RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 GDF9O60383 454 aa14.33□□□□□ -0.12
DDX41-204ENST00000504807 PIGRP01833 764 aa14.33□□□□□ -0.12
DDX41-204ENST00000504807 FSHRP23945 695 aa14.33□□□□□ -0.12
DDX41-204ENST00000504807 LONP1P36776 959 aaKnown RBP14.33□□□□□ -0.12
DDX41-204ENST00000504807 UBA7P41226 1012 aa14.33□□□□□ -0.12
DDX41-204ENST00000504807 WNT7BP56706 349 aa14.33□□□□□ -0.12
DDX41-204ENST00000504807 CEBPZQ03701 1054 aaKnown RBP14.33□□□□□ -0.12
DDX41-204ENST00000504807 ELAVL2Q12926 359 aaKnown RBP14.33□□□□□ -0.12
DDX41-204ENST00000504807 STRN3Q13033 797 aa14.33□□□□□ -0.12
DDX41-204ENST00000504807 UBXN2BQ14CS0 331 aa14.33□□□□□ -0.12
DDX41-204ENST00000504807 SLC8B1Q6J4K2 584 aa14.33□□□□□ -0.12
DDX41-204ENST00000504807 PARM1Q6UWI2 310 aa14.33□□□□□ -0.12
DDX41-204ENST00000504807 ZSWIM2Q8NEG5 633 aa14.33□□□□□ -0.12
DDX41-204ENST00000504807 TOPORSQ9NS56 1045 aaPredicted RBP14.33□□□□□ -0.12
DDX41-204ENST00000504807 KCND2Q9NZV8 630 aa14.33□□□□□ -0.12
DDX41-204ENST00000504807 FBXL5Q9UKA1 691 aa14.33□□□□□ -0.12
DDX41-204ENST00000504807 ODF2LQ9ULJ1 636 aa14.33□□□□□ -0.12
DDX41-204ENST00000504807 NUMBLQ9Y6R0 609 aa14.33□□□□□ -0.12
DDX41-204ENST00000504807 CITO14578 2027 aa14.32□□□□□ -0.12
DDX41-204ENST00000504807 CLDN3O15551 220 aa14.32□□□□□ -0.12
DDX41-204ENST00000504807 STARD6P59095 220 aa14.32□□□□□ -0.12
DDX41-204ENST00000504807 SHC2P98077 582 aa14.32□□□□□ -0.12
DDX41-204ENST00000504807 KCNA1Q09470 495 aa14.32□□□□□ -0.12
DDX41-204ENST00000504807 SNW1Q13573 536 aaKnown RBP14.32□□□□□ -0.12
DDX41-204ENST00000504807 PPM1LQ5SGD2 360 aa14.32□□□□□ -0.12
DDX41-204ENST00000504807 KCTD17Q8N5Z5 321 aa14.32□□□□□ -0.12
DDX41-204ENST00000504807 MYCT1Q8N699 235 aa14.32□□□□□ -0.12
DDX41-204ENST00000504807 ING5Q8WYH8 240 aa14.32□□□□□ -0.12
DDX41-204ENST00000504807 LARP4BQ92615 738 aaKnown RBP14.32□□□□□ -0.12
DDX41-204ENST00000504807 STAMQ92783 540 aa14.32□□□□□ -0.12
DDX41-204ENST00000504807 NXPE3Q969Y0 559 aa14.32□□□□□ -0.12
DDX41-204ENST00000504807 CALML4Q96GE6 196 aa14.32□□□□□ -0.12
DDX41-204ENST00000504807 SHDQ96IW2 340 aa14.32□□□□□ -0.12
DDX41-204ENST00000504807 FAM84AQ96KN4 292 aa14.32□□□□□ -0.12
DDX41-204ENST00000504807 SUSD3Q96L08 255 aa14.32□□□□□ -0.12
DDX41-204ENST00000504807 USP28Q96RU2 1077 aa14.32□□□□□ -0.12
DDX41-204ENST00000504807 CCSER1Q9C0I3 900 aa14.32□□□□□ -0.12
DDX41-204ENST00000504807 RAB23Q9ULC3 237 aa14.32□□□□□ -0.12
DDX41-204ENST00000504807 TIMM13Q9Y5L4 95 aaPredicted RBP14.32□□□□□ -0.12
DDX41-204ENST00000504807 A0A0B4J269 797 aa14.31□□□□□ -0.12
DDX41-204ENST00000504807 KANSL1LA0AUZ9 987 aa14.31□□□□□ -0.12
DDX41-204ENST00000504807 MYMKA6NI61 221 aa14.31□□□□□ -0.12
DDX41-204ENST00000504807 C1QTNF9BB2RNN3 333 aa14.31□□□□□ -0.12
DDX41-204ENST00000504807 TRAK2O60296 914 aa14.31□□□□□ -0.12
DDX41-204ENST00000504807 ABLIM3O94929 683 aa14.31□□□□□ -0.12
DDX41-204ENST00000504807 ADRB2P07550 413 aa14.31□□□□□ -0.12
DDX41-204ENST00000504807 HNRNPA1P09651 372 aaKnown RBP eCLIP14.31□□□□□ -0.12
DDX41-204ENST00000504807 OR4Q2P0C623 313 aa14.31□□□□□ -0.12
DDX41-204ENST00000504807 C1QTNF9P0C862 333 aa14.31□□□□□ -0.12
DDX41-204ENST00000504807 HOXA9P31269 272 aa14.31□□□□□ -0.12
DDX41-204ENST00000504807 CCR2P41597 374 aa14.31□□□□□ -0.12
DDX41-204ENST00000504807 CDR1P51861 262 aa14.31□□□□□ -0.12
DDX41-204ENST00000504807 CASP5P51878 434 aa14.31□□□□□ -0.12
DDX41-204ENST00000504807 SMTNP53814 917 aa14.31□□□□□ -0.12
DDX41-204ENST00000504807 ARPP19P56211 112 aa14.31□□□□□ -0.12
DDX41-204ENST00000504807 LIN9Q5TKA1 542 aa14.31□□□□□ -0.12
DDX41-204ENST00000504807 ANKS3Q6ZW76 656 aa14.31□□□□□ -0.12
DDX41-204ENST00000504807 DYMQ7RTS9 669 aa14.31□□□□□ -0.12
DDX41-204ENST00000504807 SFR1Q86XK3 245 aa14.31□□□□□ -0.12
DDX41-204ENST00000504807 MAP4K3Q8IVH8 894 aa14.31□□□□□ -0.12
DDX41-204ENST00000504807 NPAS3Q8IXF0 933 aa14.31□□□□□ -0.12
DDX41-204ENST00000504807 DDX12PQ92771 950 aa14.31□□□□□ -0.12
DDX41-204ENST00000504807 FGF13Q92913 245 aa14.31□□□□□ -0.12
DDX41-204ENST00000504807 DNAJC19Q96DA6 116 aa14.31□□□□□ -0.12
DDX41-204ENST00000504807 STRA6Q9BX79 667 aa14.31□□□□□ -0.12
DDX41-204ENST00000504807 CRISPLD1Q9H336 500 aa14.31□□□□□ -0.12
DDX41-204ENST00000504807 PARVGQ9HBI0 331 aa14.31□□□□□ -0.12
DDX41-204ENST00000504807 SLC2A4RGQ9NR83 387 aa14.31□□□□□ -0.12
DDX41-204ENST00000504807 SLC38A7Q9NVC3 462 aa14.31□□□□□ -0.12
DDX41-204ENST00000504807 LARSQ9P2J5 1176 aaKnown RBP14.31□□□□□ -0.12
DDX41-204ENST00000504807 DPP7Q9UHL4 492 aa14.31□□□□□ -0.12
DDX41-204ENST00000504807 CPSF3Q9UKF6 684 aaKnown RBP14.31□□□□□ -0.12
DDX41-204ENST00000504807 POLIQ9UNA4 740 aa14.31□□□□□ -0.12
DDX41-204ENST00000504807 TSC2P49815 1807 aa14.31□□□□□ -0.12
DDX41-204ENST00000504807 FAM170BA6NMN3 283 aa14.3□□□□□ -0.12
DDX41-204ENST00000504807 HNRNPDLO14979 420 aaKnown RBP14.3□□□□□ -0.12
DDX41-204ENST00000504807 SLC26A4O43511 780 aa14.3□□□□□ -0.12
DDX41-204ENST00000504807 PPP1R37O75864 691 aa14.3□□□□□ -0.12
DDX41-204ENST00000504807 FAM13AO94988 1023 aa14.3□□□□□ -0.12
DDX41-204ENST00000504807 ZIC2O95409 532 aaPredicted RBP14.3□□□□□ -0.12
DDX41-204ENST00000504807 NFICP08651 508 aa14.3□□□□□ -0.12
DDX41-204ENST00000504807 CLTAP09496 248 aa14.3□□□□□ -0.12
DDX41-204ENST00000504807 LRPAP1P30533 357 aa14.3□□□□□ -0.12
DDX41-204ENST00000504807 DDIT3P35638 169 aa14.3□□□□□ -0.12
DDX41-204ENST00000504807 AARSP49588 968 aaKnown RBP eCLIP14.3□□□□□ -0.12
DDX41-204ENST00000504807 LIG4P49917 911 aa14.3□□□□□ -0.12
DDX41-204ENST00000504807 GPC5P78333 572 aa14.3□□□□□ -0.12
DDX41-204ENST00000504807 GTF2BQ00403 316 aa14.3□□□□□ -0.12
DDX41-204ENST00000504807 JADE1Q6IE81 842 aa14.3□□□□□ -0.12
DDX41-204ENST00000504807 CRELD2Q6UXH1 353 aaPredicted RBP14.3□□□□□ -0.12
DDX41-204ENST00000504807 RNF19BQ6ZMZ0 732 aa14.3□□□□□ -0.12
DDX41-204ENST00000504807 PRR23CQ6ZRP0 262 aa14.3□□□□□ -0.12
DDX41-204ENST00000504807 APBB1IPQ7Z5R6 666 aaPredicted RBP14.3□□□□□ -0.12
DDX41-204ENST00000504807 DDX1Q92499 740 aaKnown RBP14.3□□□□□ -0.12
DDX41-204ENST00000504807 NELL1Q92832 810 aa14.3□□□□□ -0.12
DDX41-204ENST00000504807 TCEAL4Q96EI5 215 aa14.3□□□□□ -0.12
DDX41-204ENST00000504807 KIF12Q96FN5 646 aa14.3□□□□□ -0.12
DDX41-204ENST00000504807 BICD1Q96G01 975 aa14.3□□□□□ -0.12
DDX41-204ENST00000504807 TMEM209Q96SK2 561 aa14.3□□□□□ -0.12
DDX41-204ENST00000504807 PLA2G2FQ9BZM2 168 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms