RNA–Protein interactions for RNA: ENST00000505077.1

RFC1-210, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-210ENST00000505077 TMCO2Q7Z6W1 182 aaPredicted RBP11.03□□□□□ -0.64
RFC1-210ENST00000505077 ZNF280BQ86YH2 543 aa11.03□□□□□ -0.64
RFC1-210ENST00000505077 EHBP1Q8NDI1 1231 aa11.03□□□□□ -0.64
RFC1-210ENST00000505077 JAKMIP2Q96AA8 810 aa11.03□□□□□ -0.64
RFC1-210ENST00000505077 NT5C1BQ96P26 610 aa11.03□□□□□ -0.64
RFC1-210ENST00000505077 TRIM5Q9C035 493 aa11.03□□□□□ -0.64
RFC1-210ENST00000505077 XPO4Q9C0E2 1151 aaKnown RBP11.03□□□□□ -0.64
RFC1-210ENST00000505077 NIF3L1Q9GZT8 377 aa11.03□□□□□ -0.64
RFC1-210ENST00000505077 INTS2Q9H0H0 1204 aaKnown RBP11.03□□□□□ -0.64
RFC1-210ENST00000505077 XYLT2Q9H1B5 865 aa11.03□□□□□ -0.64
RFC1-210ENST00000505077 GRPEL1Q9HAV7 217 aa11.03□□□□□ -0.64
RFC1-210ENST00000505077 GOLGA2P5Q9HBQ8 144 aa11.03□□□□□ -0.64
RFC1-210ENST00000505077 GDAP2Q9NXN4 497 aa11.03□□□□□ -0.64
RFC1-210ENST00000505077 APEX2Q9UBZ4 518 aa11.03□□□□□ -0.64
RFC1-210ENST00000505077 DNAJB4Q9UDY4 337 aa11.03□□□□□ -0.64
RFC1-210ENST00000505077 MSRAQ9UJ68 235 aa11.03□□□□□ -0.64
RFC1-210ENST00000505077 FBXL5Q9UKA1 691 aa11.03□□□□□ -0.64
RFC1-210ENST00000505077 AGAP1Q9UPQ3 857 aa11.03□□□□□ -0.64
RFC1-210ENST00000505077 FAN1Q9Y2M0 1017 aa11.03□□□□□ -0.64
RFC1-210ENST00000505077 NUB1Q9Y5A7 615 aa11.03□□□□□ -0.64
RFC1-210ENST00000505077 PCDHB12Q9Y5F1 795 aa11.03□□□□□ -0.64
RFC1-210ENST00000505077 SF3B1O75533 1304 aaKnown RBP eCLIP11.03□□□□□ -0.64
RFC1-210ENST00000505077 ITIH6Q6UXX5 1313 aa11.03□□□□□ -0.64
RFC1-210ENST00000505077 MYO7AQ13402 2215 aa11.03□□□□□ -0.64
RFC1-210ENST00000505077 KPNA7A9QM74 516 aa11.02□□□□□ -0.65
RFC1-210ENST00000505077 B4GALT3O60512 393 aa11.02□□□□□ -0.65
RFC1-210ENST00000505077 B3GAT3O94766 335 aa11.02□□□□□ -0.65
RFC1-210ENST00000505077 KIF4AO95239 1232 aa11.02□□□□□ -0.65
RFC1-210ENST00000505077 GALTP07902 379 aa11.02□□□□□ -0.65
RFC1-210ENST00000505077 FAM163BP0C2L3 166 aa11.02□□□□□ -0.65
RFC1-210ENST00000505077 PON1P27169 355 aa11.02□□□□□ -0.65
RFC1-210ENST00000505077 OR1G1P47890 313 aa11.02□□□□□ -0.65
RFC1-210ENST00000505077 SLC11A1P49279 550 aa11.02□□□□□ -0.65
RFC1-210ENST00000505077 PSEN1P49768 467 aa11.02□□□□□ -0.65
RFC1-210ENST00000505077 GUCY2FP51841 1108 aa11.02□□□□□ -0.65
RFC1-210ENST00000505077 LILRA4P59901 499 aa11.02□□□□□ -0.65
RFC1-210ENST00000505077 MYL6P60660 151 aa11.02□□□□□ -0.65
RFC1-210ENST00000505077 YWHAEP62258 255 aaKnown RBP11.02□□□□□ -0.65
RFC1-210ENST00000505077 TNNC1P63316 161 aa11.02□□□□□ -0.65
RFC1-210ENST00000505077 TRIM14Q14142 442 aa11.02□□□□□ -0.65
RFC1-210ENST00000505077 SYCP1Q15431 976 aa11.02□□□□□ -0.65
RFC1-210ENST00000505077 FIGNQ5HY92 759 aa11.02□□□□□ -0.65
RFC1-210ENST00000505077 SPOUT1Q5T280 376 aaKnown RBP11.02□□□□□ -0.65
RFC1-210ENST00000505077 PRPF38BQ5VTL8 546 aaKnown RBP11.02□□□□□ -0.65
RFC1-210ENST00000505077 KCNT2Q6UVM3 1135 aa11.02□□□□□ -0.65
RFC1-210ENST00000505077 CHRDL2Q6WN34 429 aa11.02□□□□□ -0.65
RFC1-210ENST00000505077 DPH6Q7L8W6 267 aa11.02□□□□□ -0.65
RFC1-210ENST00000505077 FMNL3Q8IVF7 1028 aa11.02□□□□□ -0.65
RFC1-210ENST00000505077 TOP6BLQ8N6T0 577 aa11.02□□□□□ -0.65
RFC1-210ENST00000505077 COLGALT1Q8NBJ5 622 aa11.02□□□□□ -0.65
RFC1-210ENST00000505077 LMO3Q8TAP4 145 aa11.02□□□□□ -0.65
RFC1-210ENST00000505077 TMEM169Q96HH4 297 aa11.02□□□□□ -0.65
RFC1-210ENST00000505077 NAP1L5Q96NT1 182 aaPredicted RBP11.02□□□□□ -0.65
RFC1-210ENST00000505077 DNAI2Q9GZS0 605 aa11.02□□□□□ -0.65
RFC1-210ENST00000505077 ZMYND15Q9H091 742 aa11.02□□□□□ -0.65
RFC1-210ENST00000505077 SPG21Q9NZD8 308 aa11.02□□□□□ -0.65
RFC1-210ENST00000505077 ADAM28Q9UKQ2 775 aa11.02□□□□□ -0.65
RFC1-210ENST00000505077 DSEQ9UL01 958 aa11.02□□□□□ -0.65
RFC1-210ENST00000505077 PCDHB8Q9UN66 801 aa11.02□□□□□ -0.65
RFC1-210ENST00000505077 SIK3Q9Y2K2 1263 aa11.02□□□□□ -0.65
RFC1-210ENST00000505077 ZNF638Q14966 1978 aaKnown RBP11.02□□□□□ -0.65
RFC1-210ENST00000505077 PLXNA3P51805 1871 aa11.02□□□□□ -0.65
RFC1-210ENST00000505077 LINC01553A4QN01 128 aa11.01□□□□□ -0.65
RFC1-210ENST00000505077 C5orf67F2Z3F1 127 aa11.01□□□□□ -0.65
RFC1-210ENST00000505077 RBAK-RBAKDNI3L0D1 243 aa11.01□□□□□ -0.65
RFC1-210ENST00000505077 M0QZQ0 153 aa11.01□□□□□ -0.65
RFC1-210ENST00000505077 NRP1O14786 923 aa11.01□□□□□ -0.65
RFC1-210ENST00000505077 SYN3O14994 580 aa11.01□□□□□ -0.65
RFC1-210ENST00000505077 CLSTN1O94985 981 aa11.01□□□□□ -0.65
RFC1-210ENST00000505077 RB1P06400 928 aa11.01□□□□□ -0.65
RFC1-210ENST00000505077 LINC00271P0C7V0 271 aa11.01□□□□□ -0.65
RFC1-210ENST00000505077 ODC1P11926 461 aa11.01□□□□□ -0.65
RFC1-210ENST00000505077 TRIM21P19474 475 aaKnown RBP11.01□□□□□ -0.65
RFC1-210ENST00000505077 CDC25BP30305 580 aa11.01□□□□□ -0.65
RFC1-210ENST00000505077 PBX1P40424 430 aa11.01□□□□□ -0.65
RFC1-210ENST00000505077 UBE3AQ05086 875 aa11.01□□□□□ -0.65
RFC1-210ENST00000505077 WDR72Q3MJ13 1102 aa11.01□□□□□ -0.65
RFC1-210ENST00000505077 LRIT3Q3SXY7 679 aa11.01□□□□□ -0.65
RFC1-210ENST00000505077 SPECC1LQ69YQ0 1117 aa11.01□□□□□ -0.65
RFC1-210ENST00000505077 PDXDC1Q6P996 788 aa11.01□□□□□ -0.65
RFC1-210ENST00000505077 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.01□□□□□ -0.65
RFC1-210ENST00000505077 VSTM4Q8IW00 320 aa11.01□□□□□ -0.65
RFC1-210ENST00000505077 GPR65Q8IYL9 337 aa11.01□□□□□ -0.65
RFC1-210ENST00000505077 SLC39A11Q8N1S5 342 aa11.01□□□□□ -0.65
RFC1-210ENST00000505077 TMEM86AQ8N2M4 240 aa11.01□□□□□ -0.65
RFC1-210ENST00000505077 C3orf58Q8NDZ4 430 aa11.01□□□□□ -0.65
RFC1-210ENST00000505077 NEK11Q8NG66 645 aa11.01□□□□□ -0.65
RFC1-210ENST00000505077 ANP32BQ92688 251 aaKnown RBP11.01□□□□□ -0.65
RFC1-210ENST00000505077 SEMA4DQ92854 862 aa11.01□□□□□ -0.65
RFC1-210ENST00000505077 IGSF21Q96ID5 467 aa11.01□□□□□ -0.65
RFC1-210ENST00000505077 SUSD3Q96L08 255 aa11.01□□□□□ -0.65
RFC1-210ENST00000505077 TGS1Q96RS0 853 aaKnown RBP11.01□□□□□ -0.65
RFC1-210ENST00000505077 PAAF1Q9BRP4 392 aa11.01□□□□□ -0.65
RFC1-210ENST00000505077 CRACR2AQ9BSW2 395 aa11.01□□□□□ -0.65
RFC1-210ENST00000505077 C11orf84Q9BUA3 381 aaPredicted RBP11.01□□□□□ -0.65
RFC1-210ENST00000505077 NUP58Q9BVL2 599 aa11.01□□□□□ -0.65
RFC1-210ENST00000505077 BCO2Q9BYV7 579 aa11.01□□□□□ -0.65
RFC1-210ENST00000505077 EDEM3Q9BZQ6 932 aa11.01□□□□□ -0.65
RFC1-210ENST00000505077 CYP3A43Q9HB55 503 aa11.01□□□□□ -0.65
RFC1-210ENST00000505077 MARCH5Q9NX47 278 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms