RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.85□□□□□ -0.67
NUP54-203ENST00000504173 OTOGLQ3ZCN5 2332 aa10.85□□□□□ -0.67
NUP54-203ENST00000504173 CASTOR2A6NHX0 329 aa10.84□□□□□ -0.67
NUP54-203ENST00000504173 B4GALT3O60512 393 aa10.84□□□□□ -0.67
NUP54-203ENST00000504173 GNA14O95837 355 aa10.84□□□□□ -0.67
NUP54-203ENST00000504173 TMEM191BP0C7N4 346 aa10.84□□□□□ -0.67
NUP54-203ENST00000504173 TNNI1P19237 187 aa10.84□□□□□ -0.67
NUP54-203ENST00000504173 CTNNB1P35222 781 aa10.84□□□□□ -0.67
NUP54-203ENST00000504173 VAMP7P51809 220 aa10.84□□□□□ -0.67
NUP54-203ENST00000504173 TFAMQ00059 246 aaKnown RBP10.84□□□□□ -0.67
NUP54-203ENST00000504173 DSC1Q08554 894 aa10.84□□□□□ -0.67
NUP54-203ENST00000504173 HYAL1Q12794 435 aa10.84□□□□□ -0.67
NUP54-203ENST00000504173 BFSP1Q12934 665 aa10.84□□□□□ -0.67
NUP54-203ENST00000504173 TUSC3Q13454 348 aa10.84□□□□□ -0.67
NUP54-203ENST00000504173 GPM6BQ13491 265 aa10.84□□□□□ -0.67
NUP54-203ENST00000504173 PTPN21Q16825 1174 aa10.84□□□□□ -0.67
NUP54-203ENST00000504173 SPATA1Q5VX52 437 aa10.84□□□□□ -0.67
NUP54-203ENST00000504173 LMBRD2Q68DH5 695 aaPredicted RBP10.84□□□□□ -0.67
NUP54-203ENST00000504173 NT5DC4Q86YG4 428 aa10.84□□□□□ -0.67
NUP54-203ENST00000504173 WDR49Q8IV35 697 aa10.84□□□□□ -0.67
NUP54-203ENST00000504173 COLGALT2Q8IYK4 626 aa10.84□□□□□ -0.67
NUP54-203ENST00000504173 KIAA2013Q8IYS2 634 aa10.84□□□□□ -0.67
NUP54-203ENST00000504173 COLGALT1Q8NBJ5 622 aa10.84□□□□□ -0.67
NUP54-203ENST00000504173 ENOX1Q8TC92 643 aaKnown RBP10.84□□□□□ -0.67
NUP54-203ENST00000504173 CACTINQ8WUQ7 758 aaKnown RBP10.84□□□□□ -0.67
NUP54-203ENST00000504173 ZNF558Q96NG5 402 aa10.84□□□□□ -0.67
NUP54-203ENST00000504173 TMEM175Q9BSA9 504 aa10.84□□□□□ -0.67
NUP54-203ENST00000504173 THAP9Q9H5L6 903 aa10.84□□□□□ -0.67
NUP54-203ENST00000504173 METTL14Q9HCE5 456 aaKnown RBP10.84□□□□□ -0.67
NUP54-203ENST00000504173 DNAJB4Q9UDY4 337 aa10.84□□□□□ -0.67
NUP54-203ENST00000504173 ARMCX3Q9UH62 379 aaPredicted RBP10.84□□□□□ -0.67
NUP54-203ENST00000504173 RWDD3Q9Y3V2 267 aa10.84□□□□□ -0.67
NUP54-203ENST00000504173 PCDHB12Q9Y5F1 795 aa10.84□□□□□ -0.67
NUP54-203ENST00000504173 ANK1P16157 1881 aa10.84□□□□□ -0.67
NUP54-203ENST00000504173 PDCD11Q14690 1871 aaKnown RBP10.84□□□□□ -0.67
NUP54-203ENST00000504173 FLNBO75369 2602 aaKnown RBP10.84□□□□□ -0.67
NUP54-203ENST00000504173 MYO7AQ13402 2215 aa10.84□□□□□ -0.67
NUP54-203ENST00000504173 ZFYVE26Q68DK2 2539 aa10.83□□□□□ -0.68
NUP54-203ENST00000504173 CARNS1A5YM72 827 aa10.83□□□□□ -0.68
NUP54-203ENST00000504173 LRRIQ3A6PVS8 624 aaPredicted RBP10.83□□□□□ -0.68
NUP54-203ENST00000504173 TNNC2P02585 160 aa10.83□□□□□ -0.68
NUP54-203ENST00000504173 ALDH2P05091 517 aa10.83□□□□□ -0.68
NUP54-203ENST00000504173 GALTP07902 379 aa10.83□□□□□ -0.68
NUP54-203ENST00000504173 TRIM49P0CI25 452 aa10.83□□□□□ -0.68
NUP54-203ENST00000504173 TRIM49CP0CI26 452 aa10.83□□□□□ -0.68
NUP54-203ENST00000504173 CYP3A5P20815 502 aa10.83□□□□□ -0.68
NUP54-203ENST00000504173 PBX3P40426 434 aa10.83□□□□□ -0.68
NUP54-203ENST00000504173 OR1G1P47890 313 aa10.83□□□□□ -0.68
NUP54-203ENST00000504173 SLC11A1P49279 550 aa10.83□□□□□ -0.68
NUP54-203ENST00000504173 ALDH7A1P49419 539 aaKnown RBP10.83□□□□□ -0.68
NUP54-203ENST00000504173 ZNF165P49910 485 aa10.83□□□□□ -0.68
NUP54-203ENST00000504173 GUCY2FP51841 1108 aa10.83□□□□□ -0.68
NUP54-203ENST00000504173 BCAR1P56945 870 aa10.83□□□□□ -0.68
NUP54-203ENST00000504173 MYL5Q02045 173 aa10.83□□□□□ -0.68
NUP54-203ENST00000504173 SOX4Q06945 474 aaPredicted RBP10.83□□□□□ -0.68
NUP54-203ENST00000504173 NAB2Q15742 525 aa10.83□□□□□ -0.68
NUP54-203ENST00000504173 ZBTB6Q15916 424 aa10.83□□□□□ -0.68
NUP54-203ENST00000504173 DCAF17Q5H9S7 520 aaPredicted RBP10.83□□□□□ -0.68
NUP54-203ENST00000504173 KCNT2Q6UVM3 1135 aa10.83□□□□□ -0.68
NUP54-203ENST00000504173 CREBRFQ8IUR6 639 aa10.83□□□□□ -0.68
NUP54-203ENST00000504173 FAM114A1Q8IWE2 563 aa10.83□□□□□ -0.68
NUP54-203ENST00000504173 SMRP1Q8NCR6 262 aa10.83□□□□□ -0.68
NUP54-203ENST00000504173 PLEKHO2Q8TD55 490 aa10.83□□□□□ -0.68
NUP54-203ENST00000504173 TMC2Q8TDI7 906 aa10.83□□□□□ -0.68
NUP54-203ENST00000504173 PARD3BQ8TEW8 1205 aa10.83□□□□□ -0.68
NUP54-203ENST00000504173 CLP1Q92989 425 aaKnown RBP10.83□□□□□ -0.68
NUP54-203ENST00000504173 ANKRD36BP1Q96IX9 119 aa10.83□□□□□ -0.68
NUP54-203ENST00000504173 CNOT6LQ96LI5 555 aaKnown RBP10.83□□□□□ -0.68
NUP54-203ENST00000504173 UROC1Q96N76 676 aa10.83□□□□□ -0.68
NUP54-203ENST00000504173 MTMR12Q9C0I1 747 aa10.83□□□□□ -0.68
NUP54-203ENST00000504173 GOLGA2P5Q9HBQ8 144 aa10.83□□□□□ -0.68
NUP54-203ENST00000504173 INTS13Q9NVM9 706 aa10.83□□□□□ -0.68
NUP54-203ENST00000504173 DPP3Q9NY33 737 aa10.83□□□□□ -0.68
NUP54-203ENST00000504173 MAGEC2Q9UBF1 373 aaPredicted RBP10.83□□□□□ -0.68
NUP54-203ENST00000504173 CACNG4Q9UBN1 327 aa10.83□□□□□ -0.68
NUP54-203ENST00000504173 FAN1Q9Y2M0 1017 aa10.83□□□□□ -0.68
NUP54-203ENST00000504173 PRG3Q9Y2Y8 225 aaPredicted RBP10.83□□□□□ -0.68
NUP54-203ENST00000504173 NFE2L3Q9Y4A8 694 aa10.83□□□□□ -0.68
NUP54-203ENST00000504173 PTPRJQ12913 1337 aa10.83□□□□□ -0.68
NUP54-203ENST00000504173 KIAA1671Q9BY89 1806 aa10.82□□□□□ -0.68
NUP54-203ENST00000504173 BECN2A8MW95 431 aa10.82□□□□□ -0.68
NUP54-203ENST00000504173 NT5C1B-RDH14C9J2C7 533 aa10.82□□□□□ -0.68
NUP54-203ENST00000504173 PODXLO00592 558 aa10.82□□□□□ -0.68
NUP54-203ENST00000504173 NRP1O14786 923 aa10.82□□□□□ -0.68
NUP54-203ENST00000504173 LMNAP02545 664 aaKnown RBP10.82□□□□□ -0.68
NUP54-203ENST00000504173 LINC00271P0C7V0 271 aa10.82□□□□□ -0.68
NUP54-203ENST00000504173 LRPAP1P30533 357 aa10.82□□□□□ -0.68
NUP54-203ENST00000504173 RPL9P32969 192 aaKnown RBP10.82□□□□□ -0.68
NUP54-203ENST00000504173 PPM1AP35813 382 aa10.82□□□□□ -0.68
NUP54-203ENST00000504173 BMPR1AP36894 532 aa10.82□□□□□ -0.68
NUP54-203ENST00000504173 CLCNKBP51801 687 aa10.82□□□□□ -0.68
NUP54-203ENST00000504173 AP3M2P53677 418 aa10.82□□□□□ -0.68
NUP54-203ENST00000504173 DLG4P78352 724 aa10.82□□□□□ -0.68
NUP54-203ENST00000504173 ENPEPQ07075 957 aa10.82□□□□□ -0.68
NUP54-203ENST00000504173 DUOXA2Q1HG44 320 aa10.82□□□□□ -0.68
NUP54-203ENST00000504173 TCERG1LQ5VWI1 586 aa10.82□□□□□ -0.68
NUP54-203ENST00000504173 LRSAM1Q6UWE0 723 aa10.82□□□□□ -0.68
NUP54-203ENST00000504173 TMEM130Q8N3G9 435 aa10.82□□□□□ -0.68
NUP54-203ENST00000504173 AOPEPQ8N6M6 819 aa10.82□□□□□ -0.68
NUP54-203ENST00000504173 OR5B17Q8NGF7 314 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms