RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 WHAMMQ8TF30 809 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 LZICQ8WZA0 190 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 MOGAT1Q96PD6 335 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 GBP5Q96PP8 586 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 GMLQ99445 158 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 TUBGCP2Q9BSJ2 902 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 AP1M1Q9BXS5 423 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 TM6SF1Q9BZW5 370 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 KLHL4Q9C0H6 718 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 SCPEP1Q9HB40 452 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 SPON1Q9HCB6 807 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 INTS9Q9NV88 658 aaKnown RBP3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 INTS13Q9NVM9 706 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 TBCCD1Q9NVR7 557 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 ZNHIT2Q9UHR6 403 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 TSR3Q9UJK0 312 aaKnown RBP3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 TINAGQ9UJW2 476 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 AMFRQ9UKV5 643 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 TTC7AQ9ULT0 858 aaPredicted RBP3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 NOVA2Q9UNW9 492 aaKnown RBP3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 PCDHGA2Q9Y5H1 932 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 MYH4Q9Y623 1939 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 TNKSO95271 1327 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 RTL9Q8NET4 1388 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 CACNA1SQ13698 1873 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 SYNJ2BP-COX16A0A087WUM0 186 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 BHMG1C9JSJ3 638 aaPredicted RBP3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 CLIC2O15247 247 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 PDE8AO60658 829 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 KLHL41O60662 606 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 NOL3O60936 208 aaKnown RBP3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 UFL1O94874 794 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 RPN1P04843 607 aaKnown RBP3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 GSTM1P09488 218 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 INHBBP09529 407 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 ACSL1P33121 698 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 PHKA1P46020 1223 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 RNF144AP50876 292 aaPredicted RBP3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 TUBA1BP68363 451 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 IGBP1P78318 339 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 CHRNEQ04844 493 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 PTGISQ16647 500 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 MOGQ16653 247 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 DOK7Q18PE1 504 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 LEXMQ3ZCV2 418 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 EPHA10Q5JZY3 1008 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 PHLDB3Q6NSJ2 640 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 TUBA1AQ71U36 451 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 ANO5Q75V66 913 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 GPBP1Q86WP2 473 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 ANKMY2Q8IV38 441 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 NKAIN4Q8IVV8 208 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 SPARTQ8N0X7 666 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 UBL4BQ8N7F7 174 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 NKX2-3Q8TAU0 364 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 SPOCK2Q92563 424 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 ATP6V0A1Q93050 837 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 RNF34Q969K3 372 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 ABTB1Q969K4 478 aaPredicted RBP3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 MAGOHBQ96A72 148 aaKnown RBP3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 KLHL29Q96CT2 875 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 GMCL1Q96IK5 515 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 SPATA17Q96L03 361 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 CTRCQ99895 268 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 NUF2Q9BZD4 464 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 CPVLQ9H3G5 476 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 HAUS4Q9H6D7 363 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 KANSL2Q9H9L4 492 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 CCDC177Q9NQR7 707 aaPredicted RBP3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 COX16Q9P0S2 106 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 ADAMTS1Q9UHI8 967 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 SFMBT1Q9UHJ3 866 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 GGT7Q9UJ14 662 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 DNM3Q9UQ16 869 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 INPP5FQ9Y2H2 1132 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 HYOU1Q9Y4L1 999 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 AFG3L2Q9Y4W6 797 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 COL15A1P39059 1388 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 GTPBP10A4D1E9 387 aaKnown RBP3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 hCG_1984214I3L0E3 225 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 XPO1O14980 1071 aaKnown RBP3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 ZW10O43264 779 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 DAPK3O43293 454 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 THAP12O43422 761 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 SNX2O60749 519 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 PFKFB2O60825 505 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 TRPA1O75762 1119 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 SEC24DO94855 1032 aaPredicted RBP3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 ASMTLO95671 621 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 OAS1P00973 400 aaKnown RBP3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 KRT14P02533 472 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 CHGBP05060 677 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 H2AFZP0C0S5 128 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 APEHP13798 732 aaKnown RBP3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 PDE6AP16499 860 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 ATP6V1C1P21283 382 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 GBP1P32455 592 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 ARFIP1P53367 373 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms