RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 ORC2Q13416 577 aaPredicted RBP6.4□□□□□ -1.38
GYPB-205ENST00000505583 GAS6Q14393 721 aa6.4□□□□□ -1.38
GYPB-205ENST00000505583 PUM1Q14671 1186 aaKnown RBP eCLIP6.4□□□□□ -1.38
GYPB-205ENST00000505583 LPAL2Q16609 132 aa6.4□□□□□ -1.38
GYPB-205ENST00000505583 TSR1Q2NL82 804 aaKnown RBP6.4□□□□□ -1.38
GYPB-205ENST00000505583 CTXN3Q4LDR2 81 aa6.4□□□□□ -1.38
GYPB-205ENST00000505583 STXBP5Q5T5C0 1151 aa6.4□□□□□ -1.38
GYPB-205ENST00000505583 HAUS3Q68CZ6 603 aa6.4□□□□□ -1.38
GYPB-205ENST00000505583 RINT1Q6NUQ1 792 aa6.4□□□□□ -1.38
GYPB-205ENST00000505583 MPZL3Q6UWV2 235 aa6.4□□□□□ -1.38
GYPB-205ENST00000505583 RNF19BQ6ZMZ0 732 aa6.4□□□□□ -1.38
GYPB-205ENST00000505583 RTL10Q7L3V2 364 aa6.4□□□□□ -1.38
GYPB-205ENST00000505583 MAP4K3Q8IVH8 894 aa6.4□□□□□ -1.38
GYPB-205ENST00000505583 LRRC15Q8TF66 581 aa6.4□□□□□ -1.38
GYPB-205ENST00000505583 ATRIPQ8WXE1 791 aa6.4□□□□□ -1.38
GYPB-205ENST00000505583 SUSD3Q96L08 255 aa6.4□□□□□ -1.38
GYPB-205ENST00000505583 TBC1D32Q96NH3 1257 aa6.4□□□□□ -1.38
GYPB-205ENST00000505583 ASB16Q96NS5 453 aa6.4□□□□□ -1.38
GYPB-205ENST00000505583 ACAP3Q96P50 834 aa6.4□□□□□ -1.38
GYPB-205ENST00000505583 LRRC3BQ96PB8 259 aa6.4□□□□□ -1.38
GYPB-205ENST00000505583 PGLYRP2Q96PD5 576 aa6.4□□□□□ -1.38
GYPB-205ENST00000505583 PNMA5Q96PV4 448 aa6.4□□□□□ -1.38
GYPB-205ENST00000505583 PLIN2Q99541 437 aa6.4□□□□□ -1.38
GYPB-205ENST00000505583 TCHPQ9BT92 498 aa6.4□□□□□ -1.38
GYPB-205ENST00000505583 CCDC94Q9BW85 323 aaPredicted RBP6.4□□□□□ -1.38
GYPB-205ENST00000505583 LRRC3Q9BY71 257 aa6.4□□□□□ -1.38
GYPB-205ENST00000505583 MRPL4Q9BYD3 311 aaKnown RBP6.4□□□□□ -1.38
GYPB-205ENST00000505583 EPC1Q9H2F5 836 aa6.4□□□□□ -1.38
GYPB-205ENST00000505583 TMEM134Q9H6X4 195 aa6.4□□□□□ -1.38
GYPB-205ENST00000505583 ZNF334Q9HCZ1 680 aaPredicted RBP6.4□□□□□ -1.38
GYPB-205ENST00000505583 PARD6AQ9NPB6 346 aa6.4□□□□□ -1.38
GYPB-205ENST00000505583 KMT5AQ9NQR1 393 aa6.4□□□□□ -1.38
GYPB-205ENST00000505583 PRMT8Q9NR22 394 aaPredicted RBP6.4□□□□□ -1.38
GYPB-205ENST00000505583 C2orf42Q9NWW7 574 aa6.4□□□□□ -1.38
GYPB-205ENST00000505583 CNTN3Q9P232 1028 aa6.4□□□□□ -1.38
GYPB-205ENST00000505583 ANKFY1Q9P2R3 1169 aa6.4□□□□□ -1.38
GYPB-205ENST00000505583 LIMCH1Q9UPQ0 1083 aa6.4□□□□□ -1.38
GYPB-205ENST00000505583 SMG5Q9UPR3 1016 aaKnown RBP6.4□□□□□ -1.38
GYPB-205ENST00000505583 PCDHGA2Q9Y5H1 932 aa6.4□□□□□ -1.38
GYPB-205ENST00000505583 TIMM13Q9Y5L4 95 aaPredicted RBP6.4□□□□□ -1.38
GYPB-205ENST00000505583 NUP210Q8TEM1 1887 aaPredicted RBP6.4□□□□□ -1.39
GYPB-205ENST00000505583 CEP250Q9BV73 2442 aa6.39□□□□□ -1.39
GYPB-205ENST00000505583 OBSL1O75147 1896 aa6.39□□□□□ -1.39
GYPB-205ENST00000505583 ARNTLO00327 626 aa6.39□□□□□ -1.39
GYPB-205ENST00000505583 PPEF2O14830 753 aa6.39□□□□□ -1.39
GYPB-205ENST00000505583 SPTLC1O15269 473 aa6.39□□□□□ -1.39
GYPB-205ENST00000505583 SOAT2O75908 522 aa6.39□□□□□ -1.39
GYPB-205ENST00000505583 CXCL8P10145 99 aa6.39□□□□□ -1.39
GYPB-205ENST00000505583 MAPTP10636 758 aaKnown RBP6.39□□□□□ -1.39
GYPB-205ENST00000505583 MYL4P12829 197 aa6.39□□□□□ -1.39
GYPB-205ENST00000505583 U2AF2P26368 475 aaKnown RBP eCLIP6.39□□□□□ -1.39
GYPB-205ENST00000505583 GDI1P31150 447 aa6.39□□□□□ -1.39
GYPB-205ENST00000505583 ELF1P32519 619 aa6.39□□□□□ -1.39
GYPB-205ENST00000505583 RPL9P32969 192 aaKnown RBP6.39□□□□□ -1.39
GYPB-205ENST00000505583 MCM4P33991 863 aa6.39□□□□□ -1.39
GYPB-205ENST00000505583 CLCN1P35523 988 aa6.39□□□□□ -1.39
GYPB-205ENST00000505583 TNFSF9P41273 254 aa6.39□□□□□ -1.39
GYPB-205ENST00000505583 RPS9P46781 194 aaKnown RBP6.39□□□□□ -1.39
GYPB-205ENST00000505583 SOX9P48436 509 aa6.39□□□□□ -1.39
GYPB-205ENST00000505583 TRAPPC10P48553 1259 aa6.39□□□□□ -1.39
GYPB-205ENST00000505583 ATXN1P54253 815 aaKnown RBP6.39□□□□□ -1.39
GYPB-205ENST00000505583 EPHA5P54756 1037 aa6.39□□□□□ -1.39
GYPB-205ENST00000505583 SATB1Q01826 763 aa6.39□□□□□ -1.39
GYPB-205ENST00000505583 SRSF5Q13243 272 aaKnown RBP6.39□□□□□ -1.39
GYPB-205ENST00000505583 DMP1Q13316 513 aaPredicted RBP6.39□□□□□ -1.39
GYPB-205ENST00000505583 PDIA5Q14554 519 aa6.39□□□□□ -1.39
GYPB-205ENST00000505583 TEAD2Q15562 447 aa6.39□□□□□ -1.39
GYPB-205ENST00000505583 ZRSR1Q15695 479 aaKnown RBP6.39□□□□□ -1.39
GYPB-205ENST00000505583 ZBTB6Q15916 424 aa6.39□□□□□ -1.39
GYPB-205ENST00000505583 ZNF852Q6ZMS4 543 aa6.39□□□□□ -1.39
GYPB-205ENST00000505583 PDZD4Q76G19 769 aaPredicted RBP6.39□□□□□ -1.39
GYPB-205ENST00000505583 TMC8Q8IU68 726 aa6.39□□□□□ -1.39
GYPB-205ENST00000505583 TTC9BQ8N6N2 239 aa6.39□□□□□ -1.39
GYPB-205ENST00000505583 TMEM161BQ8NDZ6 487 aa6.39□□□□□ -1.39
GYPB-205ENST00000505583 BEST2Q8NFU1 509 aa6.39□□□□□ -1.39
GYPB-205ENST00000505583 SHKBP1Q8TBC3 707 aa6.39□□□□□ -1.39
GYPB-205ENST00000505583 ZSCAN18Q8TBC5 510 aaPredicted RBP6.39□□□□□ -1.39
GYPB-205ENST00000505583 DNASE1L2Q92874 299 aa6.39□□□□□ -1.39
GYPB-205ENST00000505583 SMARCD2Q92925 531 aa6.39□□□□□ -1.39
GYPB-205ENST00000505583 TMEM209Q96SK2 561 aa6.39□□□□□ -1.39
GYPB-205ENST00000505583 NELL2Q99435 816 aa6.39□□□□□ -1.39
GYPB-205ENST00000505583 LLPHQ9BRT6 129 aaKnown RBP6.39□□□□□ -1.39
GYPB-205ENST00000505583 NTPCRQ9BSD7 190 aaKnown RBP6.39□□□□□ -1.39
GYPB-205ENST00000505583 MKNK1Q9BUB5 465 aa6.39□□□□□ -1.39
GYPB-205ENST00000505583 TRMT61BQ9BVS5 477 aaKnown RBP6.39□□□□□ -1.39
GYPB-205ENST00000505583 DNAJC25Q9H1X3 360 aa6.39□□□□□ -1.39
GYPB-205ENST00000505583 CHRDQ9H2X0 955 aa6.39□□□□□ -1.39
GYPB-205ENST00000505583 BRD9Q9H8M2 597 aa6.39□□□□□ -1.39
GYPB-205ENST00000505583 LMAN1LQ9HAT1 526 aa6.39□□□□□ -1.39
GYPB-205ENST00000505583 ZFP14Q9HCL3 533 aa6.39□□□□□ -1.39
GYPB-205ENST00000505583 TOPORSQ9NS56 1045 aaPredicted RBP6.39□□□□□ -1.39
GYPB-205ENST00000505583 RBM12Q9NTZ6 932 aaKnown RBP6.39□□□□□ -1.39
GYPB-205ENST00000505583 SLC38A7Q9NVC3 462 aa6.39□□□□□ -1.39
GYPB-205ENST00000505583 ZSCAN32Q9NX65 697 aa6.39□□□□□ -1.39
GYPB-205ENST00000505583 NCDNQ9UBB6 729 aa6.39□□□□□ -1.39
GYPB-205ENST00000505583 DNM3Q9UQ16 869 aa6.39□□□□□ -1.39
GYPB-205ENST00000505583 SLC27A5Q9Y2P5 690 aa6.39□□□□□ -1.39
GYPB-205ENST00000505583 NUB1Q9Y5A7 615 aa6.39□□□□□ -1.39
GYPB-205ENST00000505583 DENND4CQ5VZ89 1909 aa6.38□□□□□ -1.39
GYPB-205ENST00000505583 A0A1W2PRU2 124 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms