RNA–Protein interactions for RNA: ENST00000507533.1

DDR1-260, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-260ENST00000507533 A0A1W2PRU2 124 aa15.25■□□□□ 0.03
DDR1-260ENST00000507533 PODXLO00592 558 aa15.25■□□□□ 0.03
DDR1-260ENST00000507533 DPYSL4O14531 572 aa15.25■□□□□ 0.03
DDR1-260ENST00000507533 EDN1P05305 212 aa15.25■□□□□ 0.03
DDR1-260ENST00000507533 SOX4Q06945 474 aaPredicted RBP15.25■□□□□ 0.03
DDR1-260ENST00000507533 ARID3BQ8IVW6 561 aaPredicted RBP15.25■□□□□ 0.03
DDR1-260ENST00000507533 MCPH1Q8NEM0 835 aa15.25■□□□□ 0.03
DDR1-260ENST00000507533 LRRC3BQ96PB8 259 aa15.25■□□□□ 0.03
DDR1-260ENST00000507533 DUSP15Q9H1R2 295 aaPredicted RBP15.25■□□□□ 0.03
DDR1-260ENST00000507533 NBEAQ8NFP9 2946 aa15.24■□□□□ 0.03
DDR1-260ENST00000507533 WDFY3Q8IZQ1 3526 aa15.24■□□□□ 0.03
DDR1-260ENST00000507533 CPLX1O14810 134 aa15.24■□□□□ 0.03
DDR1-260ENST00000507533 ATG13O75143 517 aa15.24■□□□□ 0.03
DDR1-260ENST00000507533 CAVIN2O95810 425 aa15.24■□□□□ 0.03
DDR1-260ENST00000507533 CEACAM1P13688 526 aa15.24■□□□□ 0.03
DDR1-260ENST00000507533 ATP2B1P20020 1258 aa15.24■□□□□ 0.03
DDR1-260ENST00000507533 EVCP57679 992 aa15.24■□□□□ 0.03
DDR1-260ENST00000507533 CREB5Q02930 508 aa15.24■□□□□ 0.03
DDR1-260ENST00000507533 ELF2Q15723 593 aa15.24■□□□□ 0.03
DDR1-260ENST00000507533 STXBP5Q5T5C0 1151 aa15.24■□□□□ 0.03
DDR1-260ENST00000507533 RNF19BQ6ZMZ0 732 aa15.24■□□□□ 0.03
DDR1-260ENST00000507533 PIK3AP1Q6ZUJ8 805 aa15.24■□□□□ 0.03
DDR1-260ENST00000507533 KCNB2Q92953 911 aa15.24■□□□□ 0.03
DDR1-260ENST00000507533 TMEM209Q96SK2 561 aa15.24■□□□□ 0.03
DDR1-260ENST00000507533 LRRC3Q9BY71 257 aa15.24■□□□□ 0.03
DDR1-260ENST00000507533 CCDC113Q9H0I3 377 aa15.24■□□□□ 0.03
DDR1-260ENST00000507533 PCDHA12Q9UN75 941 aa15.24■□□□□ 0.03
DDR1-260ENST00000507533 NUB1Q9Y5A7 615 aa15.24■□□□□ 0.03
DDR1-260ENST00000507533 DSPP15924 2871 aaKnown RBP15.24■□□□□ 0.03
DDR1-260ENST00000507533 AKAP13Q12802 2813 aa15.23■□□□□ 0.03
DDR1-260ENST00000507533 RHOBTB1O94844 696 aa15.23■□□□□ 0.03
DDR1-260ENST00000507533 XRCC6P12956 609 aaKnown RBP eCLIP15.23■□□□□ 0.03
DDR1-260ENST00000507533 CPB1P15086 417 aa15.23■□□□□ 0.03
DDR1-260ENST00000507533 TNK2Q07912 1038 aa15.23■□□□□ 0.03
DDR1-260ENST00000507533 ZNF280DQ6N043 979 aa15.23■□□□□ 0.03
DDR1-260ENST00000507533 TMC8Q8IU68 726 aa15.23■□□□□ 0.03
DDR1-260ENST00000507533 CAMKK1Q8N5S9 505 aa15.23■□□□□ 0.03
DDR1-260ENST00000507533 DEPTORQ8TB45 409 aa15.23■□□□□ 0.03
DDR1-260ENST00000507533 BSNDQ8WZ55 320 aa15.23■□□□□ 0.03
DDR1-260ENST00000507533 SLC38A7Q9NVC3 462 aa15.23■□□□□ 0.03
DDR1-260ENST00000507533 YIPF1Q9Y548 306 aa15.23■□□□□ 0.03
DDR1-260ENST00000507533 SNX14Q9Y5W7 946 aa15.23■□□□□ 0.03
DDR1-260ENST00000507533 BCLAF3A2AJT9 711 aaKnown RBP15.22■□□□□ 0.03
DDR1-260ENST00000507533 TAF4O00268 1085 aa15.22■□□□□ 0.03
DDR1-260ENST00000507533 CSRP1P21291 193 aaKnown RBP15.22■□□□□ 0.03
DDR1-260ENST00000507533 YARSP54577 528 aaKnown RBP15.22■□□□□ 0.03
DDR1-260ENST00000507533 PLCB2Q00722 1185 aa15.22■□□□□ 0.03
DDR1-260ENST00000507533 ITPRIPL2Q3MIP1 535 aa15.22■□□□□ 0.03
DDR1-260ENST00000507533 NT5DC1Q5TFE4 455 aa15.22■□□□□ 0.03
DDR1-260ENST00000507533 ATF7IP2Q5U623 682 aa15.22■□□□□ 0.03
DDR1-260ENST00000507533 APBB1IPQ7Z5R6 666 aaPredicted RBP15.22■□□□□ 0.03
DDR1-260ENST00000507533 OXER1Q8TDS5 423 aa15.22■□□□□ 0.03
DDR1-260ENST00000507533 TMEM9BQ9NQ34 198 aa15.22■□□□□ 0.03
DDR1-260ENST00000507533 POLR3BQ9NW08 1133 aaPredicted RBP15.22■□□□□ 0.03
DDR1-260ENST00000507533 OBP2AQ9NY56 170 aa15.22■□□□□ 0.03
DDR1-260ENST00000507533 DAXXQ9UER7 740 aaPredicted RBP15.22■□□□□ 0.03
DDR1-260ENST00000507533 DMXL2Q8TDJ6 3036 aa15.21■□□□□ 0.03
DDR1-260ENST00000507533 LNP1A1A4G5 178 aa15.21■□□□□ 0.03
DDR1-260ENST00000507533 DCLK1O15075 740 aa15.21■□□□□ 0.03
DDR1-260ENST00000507533 RPL9P32969 192 aaKnown RBP15.21■□□□□ 0.03
DDR1-260ENST00000507533 NAMPTP43490 491 aa15.21■□□□□ 0.03
DDR1-260ENST00000507533 EPHB3P54753 998 aa15.21■□□□□ 0.03
DDR1-260ENST00000507533 CACNB1Q02641 598 aaPredicted RBP15.21■□□□□ 0.03
DDR1-260ENST00000507533 GRSF1Q12849 480 aaKnown RBP eCLIP15.21■□□□□ 0.03
DDR1-260ENST00000507533 PLD1Q13393 1074 aa15.21■□□□□ 0.03
DDR1-260ENST00000507533 PTPAQ15257 358 aa15.21■□□□□ 0.03
DDR1-260ENST00000507533 XKR4Q5GH76 650 aa15.21■□□□□ 0.03
DDR1-260ENST00000507533 TMEM196Q5HYL7 178 aa15.21■□□□□ 0.03
DDR1-260ENST00000507533 EARS2Q5JPH6 523 aaKnown RBP15.21■□□□□ 0.03
DDR1-260ENST00000507533 FSTL4Q6MZW2 842 aa15.21■□□□□ 0.03
DDR1-260ENST00000507533 KIAA1211LQ6NV74 962 aa15.21■□□□□ 0.03
DDR1-260ENST00000507533 ALKAL1Q6UXT8 129 aa15.21■□□□□ 0.03
DDR1-260ENST00000507533 APPL2Q8NEU8 664 aa15.21■□□□□ 0.03
DDR1-260ENST00000507533 BPIFB1Q8TDL5 484 aa15.21■□□□□ 0.03
DDR1-260ENST00000507533 DDX12PQ92771 950 aa15.21■□□□□ 0.03
DDR1-260ENST00000507533 SUSD3Q96L08 255 aa15.21■□□□□ 0.03
DDR1-260ENST00000507533 ZMAT2Q96NC0 199 aaKnown RBP15.21■□□□□ 0.03
DDR1-260ENST00000507533 HHIPQ96QV1 700 aa15.21■□□□□ 0.03
DDR1-260ENST00000507533 MKNK1Q9BUB5 465 aa15.21■□□□□ 0.03
DDR1-260ENST00000507533 TTC12Q9H892 705 aaPredicted RBP15.21■□□□□ 0.03
DDR1-260ENST00000507533 TOPORSQ9NS56 1045 aaPredicted RBP15.21■□□□□ 0.03
DDR1-260ENST00000507533 TPCN1Q9ULQ1 816 aa15.21■□□□□ 0.03
DDR1-260ENST00000507533 MARCKSP29966 332 aaPredicted RBP15.2■□□□□ 0.02
DDR1-260ENST00000507533 MCM4P33991 863 aa15.2■□□□□ 0.02
DDR1-260ENST00000507533 GRM5P41594 1212 aa15.2■□□□□ 0.02
DDR1-260ENST00000507533 OSTNP61366 133 aa15.2■□□□□ 0.02
DDR1-260ENST00000507533 KARSQ15046 597 aaKnown RBP15.2■□□□□ 0.02
DDR1-260ENST00000507533 CALCRLQ16602 461 aa15.2■□□□□ 0.02
DDR1-260ENST00000507533 GPR158Q5T848 1215 aa15.2■□□□□ 0.02
DDR1-260ENST00000507533 CPLX2Q6PUV4 134 aaKnown RBP15.2■□□□□ 0.02
DDR1-260ENST00000507533 CEP120Q8N960 986 aa15.2■□□□□ 0.02
DDR1-260ENST00000507533 BEST2Q8NFU1 509 aa15.2■□□□□ 0.02
DDR1-260ENST00000507533 KIF12Q96FN5 646 aa15.2■□□□□ 0.02
DDR1-260ENST00000507533 TBC1D32Q96NH3 1257 aa15.2■□□□□ 0.02
DDR1-260ENST00000507533 KIFC3Q9BVG8 833 aa15.2■□□□□ 0.02
DDR1-260ENST00000507533 CCDC94Q9BW85 323 aaPredicted RBP15.2■□□□□ 0.02
DDR1-260ENST00000507533 DNAJC25Q9H1X3 360 aa15.2■□□□□ 0.02
DDR1-260ENST00000507533 ATXN3LQ9H3M9 355 aa15.2■□□□□ 0.02
DDR1-260ENST00000507533 THG1LQ9NWX6 298 aaKnown RBP15.2■□□□□ 0.02
DDR1-260ENST00000507533 NEUROG3Q9Y4Z2 214 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms