RNA–Protein interactions for RNA: ENST00000508171.5

LIN54-207, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 2,684 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-207ENST00000508171 KRT10P13645 584 aa11.61□□□□□ -0.55
LIN54-207ENST00000508171 NCOA4Q13772 614 aa11.61□□□□□ -0.55
LIN54-207ENST00000508171 CNGA2Q16280 664 aa11.61□□□□□ -0.55
LIN54-207ENST00000508171 ZNF394Q53GI3 561 aa11.61□□□□□ -0.55
LIN54-207ENST00000508171 SLFN12LQ6IEE8 588 aa11.61□□□□□ -0.55
LIN54-207ENST00000508171 PLEKHA7Q6IQ23 1121 aa11.61□□□□□ -0.55
LIN54-207ENST00000508171 MFSD5Q6N075 450 aa11.61□□□□□ -0.55
LIN54-207ENST00000508171 DLK2Q6UY11 383 aa11.61□□□□□ -0.55
LIN54-207ENST00000508171 ARMC9Q7Z3E5 817 aa11.61□□□□□ -0.55
LIN54-207ENST00000508171 ZBTB33Q86T24 672 aa11.61□□□□□ -0.55
LIN54-207ENST00000508171 RHOT1Q8IXI2 618 aa11.61□□□□□ -0.55
LIN54-207ENST00000508171 ANKRD35Q8N283 1001 aa11.61□□□□□ -0.55
LIN54-207ENST00000508171 MGARPQ8TDB4 240 aa11.61□□□□□ -0.55
LIN54-207ENST00000508171 KLRG1Q96E93 195 aa11.61□□□□□ -0.55
LIN54-207ENST00000508171 ROPN1BQ9BZX4 212 aaPredicted RBP11.61□□□□□ -0.55
LIN54-207ENST00000508171 ROPN1Q9HAT0 212 aaPredicted RBP11.61□□□□□ -0.55
LIN54-207ENST00000508171 HOXC10Q9NYD6 342 aa11.61□□□□□ -0.55
LIN54-207ENST00000508171 GSTTP1A0A1W2PQM5 241 aa11.6□□□□□ -0.55
LIN54-207ENST00000508171 STAM2O75886 525 aa11.6□□□□□ -0.55
LIN54-207ENST00000508171 PIGRP01833 764 aa11.6□□□□□ -0.55
LIN54-207ENST00000508171 ATF2P15336 505 aa11.6□□□□□ -0.55
LIN54-207ENST00000508171 TGFB2P61812 414 aa11.6□□□□□ -0.55
LIN54-207ENST00000508171 CAPSQ13938 189 aa11.6□□□□□ -0.55
LIN54-207ENST00000508171 ANKRD20A8PQ5CZ79 823 aa11.6□□□□□ -0.55
LIN54-207ENST00000508171 PHF13Q86YI8 300 aaPredicted RBP11.6□□□□□ -0.55
LIN54-207ENST00000508171 GLIS1Q8NBF1 620 aa11.6□□□□□ -0.55
LIN54-207ENST00000508171 CCT6BQ92526 530 aa11.6□□□□□ -0.55
LIN54-207ENST00000508171 ARHGEF2Q92974 986 aaKnown RBP11.6□□□□□ -0.55
LIN54-207ENST00000508171 FAM212AQ96EL1 285 aa11.6□□□□□ -0.55
LIN54-207ENST00000508171 ELAC2Q9BQ52 826 aaKnown RBP11.6□□□□□ -0.55
LIN54-207ENST00000508171 MLXIPLQ9NP71 852 aa11.6□□□□□ -0.55
LIN54-207ENST00000508171 VIMP08670 466 aaKnown RBP11.6□□□□□ -0.55
LIN54-207ENST00000508171 CCNG2Q16589 344 aa11.6□□□□□ -0.55
LIN54-207ENST00000508171 KAZNQ674X7 775 aa11.6□□□□□ -0.55
LIN54-207ENST00000508171 EEPD1Q7L9B9 569 aa11.6□□□□□ -0.55
LIN54-207ENST00000508171 PIGWQ7Z7B1 504 aa11.6□□□□□ -0.55
LIN54-207ENST00000508171 CROCCP2Q86T23 111 aa11.6□□□□□ -0.55
LIN54-207ENST00000508171 KATNAL2Q8IYT4 538 aa11.6□□□□□ -0.55
LIN54-207ENST00000508171 CYP4X1Q8N118 509 aa11.6□□□□□ -0.55
LIN54-207ENST00000508171 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.6□□□□□ -0.55
LIN54-207ENST00000508171 GRK7Q8WTQ7 553 aa11.6□□□□□ -0.55
LIN54-207ENST00000508171 MAIP1Q8WWC4 291 aa11.6□□□□□ -0.55
LIN54-207ENST00000508171 PRPF31Q8WWY3 499 aaKnown RBP11.6□□□□□ -0.55
LIN54-207ENST00000508171 CGRRF1Q99675 332 aa11.6□□□□□ -0.55
LIN54-207ENST00000508171 TRAIPQ9BWF2 469 aa11.6□□□□□ -0.55
LIN54-207ENST00000508171 NIFKQ9BYG3 293 aaKnown RBP11.6□□□□□ -0.55
LIN54-207ENST00000508171 MRPL47Q9HD33 250 aaKnown RBP11.6□□□□□ -0.55
LIN54-207ENST00000508171 TBK1Q9UHD2 729 aa11.6□□□□□ -0.55
LIN54-207ENST00000508171 CNTN6Q9UQ52 1028 aa11.6□□□□□ -0.55
LIN54-207ENST00000508171 SIP14410 1827 aa11.59□□□□□ -0.55
LIN54-207ENST00000508171 PSTPIP1O43586 416 aa11.59□□□□□ -0.55
LIN54-207ENST00000508171 LDHAP00338 332 aaKnown RBP11.59□□□□□ -0.55
LIN54-207ENST00000508171 CETPP11597 493 aa11.59□□□□□ -0.55
LIN54-207ENST00000508171 ADCY1Q08828 1119 aa11.59□□□□□ -0.55
LIN54-207ENST00000508171 ICE2Q659A1 982 aa11.59□□□□□ -0.55
LIN54-207ENST00000508171 TXNRD3NBQ6F5E7 133 aa11.59□□□□□ -0.55
LIN54-207ENST00000508171 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.59□□□□□ -0.55
LIN54-207ENST00000508171 TAOK1Q7L7X3 1001 aa11.59□□□□□ -0.55
LIN54-207ENST00000508171 CCDC197Q8NCU1 140 aa11.59□□□□□ -0.55
LIN54-207ENST00000508171 FEZF2Q8TBJ5 459 aa11.59□□□□□ -0.55
LIN54-207ENST00000508171 TRPM4Q8TD43 1214 aa11.59□□□□□ -0.55
LIN54-207ENST00000508171 ACSF2Q96CM8 615 aaPredicted RBP11.59□□□□□ -0.55
LIN54-207ENST00000508171 VCPIP1Q96JH7 1222 aa11.59□□□□□ -0.55
LIN54-207ENST00000508171 C9orf72Q96LT7 481 aa11.59□□□□□ -0.55
LIN54-207ENST00000508171 SERPINB12Q96P63 405 aa11.59□□□□□ -0.55
LIN54-207ENST00000508171 TCHPQ9BT92 498 aa11.59□□□□□ -0.55
LIN54-207ENST00000508171 NINJ2Q9NZG7 142 aa11.59□□□□□ -0.55
LIN54-207ENST00000508171 AFG3L2Q9Y4W6 797 aa11.59□□□□□ -0.55
LIN54-207ENST00000508171 IGKV6D-21A0A0A0MT36 114 aa11.59□□□□□ -0.55
LIN54-207ENST00000508171 TMEM120BA0PK00 339 aa11.59□□□□□ -0.55
LIN54-207ENST00000508171 F8VP50 259 aa11.59□□□□□ -0.55
LIN54-207ENST00000508171 MGAMO43451 1857 aa11.59□□□□□ -0.55
LIN54-207ENST00000508171 UBA1P22314 1058 aaKnown RBP11.59□□□□□ -0.55
LIN54-207ENST00000508171 ICAM3P32942 547 aa11.59□□□□□ -0.55
LIN54-207ENST00000508171 ABCD1P33897 745 aa11.59□□□□□ -0.55
LIN54-207ENST00000508171 MAN1A1P33908 653 aa11.59□□□□□ -0.55
LIN54-207ENST00000508171 SCTRP47872 440 aa11.59□□□□□ -0.55
LIN54-207ENST00000508171 ZNF252P-AS1Q0IIN9 211 aa11.59□□□□□ -0.55
LIN54-207ENST00000508171 MPP2Q14168 576 aa11.59□□□□□ -0.55
LIN54-207ENST00000508171 TREML2Q5T2D2 321 aa11.59□□□□□ -0.55
LIN54-207ENST00000508171 ZFYVE27Q5T4F4 411 aa11.59□□□□□ -0.55
LIN54-207ENST00000508171 VSTM1Q6UX27 236 aa11.59□□□□□ -0.55
LIN54-207ENST00000508171 TRIM72Q6ZMU5 477 aa11.59□□□□□ -0.55
LIN54-207ENST00000508171 SYDE1Q6ZW31 735 aaPredicted RBP11.59□□□□□ -0.55
LIN54-207ENST00000508171 ZNF365Q70YC5 407 aa11.59□□□□□ -0.55
LIN54-207ENST00000508171 FHDC1Q9C0D6 1143 aaPredicted RBP11.59□□□□□ -0.55
LIN54-207ENST00000508171 STMN4Q9H169 189 aaPredicted RBP11.59□□□□□ -0.55
LIN54-207ENST00000508171 R3HDMLQ9H3Y0 253 aa11.59□□□□□ -0.55
LIN54-207ENST00000508171 PARVAQ9NVD7 372 aa11.59□□□□□ -0.55
LIN54-207ENST00000508171 KCNG1Q9UIX4 513 aa11.59□□□□□ -0.55
LIN54-207ENST00000508171 ASAP2O43150 1006 aa11.58□□□□□ -0.56
LIN54-207ENST00000508171 ADCY3O60266 1144 aa11.58□□□□□ -0.56
LIN54-207ENST00000508171 FARP2O94887 1054 aaPredicted RBP11.58□□□□□ -0.56
LIN54-207ENST00000508171 GH1P01241 217 aa11.58□□□□□ -0.56
LIN54-207ENST00000508171 ZSCAN5DPP0CG00 497 aa11.58□□□□□ -0.56
LIN54-207ENST00000508171 SRGAP2CP0DJJ0 459 aa11.58□□□□□ -0.56
LIN54-207ENST00000508171 ETS1P14921 441 aa11.58□□□□□ -0.56
LIN54-207ENST00000508171 MMP8P22894 467 aa11.58□□□□□ -0.56
LIN54-207ENST00000508171 TBXAS1P24557 533 aaPredicted RBP11.58□□□□□ -0.56
LIN54-207ENST00000508171 ALDH5A1P51649 535 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms