RNA–Protein interactions for RNA: ENST00000503341.1

ARHGEF28-205, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 2

Gene ARHGEF28, Length 1,926 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-205ENST00000503341 ZNF200P98182 395 aaPredicted RBP20.35■□□□□ 0.85
ARHGEF28-205ENST00000503341 PCBP1Q15365 356 aaKnown RBP eCLIP20.35■□□□□ 0.85
ARHGEF28-205ENST00000503341 ZNF667Q5HYK9 610 aa20.35■□□□□ 0.85
ARHGEF28-205ENST00000503341 C8orf74Q6P047 294 aa20.35■□□□□ 0.85
ARHGEF28-205ENST00000503341 PASD1Q8IV76 773 aa20.35■□□□□ 0.85
ARHGEF28-205ENST00000503341 TMEM130Q8N3G9 435 aa20.35■□□□□ 0.85
ARHGEF28-205ENST00000503341 BTBD6Q96KE9 485 aa20.35■□□□□ 0.85
ARHGEF28-205ENST00000503341 BCO2Q9BYV7 579 aa20.35■□□□□ 0.85
ARHGEF28-205ENST00000503341 CARD9Q9H257 536 aa20.35■□□□□ 0.85
ARHGEF28-205ENST00000503341 NXF1Q9UBU9 619 aaKnown RBP20.35■□□□□ 0.85
ARHGEF28-205ENST00000503341 L1RE1Q9UN81 338 aa20.35■□□□□ 0.85
ARHGEF28-205ENST00000503341 NPTXRO95502 500 aa20.34■□□□□ 0.85
ARHGEF28-205ENST00000503341 RRM1P23921 792 aa20.34■□□□□ 0.85
ARHGEF28-205ENST00000503341 ATICP31939 592 aa20.34■□□□□ 0.85
ARHGEF28-205ENST00000503341 SSTR3P32745 418 aaPredicted RBP20.34■□□□□ 0.85
ARHGEF28-205ENST00000503341 YWHAEP62258 255 aaKnown RBP20.34■□□□□ 0.85
ARHGEF28-205ENST00000503341 MRPS25P82663 173 aaKnown RBP20.34■□□□□ 0.85
ARHGEF28-205ENST00000503341 TMEM132DQ14C87 1099 aa20.34■□□□□ 0.85
ARHGEF28-205ENST00000503341 SCARA5Q6ZMJ2 495 aa20.34■□□□□ 0.85
ARHGEF28-205ENST00000503341 CCNI2Q6ZMN8 369 aaPredicted RBP20.34■□□□□ 0.85
ARHGEF28-205ENST00000503341 PHF13Q86YI8 300 aaPredicted RBP20.34■□□□□ 0.85
ARHGEF28-205ENST00000503341 SMC1BQ8NDV3 1235 aa20.34■□□□□ 0.85
ARHGEF28-205ENST00000503341 VCPIP1Q96JH7 1222 aa20.34■□□□□ 0.85
ARHGEF28-205ENST00000503341 GABRQQ9UN88 632 aa20.34■□□□□ 0.85
ARHGEF28-205ENST00000503341 C2CD2Q9Y426 696 aa20.34■□□□□ 0.85
ARHGEF28-205ENST00000503341 C17orf102A2RUQ5 167 aa20.33■□□□□ 0.85
ARHGEF28-205ENST00000503341 CYBAP13498 195 aa20.33■□□□□ 0.85
ARHGEF28-205ENST00000503341 EIF4BP23588 611 aaKnown RBP20.33■□□□□ 0.85
ARHGEF28-205ENST00000503341 HOXC8P31273 242 aa20.33■□□□□ 0.85
ARHGEF28-205ENST00000503341 SLC7A5Q01650 507 aa20.33■□□□□ 0.85
ARHGEF28-205ENST00000503341 WDR72Q3MJ13 1102 aa20.33■□□□□ 0.85
ARHGEF28-205ENST00000503341 ZNF394Q53GI3 561 aa20.33■□□□□ 0.85
ARHGEF28-205ENST00000503341 PPP1R2P3Q6NXS1 205 aa20.33■□□□□ 0.85
ARHGEF28-205ENST00000503341 SLC27A1Q6PCB7 646 aa20.33■□□□□ 0.85
ARHGEF28-205ENST00000503341 APBB1IPQ7Z5R6 666 aaPredicted RBP20.33■□□□□ 0.85
ARHGEF28-205ENST00000503341 NT5DC4Q86YG4 428 aa20.33■□□□□ 0.85
ARHGEF28-205ENST00000503341 CD302Q8IX05 232 aa20.33■□□□□ 0.85
ARHGEF28-205ENST00000503341 TRIB2Q92519 343 aa20.33■□□□□ 0.85
ARHGEF28-205ENST00000503341 ALG3Q92685 438 aa20.33■□□□□ 0.85
ARHGEF28-205ENST00000503341 CD101Q93033 1021 aa20.33■□□□□ 0.85
ARHGEF28-205ENST00000503341 VRTNQ9H8Y1 702 aa20.33■□□□□ 0.85
ARHGEF28-205ENST00000503341 MYADML2A6NDP7 307 aa20.33■□□□□ 0.84
ARHGEF28-205ENST00000503341 TNNC1P63316 161 aa20.33■□□□□ 0.84
ARHGEF28-205ENST00000503341 LACTBP83111 547 aaPredicted RBP20.33■□□□□ 0.84
ARHGEF28-205ENST00000503341 MFSD14CQ5VZR4 134 aa20.33■□□□□ 0.84
ARHGEF28-205ENST00000503341 CYP4F22Q6NT55 531 aa20.33■□□□□ 0.84
ARHGEF28-205ENST00000503341 KRT12Q99456 494 aa20.33■□□□□ 0.84
ARHGEF28-205ENST00000503341 ZSWIM1Q9BR11 485 aa20.33■□□□□ 0.84
ARHGEF28-205ENST00000503341 WNT8AQ9H1J5 351 aa20.33■□□□□ 0.84
ARHGEF28-205ENST00000503341 GPBP1L1Q9HC44 474 aaPredicted RBP20.33■□□□□ 0.84
ARHGEF28-205ENST00000503341 KIF3CO14782 793 aa20.32■□□□□ 0.84
ARHGEF28-205ENST00000503341 ALDH1A1P00352 501 aa20.32■□□□□ 0.84
ARHGEF28-205ENST00000503341 C6orf222P0C671 652 aaPredicted RBP20.32■□□□□ 0.84
ARHGEF28-205ENST00000503341 BRD2P25440 801 aaKnown RBP20.32■□□□□ 0.84
ARHGEF28-205ENST00000503341 PEX5P50542 639 aa20.32■□□□□ 0.84
ARHGEF28-205ENST00000503341 PTP4A2Q12974 167 aa20.32■□□□□ 0.84
ARHGEF28-205ENST00000503341 C2CD6Q53TS8 623 aa20.32■□□□□ 0.84
ARHGEF28-205ENST00000503341 NOTUMQ6P988 496 aa20.32■□□□□ 0.84
ARHGEF28-205ENST00000503341 PAXIP1Q6ZW49 1069 aaPredicted RBP20.32■□□□□ 0.84
ARHGEF28-205ENST00000503341 UBL4BQ8N7F7 174 aa20.32■□□□□ 0.84
ARHGEF28-205ENST00000503341 KRT35Q92764 455 aa20.32■□□□□ 0.84
ARHGEF28-205ENST00000503341 C11orf70Q9BRQ4 267 aa20.32■□□□□ 0.84
ARHGEF28-205ENST00000503341 EIF2AQ9BY44 585 aaKnown RBP20.32■□□□□ 0.84
ARHGEF28-205ENST00000503341 SDCBP2Q9H190 292 aa20.32■□□□□ 0.84
ARHGEF28-205ENST00000503341 PLEKHA5Q9HAU0 1116 aa20.32■□□□□ 0.84
ARHGEF28-205ENST00000503341 ADAM22Q9P0K1 906 aa20.32■□□□□ 0.84
ARHGEF28-205ENST00000503341 STIM2Q9P246 746 aa20.32■□□□□ 0.84
ARHGEF28-205ENST00000503341 MAP2K7O14733 419 aa20.31■□□□□ 0.84
ARHGEF28-205ENST00000503341 KPNA6O60684 536 aa20.31■□□□□ 0.84
ARHGEF28-205ENST00000503341 GNAT1P11488 350 aa20.31■□□□□ 0.84
ARHGEF28-205ENST00000503341 POLR2BP30876 1174 aaKnown RBP20.31■□□□□ 0.84
ARHGEF28-205ENST00000503341 FLT3LGP49771 235 aa20.31■□□□□ 0.84
ARHGEF28-205ENST00000503341 GJA9P57773 515 aa20.31■□□□□ 0.84
ARHGEF28-205ENST00000503341 SNX17Q15036 470 aa20.31■□□□□ 0.84
ARHGEF28-205ENST00000503341 LIN9Q5TKA1 542 aa20.31■□□□□ 0.84
ARHGEF28-205ENST00000503341 C7orf31Q8N865 590 aa20.31■□□□□ 0.84
ARHGEF28-205ENST00000503341 TMEM40Q8WWA1 233 aa20.31■□□□□ 0.84
ARHGEF28-205ENST00000503341 TFAP2BQ92481 460 aa20.31■□□□□ 0.84
ARHGEF28-205ENST00000503341 RNPC3Q96LT9 517 aaKnown RBP20.31■□□□□ 0.84
ARHGEF28-205ENST00000503341 HINFPQ9BQA5 517 aa20.31■□□□□ 0.84
ARHGEF28-205ENST00000503341 AP1M1Q9BXS5 423 aa20.31■□□□□ 0.84
ARHGEF28-205ENST00000503341 DPP3Q9NY33 737 aa20.31■□□□□ 0.84
ARHGEF28-205ENST00000503341 ITGA11Q9UKX5 1188 aa20.31■□□□□ 0.84
ARHGEF28-205ENST00000503341 AGAP1Q9UPQ3 857 aa20.31■□□□□ 0.84
ARHGEF28-205ENST00000503341 CCDC188H7C350 402 aa20.31■□□□□ 0.84
ARHGEF28-205ENST00000503341 KRIT1O00522 736 aa20.31■□□□□ 0.84
ARHGEF28-205ENST00000503341 LSM8O95777 96 aaKnown RBP20.31■□□□□ 0.84
ARHGEF28-205ENST00000503341 MYBL2P10244 700 aa20.31■□□□□ 0.84
ARHGEF28-205ENST00000503341 CTNNA2P26232 953 aa20.31■□□□□ 0.84
ARHGEF28-205ENST00000503341 AXLP30530 894 aa20.31■□□□□ 0.84
ARHGEF28-205ENST00000503341 RAP1GAPP47736 663 aa20.31■□□□□ 0.84
ARHGEF28-205ENST00000503341 GUCY2FP51841 1108 aa20.31■□□□□ 0.84
ARHGEF28-205ENST00000503341 C1QBPQ07021 282 aaKnown RBP20.31■□□□□ 0.84
ARHGEF28-205ENST00000503341 MAP9Q49MG5 647 aa20.31■□□□□ 0.84
ARHGEF28-205ENST00000503341 LLGL2Q6P1M3 1020 aa20.31■□□□□ 0.84
ARHGEF28-205ENST00000503341 PHLDB2Q86SQ0 1253 aa20.31■□□□□ 0.84
ARHGEF28-205ENST00000503341 CPNE8Q86YQ8 564 aa20.31■□□□□ 0.84
ARHGEF28-205ENST00000503341 NME8Q8N427 588 aa20.31■□□□□ 0.84
ARHGEF28-205ENST00000503341 SNTG2Q9NY99 539 aa20.31■□□□□ 0.84
ARHGEF28-205ENST00000503341 ANAPC7Q9UJX3 599 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms