RNA–Protein interactions for RNA: ENST00000505392.5

CCHCR1-219, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 547 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-219ENST00000505392 SPATA31C1P0DKV0 1188 aa12.68□□□□□ -0.38
CCHCR1-219ENST00000505392 CPB1P15086 417 aa12.68□□□□□ -0.38
CCHCR1-219ENST00000505392 NAMPTP43490 491 aa12.68□□□□□ -0.38
CCHCR1-219ENST00000505392 ARHGAP29Q52LW3 1261 aa12.68□□□□□ -0.38
CCHCR1-219ENST00000505392 XKR4Q5GH76 650 aa12.68□□□□□ -0.38
CCHCR1-219ENST00000505392 STXBP5Q5T5C0 1151 aa12.68□□□□□ -0.38
CCHCR1-219ENST00000505392 TCEAL6Q6IPX3 200 aa12.68□□□□□ -0.38
CCHCR1-219ENST00000505392 ZNF280DQ6N043 979 aa12.68□□□□□ -0.38
CCHCR1-219ENST00000505392 PKN3Q6P5Z2 889 aa12.68□□□□□ -0.38
CCHCR1-219ENST00000505392 PADI6Q6TGC4 694 aa12.68□□□□□ -0.38
CCHCR1-219ENST00000505392 HAUS6Q7Z4H7 955 aa12.68□□□□□ -0.38
CCHCR1-219ENST00000505392 CATSPER3Q86XQ3 398 aa12.68□□□□□ -0.38
CCHCR1-219ENST00000505392 CEP120Q8N960 986 aa12.68□□□□□ -0.38
CCHCR1-219ENST00000505392 TCEAL3Q969E4 200 aa12.68□□□□□ -0.38
CCHCR1-219ENST00000505392 ZC3H10Q96K80 434 aaKnown RBP12.68□□□□□ -0.38
CCHCR1-219ENST00000505392 ZMAT2Q96NC0 199 aaKnown RBP12.68□□□□□ -0.38
CCHCR1-219ENST00000505392 KIFC3Q9BVG8 833 aa12.68□□□□□ -0.38
CCHCR1-219ENST00000505392 LRRC3Q9BY71 257 aa12.68□□□□□ -0.38
CCHCR1-219ENST00000505392 TOPORSQ9NS56 1045 aaPredicted RBP12.68□□□□□ -0.38
CCHCR1-219ENST00000505392 DAXXQ9UER7 740 aaPredicted RBP12.68□□□□□ -0.38
CCHCR1-219ENST00000505392 SLC8A2Q9UPR5 921 aa12.68□□□□□ -0.38
CCHCR1-219ENST00000505392 TICRRQ7Z2Z1 1910 aa12.67□□□□□ -0.38
CCHCR1-219ENST00000505392 TOP3BO95985 862 aaKnown RBP12.67□□□□□ -0.38
CCHCR1-219ENST00000505392 CYP11B2P19099 503 aa12.67□□□□□ -0.38
CCHCR1-219ENST00000505392 MARCKSP29966 332 aaPredicted RBP12.67□□□□□ -0.38
CCHCR1-219ENST00000505392 RPL9P32969 192 aaKnown RBP12.67□□□□□ -0.38
CCHCR1-219ENST00000505392 TNK2Q07912 1038 aa12.67□□□□□ -0.38
CCHCR1-219ENST00000505392 NR5A1Q13285 461 aa12.67□□□□□ -0.38
CCHCR1-219ENST00000505392 PLK5Q496M5 336 aa12.67□□□□□ -0.38
CCHCR1-219ENST00000505392 LRSAM1Q6UWE0 723 aa12.67□□□□□ -0.38
CCHCR1-219ENST00000505392 APBB1IPQ7Z5R6 666 aaPredicted RBP12.67□□□□□ -0.38
CCHCR1-219ENST00000505392 APPL2Q8NEU8 664 aa12.67□□□□□ -0.38
CCHCR1-219ENST00000505392 DDX12PQ92771 950 aa12.67□□□□□ -0.38
CCHCR1-219ENST00000505392 SUSD3Q96L08 255 aa12.67□□□□□ -0.38
CCHCR1-219ENST00000505392 TBC1D32Q96NH3 1257 aa12.67□□□□□ -0.38
CCHCR1-219ENST00000505392 NACC1Q96RE7 527 aa12.67□□□□□ -0.38
CCHCR1-219ENST00000505392 TMEM209Q96SK2 561 aa12.67□□□□□ -0.38
CCHCR1-219ENST00000505392 CCDC94Q9BW85 323 aaPredicted RBP12.67□□□□□ -0.38
CCHCR1-219ENST00000505392 ATXN3LQ9H3M9 355 aa12.67□□□□□ -0.38
CCHCR1-219ENST00000505392 ZSWIM6Q9HCJ5 1215 aa12.67□□□□□ -0.38
CCHCR1-219ENST00000505392 WASF3Q9UPY6 502 aa12.67□□□□□ -0.38
CCHCR1-219ENST00000505392 ZZEF1O43149 2961 aa12.66□□□□□ -0.38
CCHCR1-219ENST00000505392 SPEGQ15772 3267 aa12.66□□□□□ -0.38
CCHCR1-219ENST00000505392 SRRM3A6NNA2 597 aaPredicted RBP12.66□□□□□ -0.38
CCHCR1-219ENST00000505392 K7ERI5 159 aa12.66□□□□□ -0.38
CCHCR1-219ENST00000505392 ATG13O75143 517 aa12.66□□□□□ -0.38
CCHCR1-219ENST00000505392 MED24O75448 989 aa12.66□□□□□ -0.38
CCHCR1-219ENST00000505392 MCM4P33991 863 aa12.66□□□□□ -0.38
CCHCR1-219ENST00000505392 GRM5P41594 1212 aa12.66□□□□□ -0.38
CCHCR1-219ENST00000505392 EFNA5P52803 228 aa12.66□□□□□ -0.38
CCHCR1-219ENST00000505392 EPHB3P54753 998 aa12.66□□□□□ -0.38
CCHCR1-219ENST00000505392 ZNF252P-AS1Q0IIN9 211 aa12.66□□□□□ -0.38
CCHCR1-219ENST00000505392 DUSP4Q13115 394 aa12.66□□□□□ -0.38
CCHCR1-219ENST00000505392 PPP2R5AQ15172 486 aa12.66□□□□□ -0.38
CCHCR1-219ENST00000505392 SH3PXD2AQ5TCZ1 1133 aa12.66□□□□□ -0.38
CCHCR1-219ENST00000505392 DAB2IPQ5VWQ8 1189 aa12.66□□□□□ -0.38
CCHCR1-219ENST00000505392 TMC8Q8IU68 726 aa12.66□□□□□ -0.38
CCHCR1-219ENST00000505392 C18orf25Q96B23 403 aaPredicted RBP12.66□□□□□ -0.38
CCHCR1-219ENST00000505392 IFT74Q96LB3 600 aa12.66□□□□□ -0.38
CCHCR1-219ENST00000505392 ACAP3Q96P50 834 aa12.66□□□□□ -0.38
CCHCR1-219ENST00000505392 PGLYRP2Q96PD5 576 aa12.66□□□□□ -0.38
CCHCR1-219ENST00000505392 MTMR9Q96QG7 549 aa12.66□□□□□ -0.38
CCHCR1-219ENST00000505392 EDEM2Q9BV94 578 aa12.66□□□□□ -0.38
CCHCR1-219ENST00000505392 TMEM121BQ9BXQ6 578 aaPredicted RBP12.66□□□□□ -0.38
CCHCR1-219ENST00000505392 ADAM33Q9BZ11 813 aa12.66□□□□□ -0.38
CCHCR1-219ENST00000505392 DNAJC25Q9H1X3 360 aa12.66□□□□□ -0.38
CCHCR1-219ENST00000505392 TUFT1Q9NNX1 390 aa12.66□□□□□ -0.38
CCHCR1-219ENST00000505392 POLR3BQ9NW08 1133 aaPredicted RBP12.66□□□□□ -0.38
CCHCR1-219ENST00000505392 TNFSF13BQ9Y275 285 aa12.66□□□□□ -0.38
CCHCR1-219ENST00000505392 SLC27A5Q9Y2P5 690 aa12.66□□□□□ -0.38
CCHCR1-219ENST00000505392 YIPF1Q9Y548 306 aa12.66□□□□□ -0.38
CCHCR1-219ENST00000505392 COL4A2P08572 1712 aa12.65□□□□□ -0.38
CCHCR1-219ENST00000505392 ARHGEF35A5YM69 484 aa12.65□□□□□ -0.38
CCHCR1-219ENST00000505392 AKAP3O75969 853 aa12.65□□□□□ -0.38
CCHCR1-219ENST00000505392 CDKL5O76039 1030 aa12.65□□□□□ -0.38
CCHCR1-219ENST00000505392 CAVIN2O95810 425 aa12.65□□□□□ -0.38
CCHCR1-219ENST00000505392 OR4Q2P0C623 313 aa12.65□□□□□ -0.38
CCHCR1-219ENST00000505392 KCNE1P15382 129 aa12.65□□□□□ -0.38
CCHCR1-219ENST00000505392 KRT2P35908 639 aa12.65□□□□□ -0.38
CCHCR1-219ENST00000505392 ALDH1A3P47895 512 aa12.65□□□□□ -0.38
CCHCR1-219ENST00000505392 CACNB1Q02641 598 aaPredicted RBP12.65□□□□□ -0.38
CCHCR1-219ENST00000505392 CREB5Q02930 508 aa12.65□□□□□ -0.38
CCHCR1-219ENST00000505392 RING1Q06587 406 aa12.65□□□□□ -0.38
CCHCR1-219ENST00000505392 SCRN1Q12765 414 aa12.65□□□□□ -0.38
CCHCR1-219ENST00000505392 GRSF1Q12849 480 aaKnown RBP eCLIP12.65□□□□□ -0.38
CCHCR1-219ENST00000505392 PLD1Q13393 1074 aa12.65□□□□□ -0.38
CCHCR1-219ENST00000505392 PTPAQ15257 358 aa12.65□□□□□ -0.38
CCHCR1-219ENST00000505392 ITPRIPL2Q3MIP1 535 aa12.65□□□□□ -0.38
CCHCR1-219ENST00000505392 GPR158Q5T848 1215 aa12.65□□□□□ -0.38
CCHCR1-219ENST00000505392 GAREM2Q75VX8 874 aa12.65□□□□□ -0.38
CCHCR1-219ENST00000505392 DNAJB7Q7Z6W7 309 aaPredicted RBP12.65□□□□□ -0.38
CCHCR1-219ENST00000505392 CAMKK1Q8N5S9 505 aa12.65□□□□□ -0.38
CCHCR1-219ENST00000505392 BEST2Q8NFU1 509 aa12.65□□□□□ -0.38
CCHCR1-219ENST00000505392 BPIFB1Q8TDL5 484 aa12.65□□□□□ -0.38
CCHCR1-219ENST00000505392 MKNK1Q9BUB5 465 aa12.65□□□□□ -0.38
CCHCR1-219ENST00000505392 SCNM1Q9BWG6 230 aa12.65□□□□□ -0.38
CCHCR1-219ENST00000505392 DUSP15Q9H1R2 295 aaPredicted RBP12.65□□□□□ -0.38
CCHCR1-219ENST00000505392 CRISPLD1Q9H336 500 aa12.65□□□□□ -0.38
CCHCR1-219ENST00000505392 OBP2AQ9NY56 170 aa12.65□□□□□ -0.38
CCHCR1-219ENST00000505392 TPCN1Q9ULQ1 816 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms