RNA–Protein interactions for RNA: ENST00000504012.1

LINC01340-201, Transcript of long intergenic non-protein coding RNA 1340, humanhuman

TSL 3 BASIC

Gene LINC01340, Length 724 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01340-201ENST00000504012 AIFM3Q96NN9 605 aa6.3□□□□□ -1.4
LINC01340-201ENST00000504012 NLRP3Q96P20 1036 aa6.3□□□□□ -1.4
LINC01340-201ENST00000504012 PHF20Q9BVI0 1012 aa6.3□□□□□ -1.4
LINC01340-201ENST00000504012 OSBPL8Q9BZF1 889 aa6.3□□□□□ -1.4
LINC01340-201ENST00000504012 SEMA4AQ9H3S1 761 aa6.3□□□□□ -1.4
LINC01340-201ENST00000504012 EBF3Q9H4W6 596 aa6.3□□□□□ -1.4
LINC01340-201ENST00000504012 C12orf10Q9HB07 376 aa6.3□□□□□ -1.4
LINC01340-201ENST00000504012 SLC38A10Q9HBR0 1119 aa6.3□□□□□ -1.4
LINC01340-201ENST00000504012 S100A14Q9HCY8 104 aa6.3□□□□□ -1.4
LINC01340-201ENST00000504012 KCNK9Q9NPC2 374 aa6.3□□□□□ -1.4
LINC01340-201ENST00000504012 GPHNQ9NQX3 736 aaPredicted RBP6.3□□□□□ -1.4
LINC01340-201ENST00000504012 TYW1Q9NV66 732 aaKnown RBP6.3□□□□□ -1.4
LINC01340-201ENST00000504012 DDX18Q9NVP1 670 aaKnown RBP6.3□□□□□ -1.4
LINC01340-201ENST00000504012 ARMC1Q9NVT9 282 aa6.3□□□□□ -1.4
LINC01340-201ENST00000504012 KBTBD4Q9NVX7 518 aa6.3□□□□□ -1.4
LINC01340-201ENST00000504012 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.3□□□□□ -1.4
LINC01340-201ENST00000504012 DDX56Q9NY93 547 aaKnown RBP6.3□□□□□ -1.4
LINC01340-201ENST00000504012 WHRNQ9P202 907 aa6.3□□□□□ -1.4
LINC01340-201ENST00000504012 SLAIN2Q9P270 581 aa6.3□□□□□ -1.4
LINC01340-201ENST00000504012 EPS15L1Q9UBC2 864 aa6.3□□□□□ -1.4
LINC01340-201ENST00000504012 RABGEF1Q9UJ41 708 aa6.3□□□□□ -1.4
LINC01340-201ENST00000504012 DBR1Q9UK59 544 aaKnown RBP6.3□□□□□ -1.4
LINC01340-201ENST00000504012 DNAJC12Q9UKB3 198 aa6.3□□□□□ -1.4
LINC01340-201ENST00000504012 ACAD8Q9UKU7 415 aa6.3□□□□□ -1.4
LINC01340-201ENST00000504012 NENFQ9UMX5 172 aa6.3□□□□□ -1.4
LINC01340-201ENST00000504012 POLIQ9UNA4 740 aa6.3□□□□□ -1.4
LINC01340-201ENST00000504012 LZTS1Q9Y250 596 aa6.3□□□□□ -1.4
LINC01340-201ENST00000504012 RABGAP1Q9Y3P9 1069 aa6.3□□□□□ -1.4
LINC01340-201ENST00000504012 PCDHA3Q9Y5H8 950 aa6.3□□□□□ -1.4
LINC01340-201ENST00000504012 USP6P35125 1406 aa6.3□□□□□ -1.4
LINC01340-201ENST00000504012 ECM29Q5VYK3 1845 aa6.29□□□□□ -1.4
LINC01340-201ENST00000504012 IGSF1Q8N6C5 1336 aa6.29□□□□□ -1.4
LINC01340-201ENST00000504012 PHRF1Q9P1Y6 1649 aaKnown RBP6.29□□□□□ -1.4
LINC01340-201ENST00000504012 CARNS1A5YM72 827 aa6.29□□□□□ -1.4
LINC01340-201ENST00000504012 TRIM64BA6NI03 449 aa6.29□□□□□ -1.4
LINC01340-201ENST00000504012 NOTOA8MTQ0 251 aa6.29□□□□□ -1.4
LINC01340-201ENST00000504012 IFRD1O00458 451 aaPredicted RBP6.29□□□□□ -1.4
LINC01340-201ENST00000504012 KPNA4O00629 521 aaPredicted RBP6.29□□□□□ -1.4
LINC01340-201ENST00000504012 SULT1C4O75897 302 aa6.29□□□□□ -1.4
LINC01340-201ENST00000504012 FKBP9O95302 570 aa6.29□□□□□ -1.4
LINC01340-201ENST00000504012 DDX58O95786 925 aaKnown RBP6.29□□□□□ -1.4
LINC01340-201ENST00000504012 TTC4O95801 387 aa6.29□□□□□ -1.4
LINC01340-201ENST00000504012 CAPNS1P04632 268 aa6.29□□□□□ -1.4
LINC01340-201ENST00000504012 ABHD2P08910 425 aa6.29□□□□□ -1.4
LINC01340-201ENST00000504012 ALOX5P09917 674 aa6.29□□□□□ -1.4
LINC01340-201ENST00000504012 ESRRAP11474 423 aaPredicted RBP6.29□□□□□ -1.4
LINC01340-201ENST00000504012 ZNF23P17027 643 aa6.29□□□□□ -1.4
LINC01340-201ENST00000504012 ITIH2P19823 946 aa6.29□□□□□ -1.4
LINC01340-201ENST00000504012 TTKP33981 857 aa6.29□□□□□ -1.4
LINC01340-201ENST00000504012 ETV3P41162 512 aa6.29□□□□□ -1.4
LINC01340-201ENST00000504012 UBA7P41226 1012 aa6.29□□□□□ -1.4
LINC01340-201ENST00000504012 PRKCIP41743 596 aa6.29□□□□□ -1.4
LINC01340-201ENST00000504012 RFX5P48382 616 aaPredicted RBP6.29□□□□□ -1.4
LINC01340-201ENST00000504012 PCYT1AP49585 367 aa6.29□□□□□ -1.4
LINC01340-201ENST00000504012 EIF2B2P49770 351 aaKnown RBP6.29□□□□□ -1.4
LINC01340-201ENST00000504012 PLTPP55058 493 aa6.29□□□□□ -1.4
LINC01340-201ENST00000504012 EIF4A1P60842 406 aaKnown RBP6.29□□□□□ -1.4
LINC01340-201ENST00000504012 BASP1P80723 227 aaKnown RBP6.29□□□□□ -1.4
LINC01340-201ENST00000504012 CHRNEQ04844 493 aa6.29□□□□□ -1.4
LINC01340-201ENST00000504012 GFPT1Q06210 699 aaPredicted RBP6.29□□□□□ -1.4
LINC01340-201ENST00000504012 DNAJC3Q13217 504 aa6.29□□□□□ -1.4
LINC01340-201ENST00000504012 MPP2Q14168 576 aa6.29□□□□□ -1.4
LINC01340-201ENST00000504012 COL19A1Q14993 1142 aa6.29□□□□□ -1.4
LINC01340-201ENST00000504012 EPHA7Q15375 998 aa6.29□□□□□ -1.4
LINC01340-201ENST00000504012 DLGAP5Q15398 846 aa6.29□□□□□ -1.4
LINC01340-201ENST00000504012 FXNQ16595 210 aa6.29□□□□□ -1.4
LINC01340-201ENST00000504012 MOGQ16653 247 aa6.29□□□□□ -1.4
LINC01340-201ENST00000504012 CYP1B1Q16678 543 aa6.29□□□□□ -1.4
LINC01340-201ENST00000504012 WDR45BQ5MNZ6 344 aa6.29□□□□□ -1.4
LINC01340-201ENST00000504012 CCNJQ5T5M9 372 aa6.29□□□□□ -1.4
LINC01340-201ENST00000504012 LCE2DQ5TA82 110 aaPredicted RBP6.29□□□□□ -1.4
LINC01340-201ENST00000504012 PPP2R2DQ66LE6 453 aa6.29□□□□□ -1.4
LINC01340-201ENST00000504012 TMEM214Q6NUQ4 689 aaKnown RBP6.29□□□□□ -1.4
LINC01340-201ENST00000504012 CCDC62Q6P9F0 684 aa6.29□□□□□ -1.4
LINC01340-201ENST00000504012 MPRIPQ6WCQ1 1025 aa6.29□□□□□ -1.4
LINC01340-201ENST00000504012 TPTE2Q6XPS3 522 aa6.29□□□□□ -1.4
LINC01340-201ENST00000504012 LINC00299Q6ZSB3 139 aa6.29□□□□□ -1.4
LINC01340-201ENST00000504012 ANKRD13DQ6ZTN6 518 aa6.29□□□□□ -1.4
LINC01340-201ENST00000504012 CHST3Q7LGC8 479 aa6.29□□□□□ -1.4
LINC01340-201ENST00000504012 KRT28Q7Z3Y7 464 aa6.29□□□□□ -1.4
LINC01340-201ENST00000504012 PEX26Q7Z412 305 aa6.29□□□□□ -1.4
LINC01340-201ENST00000504012 HAUS6Q7Z4H7 955 aa6.29□□□□□ -1.4
LINC01340-201ENST00000504012 DHDDSQ86SQ9 333 aa6.29□□□□□ -1.4
LINC01340-201ENST00000504012 NT5DC3Q86UY8 548 aa6.29□□□□□ -1.4
LINC01340-201ENST00000504012 NME9Q86XW9 330 aa6.29□□□□□ -1.4
LINC01340-201ENST00000504012 MYO1HQ8N1T3 1032 aa6.29□□□□□ -1.4
LINC01340-201ENST00000504012 TTC30BQ8N4P2 665 aa6.29□□□□□ -1.4
LINC01340-201ENST00000504012 ANKRD13CQ8N6S4 541 aa6.29□□□□□ -1.4
LINC01340-201ENST00000504012 VGLL2Q8N8G2 317 aa6.29□□□□□ -1.4
LINC01340-201ENST00000504012 CCDC89Q8N998 374 aa6.29□□□□□ -1.4
LINC01340-201ENST00000504012 ICA1LQ8NDH6 482 aa6.29□□□□□ -1.4
LINC01340-201ENST00000504012 FBXO25Q8TCJ0 367 aa6.29□□□□□ -1.4
LINC01340-201ENST00000504012 EPS8L3Q8TE67 593 aaKnown RBP6.29□□□□□ -1.4
LINC01340-201ENST00000504012 TRUB1Q8WWH5 349 aaKnown RBP6.29□□□□□ -1.4
LINC01340-201ENST00000504012 TTC9Q92623 222 aa6.29□□□□□ -1.4
LINC01340-201ENST00000504012 PTPRUQ92729 1446 aa6.29□□□□□ -1.4
LINC01340-201ENST00000504012 PLEKHA8Q96JA3 519 aa6.29□□□□□ -1.4
LINC01340-201ENST00000504012 NLRP4Q96MN2 994 aa6.29□□□□□ -1.4
LINC01340-201ENST00000504012 ZNF641Q96N77 438 aaPredicted RBP6.29□□□□□ -1.4
LINC01340-201ENST00000504012 TCF12Q99081 682 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms