RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 ARID3BQ8IVW6 561 aaPredicted RBP17.37■□□□□ 0.37
PDLIM7-210ENST00000503827 ZCCHC14Q8WYQ9 949 aaKnown RBP17.37■□□□□ 0.37
PDLIM7-210ENST00000503827 KCNB2Q92953 911 aa17.37■□□□□ 0.37
PDLIM7-210ENST00000503827 SLC38A7Q9NVC3 462 aa17.37■□□□□ 0.37
PDLIM7-210ENST00000503827 NUB1Q9Y5A7 615 aa17.37■□□□□ 0.37
PDLIM7-210ENST00000503827 CITO14578 2027 aa17.37■□□□□ 0.37
PDLIM7-210ENST00000503827 IGF2RP11717 2491 aa17.36■□□□□ 0.37
PDLIM7-210ENST00000503827 PODXLO00592 558 aa17.36■□□□□ 0.37
PDLIM7-210ENST00000503827 CPB1P15086 417 aa17.36■□□□□ 0.37
PDLIM7-210ENST00000503827 YARSP54577 528 aaKnown RBP17.36■□□□□ 0.37
PDLIM7-210ENST00000503827 SOX4Q06945 474 aaPredicted RBP17.36■□□□□ 0.37
PDLIM7-210ENST00000503827 ELF2Q15723 593 aa17.36■□□□□ 0.37
PDLIM7-210ENST00000503827 GPIHBP1Q8IV16 184 aa17.36■□□□□ 0.37
PDLIM7-210ENST00000503827 DEPTORQ8TB45 409 aa17.36■□□□□ 0.37
PDLIM7-210ENST00000503827 GATA6Q92908 595 aa17.36■□□□□ 0.37
PDLIM7-210ENST00000503827 ZFYVE19Q96K21 471 aa17.36■□□□□ 0.37
PDLIM7-210ENST00000503827 SCNM1Q9BWG6 230 aa17.36■□□□□ 0.37
PDLIM7-210ENST00000503827 CCDC113Q9H0I3 377 aa17.36■□□□□ 0.37
PDLIM7-210ENST00000503827 TOPORSQ9NS56 1045 aaPredicted RBP17.36■□□□□ 0.37
PDLIM7-210ENST00000503827 SNX14Q9Y5W7 946 aa17.36■□□□□ 0.37
PDLIM7-210ENST00000503827 A0A087WWV3 80 aa17.35■□□□□ 0.37
PDLIM7-210ENST00000503827 RHOBTB1O94844 696 aa17.35■□□□□ 0.37
PDLIM7-210ENST00000503827 TOP3BO95985 862 aaKnown RBP17.35■□□□□ 0.37
PDLIM7-210ENST00000503827 CEACAM1P13688 526 aa17.35■□□□□ 0.37
PDLIM7-210ENST00000503827 PLCB2Q00722 1185 aa17.35■□□□□ 0.37
PDLIM7-210ENST00000503827 CREB5Q02930 508 aa17.35■□□□□ 0.37
PDLIM7-210ENST00000503827 PLD1Q13393 1074 aa17.35■□□□□ 0.37
PDLIM7-210ENST00000503827 PTPAQ15257 358 aa17.35■□□□□ 0.37
PDLIM7-210ENST00000503827 PKN3Q6P5Z2 889 aa17.35■□□□□ 0.37
PDLIM7-210ENST00000503827 RNF19BQ6ZMZ0 732 aa17.35■□□□□ 0.37
PDLIM7-210ENST00000503827 CAMKK1Q8N5S9 505 aa17.35■□□□□ 0.37
PDLIM7-210ENST00000503827 TMEM209Q96SK2 561 aa17.35■□□□□ 0.37
PDLIM7-210ENST00000503827 DUSP15Q9H1R2 295 aaPredicted RBP17.35■□□□□ 0.37
PDLIM7-210ENST00000503827 OBP2AQ9NY56 170 aa17.35■□□□□ 0.37
PDLIM7-210ENST00000503827 YIPF1Q9Y548 306 aa17.35■□□□□ 0.37
PDLIM7-210ENST00000503827 CAVIN2O95810 425 aa17.34■□□□□ 0.37
PDLIM7-210ENST00000503827 EDN1P05305 212 aa17.34■□□□□ 0.37
PDLIM7-210ENST00000503827 XBP1P17861 261 aa17.34■□□□□ 0.37
PDLIM7-210ENST00000503827 PSMA5P28066 241 aa17.34■□□□□ 0.37
PDLIM7-210ENST00000503827 NAMPTP43490 491 aa17.34■□□□□ 0.37
PDLIM7-210ENST00000503827 EPHB3P54753 998 aa17.34■□□□□ 0.37
PDLIM7-210ENST00000503827 ITPRIPL2Q3MIP1 535 aa17.34■□□□□ 0.37
PDLIM7-210ENST00000503827 BMP2KLQ5H9B9 411 aa17.34■□□□□ 0.37
PDLIM7-210ENST00000503827 ATF7IP2Q5U623 682 aa17.34■□□□□ 0.37
PDLIM7-210ENST00000503827 PKD1L2Q7Z442 2459 aa17.34■□□□□ 0.37
PDLIM7-210ENST00000503827 APPL2Q8NEU8 664 aa17.34■□□□□ 0.37
PDLIM7-210ENST00000503827 CCDC94Q9BW85 323 aaPredicted RBP17.34■□□□□ 0.37
PDLIM7-210ENST00000503827 LRRC3Q9BY71 257 aa17.34■□□□□ 0.37
PDLIM7-210ENST00000503827 TTC12Q9H892 705 aaPredicted RBP17.34■□□□□ 0.37
PDLIM7-210ENST00000503827 TPCN1Q9ULQ1 816 aa17.34■□□□□ 0.37
PDLIM7-210ENST00000503827 CSRP1P21291 193 aaKnown RBP17.33■□□□□ 0.36
PDLIM7-210ENST00000503827 RPL9P32969 192 aaKnown RBP17.33■□□□□ 0.36
PDLIM7-210ENST00000503827 MCM4P33991 863 aa17.33■□□□□ 0.36
PDLIM7-210ENST00000503827 HSPA4P34932 840 aa17.33■□□□□ 0.36
PDLIM7-210ENST00000503827 TNK2Q07912 1038 aa17.33■□□□□ 0.36
PDLIM7-210ENST00000503827 GRSF1Q12849 480 aaKnown RBP eCLIP17.33■□□□□ 0.36
PDLIM7-210ENST00000503827 KARSQ15046 597 aaKnown RBP17.33■□□□□ 0.36
PDLIM7-210ENST00000503827 PPP2R5AQ15172 486 aa17.33■□□□□ 0.36
PDLIM7-210ENST00000503827 CALCRLQ16602 461 aa17.33■□□□□ 0.36
PDLIM7-210ENST00000503827 XKR4Q5GH76 650 aa17.33■□□□□ 0.36
PDLIM7-210ENST00000503827 STXBP5Q5T5C0 1151 aa17.33■□□□□ 0.36
PDLIM7-210ENST00000503827 TMC8Q8IU68 726 aa17.33■□□□□ 0.36
PDLIM7-210ENST00000503827 BPIFB1Q8TDL5 484 aa17.33■□□□□ 0.36
PDLIM7-210ENST00000503827 BSNDQ8WZ55 320 aa17.33■□□□□ 0.36
PDLIM7-210ENST00000503827 DDX12PQ92771 950 aa17.33■□□□□ 0.36
PDLIM7-210ENST00000503827 SUSD3Q96L08 255 aa17.33■□□□□ 0.36
PDLIM7-210ENST00000503827 LRRC3BQ96PB8 259 aa17.33■□□□□ 0.36
PDLIM7-210ENST00000503827 THADAQ6YHU6 1953 aa17.32■□□□□ 0.36
PDLIM7-210ENST00000503827 LNP1A1A4G5 178 aa17.32■□□□□ 0.36
PDLIM7-210ENST00000503827 BCLAF3A2AJT9 711 aaKnown RBP17.32■□□□□ 0.36
PDLIM7-210ENST00000503827 MARCKSP29966 332 aaPredicted RBP17.32■□□□□ 0.36
PDLIM7-210ENST00000503827 GRM5P41594 1212 aa17.32■□□□□ 0.36
PDLIM7-210ENST00000503827 EFNA5P52803 228 aa17.32■□□□□ 0.36
PDLIM7-210ENST00000503827 ARHGAP15Q53QZ3 475 aa17.32■□□□□ 0.36
PDLIM7-210ENST00000503827 ALKAL1Q6UXT8 129 aa17.32■□□□□ 0.36
PDLIM7-210ENST00000503827 COL26A1Q96A83 441 aa17.32■□□□□ 0.36
PDLIM7-210ENST00000503827 ATXN3LQ9H3M9 355 aa17.32■□□□□ 0.36
PDLIM7-210ENST00000503827 TMEM9BQ9NQ34 198 aa17.32■□□□□ 0.36
PDLIM7-210ENST00000503827 THG1LQ9NWX6 298 aaKnown RBP17.32■□□□□ 0.36
PDLIM7-210ENST00000503827 LAMA1P25391 3075 aa17.32■□□□□ 0.36
PDLIM7-210ENST00000503827 ZNF638Q14966 1978 aaKnown RBP17.31■□□□□ 0.36
PDLIM7-210ENST00000503827 KHNYNO15037 678 aaKnown RBP17.31■□□□□ 0.36
PDLIM7-210ENST00000503827 FGF19O95750 216 aa17.31■□□□□ 0.36
PDLIM7-210ENST00000503827 TXKP42681 527 aa17.31■□□□□ 0.36
PDLIM7-210ENST00000503827 ALDH1A3P47895 512 aa17.31■□□□□ 0.36
PDLIM7-210ENST00000503827 TMEM196Q5HYL7 178 aa17.31■□□□□ 0.36
PDLIM7-210ENST00000503827 GPR158Q5T848 1215 aa17.31■□□□□ 0.36
PDLIM7-210ENST00000503827 NT5DC1Q5TFE4 455 aa17.31■□□□□ 0.36
PDLIM7-210ENST00000503827 CEP120Q8N960 986 aa17.31■□□□□ 0.36
PDLIM7-210ENST00000503827 OXER1Q8TDS5 423 aa17.31■□□□□ 0.36
PDLIM7-210ENST00000503827 ZNF274Q96GC6 653 aaPredicted RBP17.31■□□□□ 0.36
PDLIM7-210ENST00000503827 TBC1D32Q96NH3 1257 aa17.31■□□□□ 0.36
PDLIM7-210ENST00000503827 MKNK1Q9BUB5 465 aa17.31■□□□□ 0.36
PDLIM7-210ENST00000503827 TNFSF13BQ9Y275 285 aa17.31■□□□□ 0.36
PDLIM7-210ENST00000503827 NEUROG3Q9Y4Z2 214 aa17.31■□□□□ 0.36
PDLIM7-210ENST00000503827 TAF4O00268 1085 aa17.3■□□□□ 0.36
PDLIM7-210ENST00000503827 MCM2P49736 904 aa17.3■□□□□ 0.36
PDLIM7-210ENST00000503827 OSTNP61366 133 aa17.3■□□□□ 0.36
PDLIM7-210ENST00000503827 CACNB1Q02641 598 aaPredicted RBP17.3■□□□□ 0.36
PDLIM7-210ENST00000503827 TOB2Q14106 344 aaPredicted RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms