P1-201ENST00000508559 TMEM169Q96HH4 297 aa11.82□□□□□ -0.52
BRCC3P1-201ENST00000508559 SENP8Q96LD8 212 aa11.82□□□□□ -0.52
BRCC3P1-201ENST00000508559 GDF15Q99988 308 aa11.82□□□□□ -0.52
BRCC3P1-201ENST00000508559 PAAF1Q9BRP4 392 aa11.82□□□□□ -0.52
BRCC3P1-201ENST00000508559 XYLT2Q9H1B5 865 aa11.82□□□□□ -0.52
BRCC3P1-201ENST00000508559 SNX25Q9H3E2 840 aa11.82□□□□□ -0.52
BRCC3P1-201ENST00000508559 ZNHIT6Q9NWK9 470 aaKnown RBP11.82□□□□□ -0.52
BRCC3P1-201ENST00000508559 MSRAQ9UJ68 235 aa11.82□□□□□ -0.52
BRCC3P1-201ENST00000508559 POLIQ9UNA4 740 aa11.82□□□□□ -0.52
BRCC3P1-201ENST00000508559 PCDHB4Q9Y5E5 795 aa11.82□□□□□ -0.52
BRCC3P1-201ENST00000508559 MRPL42Q9Y6G3 142 aaKnown RBP11.82□□□□□ -0.52
BRCC3P1-201ENST00000508559 ANK1P16157 1881 aa11.82□□□□□ -0.52
BRCC3P1-201ENST00000508559 AKR1B15C9JRZ8 316 aaPredicted RBP11.81□□□□□ -0.52
BRCC3P1-201ENST00000508559 LRRN2O75325 713 aa11.81□□□□□ -0.52
BRCC3P1-201ENST00000508559 KIF4AO95239 1232 aa11.81□□□□□ -0.52
BRCC3P1-201ENST00000508559 STAU1O95793 577 aaKnown RBP11.81□□□□□ -0.52
BRCC3P1-201ENST00000508559 GALTP07902 379 aa11.81□□□□□ -0.52
BRCC3P1-201ENST00000508559 WEE2P0C1S8 567 aa11.81□□□□□ -0.52
BRCC3P1-201ENST00000508559 CCDC172P0C7W6 258 aa11.81□□□□□ -0.52
BRCC3P1-201ENST00000508559 PPM1AP35813 382 aa11.81□□□□□ -0.52
BRCC3P1-201ENST00000508559 PBX3P40426 434 aa11.81□□□□□ -0.52
BRCC3P1-201ENST00000508559 RABGGTBP53611 331 aa11.81□□□□□ -0.52
BRCC3P1-201ENST00000508559 HTRA4P83105 476 aaPredicted RBP11.81□□□□□ -0.52
BRCC3P1-201ENST00000508559 GCNT1Q02742 428 aa11.81□□□□□ -0.52
BRCC3P1-201ENST00000508559 KRT17Q04695 432 aa11.81□□□□□ -0.52
BRCC3P1-201ENST00000508559 ELAVL2Q12926 359 aaKnown RBP11.81□□□□□ -0.52
BRCC3P1-201ENST00000508559 RASIP1Q5U651 963 aa11.81□□□□□ -0.52
BRCC3P1-201ENST00000508559 IQCEQ6IPM2 695 aa11.81□□□□□ -0.52
BRCC3P1-201ENST00000508559 PHLDB3Q6NSJ2 640 aa11.81□□□□□ -0.52
BRCC3P1-201ENST00000508559 CNGA4Q8IV77 575 aa11.81□□□□□ -0.52
BRCC3P1-201ENST00000508559 COLGALT1Q8NBJ5 622 aa11.81□□□□□ -0.52
BRCC3P1-201ENST00000508559 STK33Q9BYT3 514 aa11.81□□□□□ -0.52
BRCC3P1-201ENST00000508559 EDEM3Q9BZQ6 932 aa11.81□□□□□ -0.52
BRCC3P1-201ENST00000508559 NUCKS1Q9H1E3 243 aaKnown RBP11.81□□□□□ -0.52
BRCC3P1-201ENST00000508559 GANQ9H2C0 597 aa11.81□□□□□ -0.52
BRCC3P1-201ENST00000508559 CWH43Q9H720 699 aa11.81□□□□□ -0.52
BRCC3P1-201ENST00000508559 VRTNQ9H8Y1 702 aa11.81□□□□□ -0.52
BRCC3P1-201ENST00000508559 CYP3A43Q9HB55 503 aa11.81□□□□□ -0.52
BRCC3P1-201ENST00000508559 APOBEC3GQ9HC16 384 aaKnown RBP11.81□□□□□ -0.52
BRCC3P1-201ENST00000508559 SIX2Q9NPC8 291 aa11.81□□□□□ -0.52
BRCC3P1-201ENST00000508559 SPG21Q9NZD8 308 aa11.81□□□□□ -0.52
BRCC3P1-201ENST00000508559 IMPACTQ9P2X3 320 aa11.81□□□□□ -0.52
BRCC3P1-201ENST00000508559 HCSTQ9UBK5 93 aa11.81□□□□□ -0.52
BRCC3P1-201ENST00000508559 ADAM28Q9UKQ2 775 aa11.81□□□□□ -0.52
BRCC3P1-201ENST00000508559 DSEQ9UL01 958 aa11.81□□□□□ -0.52
BRCC3P1-201ENST00000508559 RWDD3Q9Y3V2 267 aa11.81□□□□□ -0.52
BRCC3P1-201ENST00000508559 FHOD1Q9Y613 1164 aa11.81□□□□□ -0.52
BRCC3P1-201ENST00000508559 SF3B1O75533 1304 aaKnown RBP eCLIP11.81□□□□□ -0.52
BRCC3P1-201ENST00000508559 MKI67P46013 3256 aaKnown RBP11.8□□□□□ -0.52
BRCC3P1-201ENST00000508559 TDRD15B5MCY1 1934 aaKnown RBP11.8□□□□□ -0.52
BRCC3P1-201ENST00000508559 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.8□□□□□ -0.52
BRCC3P1-201ENST00000508559 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.8□□□□□ -0.52
BRCC3P1-201ENST00000508559 A0A1W2PQJ5 194 aa11.8□□□□□ -0.52
BRCC3P1-201ENST00000508559 GRXCR1A8MXD5 290 aa11.8□□□□□ -0.52
BRCC3P1-201ENST00000508559 I3L4J1 428 aa11.8□□□□□ -0.52
BRCC3P1-201ENST00000508559 NRDCO43847 1150 aa11.8□□□□□ -0.52
BRCC3P1-201ENST00000508559 B4GALT3O60512 393 aa11.8□□□□□ -0.52
BRCC3P1-201ENST00000508559 CASP14P31944 242 aa11.8□□□□□ -0.52
BRCC3P1-201ENST00000508559 CA8P35219 290 aa11.8□□□□□ -0.52
BRCC3P1-201ENST00000508559 CTNNB1P35222 781 aa11.8□□□□□ -0.52
BRCC3P1-201ENST00000508559 KRT9P35527 623 aa11.8□□□□□ -0.52
BRCC3P1-201ENST00000508559 STAT1P42224 750 aa11.8□□□□□ -0.52
BRCC3P1-201ENST00000508559 BRCC3P46736 316 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms