RNA–Protein interactions for RNA: ENST00000506927.1

CLDND1-213, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-213ENST00000506927 E7ENQ6 273 aa6.28□□□□□ -1.4
CLDND1-213ENST00000506927 F8VZ95 297 aa6.28□□□□□ -1.4
CLDND1-213ENST00000506927 H0YGN5 161 aa6.28□□□□□ -1.4
CLDND1-213ENST00000506927 CLGNO14967 610 aa6.28□□□□□ -1.4
CLDND1-213ENST00000506927 SLC37A4O43826 429 aa6.28□□□□□ -1.4
CLDND1-213ENST00000506927 TLR2O60603 784 aa6.28□□□□□ -1.4
CLDND1-213ENST00000506927 CTNND1O60716 968 aaKnown RBP6.28□□□□□ -1.4
CLDND1-213ENST00000506927 RTN2O75298 545 aa6.28□□□□□ -1.4
CLDND1-213ENST00000506927 GCNT3O95395 438 aa6.28□□□□□ -1.4
CLDND1-213ENST00000506927 TDP2O95551 362 aa6.28□□□□□ -1.4
CLDND1-213ENST00000506927 LMNAP02545 664 aaKnown RBP6.28□□□□□ -1.4
CLDND1-213ENST00000506927 FGGP02679 453 aa6.28□□□□□ -1.4
CLDND1-213ENST00000506927 CYP11A1P05108 521 aa6.28□□□□□ -1.4
CLDND1-213ENST00000506927 CTSBP07858 339 aa6.28□□□□□ -1.4
CLDND1-213ENST00000506927 CYP3A4P08684 503 aa6.28□□□□□ -1.4
CLDND1-213ENST00000506927 MYBL1P10243 752 aa6.28□□□□□ -1.4
CLDND1-213ENST00000506927 ALDH3A1P30838 453 aa6.28□□□□□ -1.4
CLDND1-213ENST00000506927 GBP2P32456 591 aaPredicted RBP6.28□□□□□ -1.4
CLDND1-213ENST00000506927 SKIV2L2P42285 1042 aaKnown RBP6.28□□□□□ -1.4
CLDND1-213ENST00000506927 SLC1A1P43005 524 aa6.28□□□□□ -1.4
CLDND1-213ENST00000506927 PREPP48147 710 aa6.28□□□□□ -1.4
CLDND1-213ENST00000506927 BPIFB4P59827 614 aa6.28□□□□□ -1.4
CLDND1-213ENST00000506927 LACTBP83111 547 aaPredicted RBP6.28□□□□□ -1.4
CLDND1-213ENST00000506927 HDLBPQ00341 1268 aaKnown RBP6.28□□□□□ -1.4
CLDND1-213ENST00000506927 ATP2B2Q01814 1243 aa6.28□□□□□ -1.4
CLDND1-213ENST00000506927 RNASELQ05823 741 aaKnown RBP6.28□□□□□ -1.4
CLDND1-213ENST00000506927 MAPK7Q13164 816 aa6.28□□□□□ -1.4
CLDND1-213ENST00000506927 ITPK1Q13572 414 aa6.28□□□□□ -1.4
CLDND1-213ENST00000506927 GIT2Q14161 759 aa6.28□□□□□ -1.4
CLDND1-213ENST00000506927 POU4F3Q15319 338 aa6.28□□□□□ -1.4
CLDND1-213ENST00000506927 LRRC41Q15345 812 aa6.28□□□□□ -1.4
CLDND1-213ENST00000506927 EPHA7Q15375 998 aa6.28□□□□□ -1.4
CLDND1-213ENST00000506927 EZH2Q15910 746 aaKnown RBP6.28□□□□□ -1.4
CLDND1-213ENST00000506927 ANKRD20A8PQ5CZ79 823 aa6.28□□□□□ -1.4
CLDND1-213ENST00000506927 DCAF17Q5H9S7 520 aaPredicted RBP6.28□□□□□ -1.4
CLDND1-213ENST00000506927 RPS26P11Q5JNZ5 115 aaPredicted RBP6.28□□□□□ -1.4
CLDND1-213ENST00000506927 EXOSC6Q5RKV6 272 aaKnown RBP6.28□□□□□ -1.4
CLDND1-213ENST00000506927 MFSD14BQ5SR56 506 aa6.28□□□□□ -1.4
CLDND1-213ENST00000506927 ANKRD34AQ69YU3 496 aa6.28□□□□□ -1.4
CLDND1-213ENST00000506927 MFSD5Q6N075 450 aa6.28□□□□□ -1.4
CLDND1-213ENST00000506927 FDX2Q6P4F2 183 aa6.28□□□□□ -1.4
CLDND1-213ENST00000506927 CYB5D1Q6P9G0 228 aa6.28□□□□□ -1.4
CLDND1-213ENST00000506927 HHIPL2Q6UWX4 724 aa6.28□□□□□ -1.4
CLDND1-213ENST00000506927 ARHGEF18Q6ZSZ5 1173 aa6.28□□□□□ -1.4
CLDND1-213ENST00000506927 EPM2AIP1Q7L775 607 aaPredicted RBP6.28□□□□□ -1.4
CLDND1-213ENST00000506927 ZNF571Q7Z3V5 609 aaPredicted RBP6.28□□□□□ -1.4
CLDND1-213ENST00000506927 SYCP3Q8IZU3 236 aa6.28□□□□□ -1.4
CLDND1-213ENST00000506927 ANKRD35Q8N283 1001 aa6.28□□□□□ -1.4
CLDND1-213ENST00000506927 SAMD3Q8N6K7 520 aa6.28□□□□□ -1.4
CLDND1-213ENST00000506927 TEX9Q8N6V9 391 aa6.28□□□□□ -1.4
CLDND1-213ENST00000506927 CCDC63Q8NA47 563 aa6.28□□□□□ -1.4
CLDND1-213ENST00000506927 U2AF1L4Q8WU68 220 aaKnown RBP6.28□□□□□ -1.4
CLDND1-213ENST00000506927 ATXN2LQ8WWM7 1075 aaKnown RBP6.28□□□□□ -1.4
CLDND1-213ENST00000506927 RAPGEF5Q92565 580 aa6.28□□□□□ -1.4
CLDND1-213ENST00000506927 DHX38Q92620 1227 aaKnown RBP6.28□□□□□ -1.4
CLDND1-213ENST00000506927 UTP4Q969X6 686 aaKnown RBP6.28□□□□□ -1.4
CLDND1-213ENST00000506927 TLCD1Q96CP7 247 aa6.28□□□□□ -1.4
CLDND1-213ENST00000506927 HVCN1Q96D96 273 aa6.28□□□□□ -1.4
CLDND1-213ENST00000506927 CRAMP1Q96RY5 1269 aa6.28□□□□□ -1.4
CLDND1-213ENST00000506927 JPH2Q9BR39 696 aaPredicted RBP6.28□□□□□ -1.4
CLDND1-213ENST00000506927 ANO3Q9BYT9 981 aa6.28□□□□□ -1.4
CLDND1-213ENST00000506927 SLC40A1Q9NP59 571 aa6.28□□□□□ -1.4
CLDND1-213ENST00000506927 UBN1Q9NPG3 1134 aa6.28□□□□□ -1.4
CLDND1-213ENST00000506927 HAUS2Q9NVX0 235 aa6.28□□□□□ -1.4
CLDND1-213ENST00000506927 DONSONQ9NYP3 566 aa6.28□□□□□ -1.4
CLDND1-213ENST00000506927 NKIRAS1Q9NYS0 192 aa6.28□□□□□ -1.4
CLDND1-213ENST00000506927 TBC1D7Q9P0N9 293 aa6.28□□□□□ -1.4
CLDND1-213ENST00000506927 SENP1Q9P0U3 644 aa6.28□□□□□ -1.4
CLDND1-213ENST00000506927 WHRNQ9P202 907 aa6.28□□□□□ -1.4
CLDND1-213ENST00000506927 APEX2Q9UBZ4 518 aa6.28□□□□□ -1.4
CLDND1-213ENST00000506927 DDX20Q9UHI6 824 aaKnown RBP6.28□□□□□ -1.4
CLDND1-213ENST00000506927 TCEAL9Q9UHQ7 104 aa6.28□□□□□ -1.4
CLDND1-213ENST00000506927 SAP30BPQ9UHR5 308 aaKnown RBP6.28□□□□□ -1.4
CLDND1-213ENST00000506927 SLC12A6Q9UHW9 1150 aa6.28□□□□□ -1.4
CLDND1-213ENST00000506927 RPL26L1Q9UNX3 145 aaKnown RBP6.28□□□□□ -1.4
CLDND1-213ENST00000506927 TFR2Q9UP52 801 aa6.28□□□□□ -1.4
CLDND1-213ENST00000506927 STXBP5LQ9Y2K9 1186 aa6.28□□□□□ -1.4
CLDND1-213ENST00000506927 ACTL7BQ9Y614 415 aa6.28□□□□□ -1.4
CLDND1-213ENST00000506927 NFS1Q9Y697 457 aa6.28□□□□□ -1.4
CLDND1-213ENST00000506927 SPATA31A5Q5VU36 1347 aa6.27□□□□□ -1.41
CLDND1-213ENST00000506927 SPATA31A7Q8IWB4 1347 aa6.27□□□□□ -1.41
CLDND1-213ENST00000506927 ROBO1Q9Y6N7 1651 aa6.27□□□□□ -1.41
CLDND1-213ENST00000506927 IGKV6D-41A0A0C4DH26 115 aa6.27□□□□□ -1.41
CLDND1-213ENST00000506927 H0YCG3 227 aa6.27□□□□□ -1.41
CLDND1-213ENST00000506927 RASGRF2O14827 1237 aa6.27□□□□□ -1.41
CLDND1-213ENST00000506927 ATP2A1O14983 1001 aa6.27□□□□□ -1.41
CLDND1-213ENST00000506927 EPHB6O15197 1021 aa6.27□□□□□ -1.41
CLDND1-213ENST00000506927 DAPK3O43293 454 aa6.27□□□□□ -1.41
CLDND1-213ENST00000506927 DKC1O60832 514 aaKnown RBP eCLIP6.27□□□□□ -1.41
CLDND1-213ENST00000506927 MTA2O94776 668 aa6.27□□□□□ -1.41
CLDND1-213ENST00000506927 UFL1O94874 794 aa6.27□□□□□ -1.41
CLDND1-213ENST00000506927 ECEL1O95672 775 aa6.27□□□□□ -1.41
CLDND1-213ENST00000506927 TFRCP02786 760 aaKnown RBP6.27□□□□□ -1.41
CLDND1-213ENST00000506927 MMEP08473 750 aa6.27□□□□□ -1.41
CLDND1-213ENST00000506927 FAM153BP0C7A2 387 aa6.27□□□□□ -1.41
CLDND1-213ENST00000506927 VEGFAP15692 232 aaPredicted RBP6.27□□□□□ -1.41
CLDND1-213ENST00000506927 CCND1P24385 295 aa6.27□□□□□ -1.41
CLDND1-213ENST00000506927 ELF1P32519 619 aa6.27□□□□□ -1.41
CLDND1-213ENST00000506927 SREBF1P36956 1147 aa6.27□□□□□ -1.41
CLDND1-213ENST00000506927 MMP13P45452 471 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms