RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 ADCY2Q08462 1091 aa15.43■□□□□ 0.06
DDX41-208ENST00000507955 PLCB4Q15147 1175 aa15.43■□□□□ 0.06
DDX41-208ENST00000507955 MDM1Q8TC05 714 aa15.43■□□□□ 0.06
DDX41-208ENST00000507955 OPTNQ96CV9 577 aa15.43■□□□□ 0.06
DDX41-208ENST00000507955 ACO2Q99798 780 aaKnown RBP15.43■□□□□ 0.06
DDX41-208ENST00000507955 INO80BQ9C086 356 aaPredicted RBP15.43■□□□□ 0.06
DDX41-208ENST00000507955 CAPN7Q9Y6W3 813 aa15.43■□□□□ 0.06
DDX41-208ENST00000507955 ATXN2Q99700 1313 aaKnown RBP15.43■□□□□ 0.06
DDX41-208ENST00000507955 FAM187AA6NFU0 413 aa15.43■□□□□ 0.06
DDX41-208ENST00000507955 FAM107AO95990 144 aa15.43■□□□□ 0.06
DDX41-208ENST00000507955 LDHAP00338 332 aaKnown RBP15.43■□□□□ 0.06
DDX41-208ENST00000507955 PRKCBP05771 671 aa15.43■□□□□ 0.06
DDX41-208ENST00000507955 HNRNPH1P31943 449 aaKnown RBP15.43■□□□□ 0.06
DDX41-208ENST00000507955 RAP1GAPP47736 663 aa15.43■□□□□ 0.06
DDX41-208ENST00000507955 PPP1R7Q15435 360 aa15.43■□□□□ 0.06
DDX41-208ENST00000507955 QPCTQ16769 361 aa15.43■□□□□ 0.06
DDX41-208ENST00000507955 CELF3Q5SZQ8 465 aaKnown RBP15.43■□□□□ 0.06
DDX41-208ENST00000507955 DHX37Q8IY37 1157 aaKnown RBP15.43■□□□□ 0.06
DDX41-208ENST00000507955 DDX27Q96GQ7 796 aaKnown RBP15.43■□□□□ 0.06
DDX41-208ENST00000507955 EVPLQ92817 2033 aa15.42■□□□□ 0.06
DDX41-208ENST00000507955 TP73O15350 636 aa15.42■□□□□ 0.06
DDX41-208ENST00000507955 TOM1L1O75674 476 aa15.42■□□□□ 0.06
DDX41-208ENST00000507955 TXNP10599 105 aaKnown RBP15.42■□□□□ 0.06
DDX41-208ENST00000507955 RALAP11233 206 aa15.42■□□□□ 0.06
DDX41-208ENST00000507955 TMEM132AQ24JP5 1023 aa15.42■□□□□ 0.06
DDX41-208ENST00000507955 ERO1BQ86YB8 467 aa15.42■□□□□ 0.06
DDX41-208ENST00000507955 OTUD6BQ8N6M0 293 aa15.42■□□□□ 0.06
DDX41-208ENST00000507955 CDCA5Q96FF9 252 aa15.42■□□□□ 0.06
DDX41-208ENST00000507955 CCDC113Q9H0I3 377 aa15.42■□□□□ 0.06
DDX41-208ENST00000507955 TMEM134Q9H6X4 195 aa15.42■□□□□ 0.06
DDX41-208ENST00000507955 NXF1Q9UBU9 619 aaKnown RBP15.42■□□□□ 0.06
DDX41-208ENST00000507955 RASAL2Q9UJF2 1139 aa15.42■□□□□ 0.06
DDX41-208ENST00000507955 MTUS1Q9ULD2 1270 aa15.42■□□□□ 0.06
DDX41-208ENST00000507955 TLR3O15455 904 aaKnown RBP15.42■□□□□ 0.06
DDX41-208ENST00000507955 ITGBL1O95965 494 aaPredicted RBP15.42■□□□□ 0.06
DDX41-208ENST00000507955 PSMC4P43686 418 aa15.42■□□□□ 0.06
DDX41-208ENST00000507955 KRT17Q04695 432 aa15.42■□□□□ 0.06
DDX41-208ENST00000507955 SF3A3Q12874 501 aaKnown RBP eCLIP15.42■□□□□ 0.063e-6■■■■□ 20.8
DDX41-208ENST00000507955 MOGSQ13724 837 aa15.42■□□□□ 0.06
DDX41-208ENST00000507955 TFAP2BQ92481 460 aa15.42■□□□□ 0.06
DDX41-208ENST00000507955 MMP19Q99542 508 aa15.42■□□□□ 0.06
DDX41-208ENST00000507955 MRPL4Q9BYD3 311 aaKnown RBP15.42■□□□□ 0.06
DDX41-208ENST00000507955 TJP2Q9UDY2 1190 aa15.42■□□□□ 0.06
DDX41-208ENST00000507955 POLIQ9UNA4 740 aa15.42■□□□□ 0.06
DDX41-208ENST00000507955 FOXO6A8MYZ6 492 aa15.41■□□□□ 0.06
DDX41-208ENST00000507955 ABLIM1O14639 778 aa15.41■□□□□ 0.06
DDX41-208ENST00000507955 TGFB3P10600 412 aa15.41■□□□□ 0.06
DDX41-208ENST00000507955 KRT10P13645 584 aa15.41■□□□□ 0.06
DDX41-208ENST00000507955 CDH8P55286 799 aa15.41■□□□□ 0.06
DDX41-208ENST00000507955 PTP4A2Q12974 167 aa15.41■□□□□ 0.06
DDX41-208ENST00000507955 KCTD2Q14681 263 aa15.41■□□□□ 0.06
DDX41-208ENST00000507955 MAPK6Q16659 721 aa15.41■□□□□ 0.06
DDX41-208ENST00000507955 SPRED3Q2MJR0 410 aa15.41■□□□□ 0.06
DDX41-208ENST00000507955 CYP4A22Q5TCH4 519 aa15.41■□□□□ 0.06
DDX41-208ENST00000507955 TXNRD3NBQ6F5E7 133 aa15.41■□□□□ 0.06
DDX41-208ENST00000507955 EFCAB12Q6NXP0 572 aa15.41■□□□□ 0.06
DDX41-208ENST00000507955 C6orf89Q6UWU4 347 aa15.41■□□□□ 0.06
DDX41-208ENST00000507955 BRSK2Q8IWQ3 736 aa15.41■□□□□ 0.06
DDX41-208ENST00000507955 MORC4Q8TE76 937 aa15.41■□□□□ 0.06
DDX41-208ENST00000507955 LOC285556D6RIA3 1793 aa15.41■□□□□ 0.06
DDX41-208ENST00000507955 FSCN2O14926 492 aa15.41■□□□□ 0.06
DDX41-208ENST00000507955 ASS1P00966 412 aaKnown RBP15.41■□□□□ 0.06
DDX41-208ENST00000507955 KRT19P08727 400 aa15.41■□□□□ 0.06
DDX41-208ENST00000507955 GJA5P36382 358 aa15.41■□□□□ 0.06
DDX41-208ENST00000507955 IFT88Q13099 833 aa15.41■□□□□ 0.06
DDX41-208ENST00000507955 MTMR3Q13615 1198 aa15.41■□□□□ 0.06
DDX41-208ENST00000507955 CYP1B1Q16678 543 aa15.41■□□□□ 0.06
DDX41-208ENST00000507955 FAM182AQ5T1J6 154 aa15.41■□□□□ 0.06
DDX41-208ENST00000507955 ZFYVE27Q5T4F4 411 aa15.41■□□□□ 0.06
DDX41-208ENST00000507955 KAZNQ674X7 775 aa15.41■□□□□ 0.06
DDX41-208ENST00000507955 ANKRD13AQ8IZ07 590 aa15.41■□□□□ 0.06
DDX41-208ENST00000507955 CNPY4Q8N129 248 aa15.41■□□□□ 0.06
DDX41-208ENST00000507955 DDX23Q9BUQ8 820 aaKnown RBP15.41■□□□□ 0.06
DDX41-208ENST00000507955 CISHQ9NSE2 258 aa15.41■□□□□ 0.06
DDX41-208ENST00000507955 AGTPBP1Q9UPW5 1226 aa15.41■□□□□ 0.06
DDX41-208ENST00000507955 TRAPPC3O43617 180 aa15.4■□□□□ 0.06
DDX41-208ENST00000507955 KIAA0754O94854 1291 aa15.4■□□□□ 0.06
DDX41-208ENST00000507955 FSBPO95073 299 aa15.4■□□□□ 0.06
DDX41-208ENST00000507955 ECEL1O95672 775 aa15.4■□□□□ 0.06
DDX41-208ENST00000507955 CXCL8P10145 99 aa15.4■□□□□ 0.06
DDX41-208ENST00000507955 CHKAP35790 457 aa15.4■□□□□ 0.06
DDX41-208ENST00000507955 BPIFB4P59827 614 aa15.4■□□□□ 0.06
DDX41-208ENST00000507955 IFI35P80217 286 aaPredicted RBP15.4■□□□□ 0.06
DDX41-208ENST00000507955 IER5Q5VY09 327 aa15.4■□□□□ 0.06
DDX41-208ENST00000507955 SUGP1Q8IWZ8 645 aaKnown RBP15.4■□□□□ 0.06
DDX41-208ENST00000507955 EPS8L3Q8TE67 593 aaKnown RBP15.4■□□□□ 0.06
DDX41-208ENST00000507955 CCDC114Q96M63 670 aa15.4■□□□□ 0.06
DDX41-208ENST00000507955 PABPC3Q9H361 631 aaKnown RBP15.4■□□□□ 0.06
DDX41-208ENST00000507955 SBF1O95248 1867 aa15.4■□□□□ 0.06
DDX41-208ENST00000507955 F8VP50 259 aa15.4■□□□□ 0.06
DDX41-208ENST00000507955 PROSCO94903 275 aa15.4■□□□□ 0.06
DDX41-208ENST00000507955 PPP2R5EQ16537 467 aa15.4■□□□□ 0.06
DDX41-208ENST00000507955 ZNF568Q3ZCX4 644 aa15.4■□□□□ 0.06
DDX41-208ENST00000507955 ZNF677Q86XU0 584 aa15.4■□□□□ 0.06
DDX41-208ENST00000507955 IMPG2Q9BZV3 1241 aa15.4■□□□□ 0.06
DDX41-208ENST00000507955 AVENQ9NQS1 362 aaPredicted RBP15.4■□□□□ 0.06
DDX41-208ENST00000507955 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.4■□□□□ 0.06
DDX41-208ENST00000507955 ASIC3Q9UHC3 531 aa15.4■□□□□ 0.06
DDX41-208ENST00000507955 CPSF3Q9UKF6 684 aaKnown RBP15.4■□□□□ 0.06
DDX41-208ENST00000507955 SPDYE5A6NIY4 337 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms