RNA–Protein interactions for RNA: ENST00000498837.1

SEC61A1-207, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2

Gene SEC61A1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-207ENST00000498837 FNTBP49356 437 aa16.02■□□□□ 0.16
SEC61A1-207ENST00000498837 SRSF5Q13243 272 aaKnown RBP16.02■□□□□ 0.16
SEC61A1-207ENST00000498837 NBR1Q14596 966 aa16.02■□□□□ 0.16
SEC61A1-207ENST00000498837 PPP2R5DQ14738 602 aa16.02■□□□□ 0.16
SEC61A1-207ENST00000498837 WDR44Q5JSH3 913 aa16.02■□□□□ 0.16
SEC61A1-207ENST00000498837 TTC38Q5R3I4 469 aa16.02■□□□□ 0.16
SEC61A1-207ENST00000498837 MPZL3Q6UWV2 235 aa16.02■□□□□ 0.16
SEC61A1-207ENST00000498837 SHKBP1Q8TBC3 707 aa16.02■□□□□ 0.16
SEC61A1-207ENST00000498837 KMT5AQ9NQR1 393 aa16.02■□□□□ 0.16
SEC61A1-207ENST00000498837 ASAH2Q9NR71 780 aa16.02■□□□□ 0.16
SEC61A1-207ENST00000498837 RBM12Q9NTZ6 932 aaKnown RBP16.02■□□□□ 0.16
SEC61A1-207ENST00000498837 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.01■□□□□ 0.15
SEC61A1-207ENST00000498837 ADRB1P08588 477 aa16.01■□□□□ 0.15
SEC61A1-207ENST00000498837 HOXC13P31276 330 aa16.01■□□□□ 0.15
SEC61A1-207ENST00000498837 SOX9P48436 509 aa16.01■□□□□ 0.15
SEC61A1-207ENST00000498837 FXR2P51116 673 aaKnown RBP eCLIP16.01■□□□□ 0.15
SEC61A1-207ENST00000498837 NEK4P51957 841 aa16.01■□□□□ 0.15
SEC61A1-207ENST00000498837 MAPK7Q13164 816 aa16.01■□□□□ 0.15
SEC61A1-207ENST00000498837 ORC2Q13416 577 aaPredicted RBP16.01■□□□□ 0.15
SEC61A1-207ENST00000498837 SIM2Q14190 667 aaPredicted RBP16.01■□□□□ 0.15
SEC61A1-207ENST00000498837 SLC10A6Q3KNW5 377 aa16.01■□□□□ 0.15
SEC61A1-207ENST00000498837 APPL2Q8NEU8 664 aa16.01■□□□□ 0.15
SEC61A1-207ENST00000498837 LRRC3Q9BY71 257 aa16.01■□□□□ 0.15
SEC61A1-207ENST00000498837 SLITRK6Q9H5Y7 841 aa16.01■□□□□ 0.15
SEC61A1-207ENST00000498837 SEMA4GQ9NTN9 838 aa16.01■□□□□ 0.15
SEC61A1-207ENST00000498837 TUBGCP4Q9UGJ1 667 aa16.01■□□□□ 0.15
SEC61A1-207ENST00000498837 PCDHB8Q9UN66 801 aa16.01■□□□□ 0.15
SEC61A1-207ENST00000498837 TIMM13Q9Y5L4 95 aaPredicted RBP16.01■□□□□ 0.15
SEC61A1-207ENST00000498837 OBSL1O75147 1896 aa16.01■□□□□ 0.15
SEC61A1-207ENST00000498837 TSC2P49815 1807 aa16.01■□□□□ 0.15
SEC61A1-207ENST00000498837 SLC38A8A6NNN8 435 aa16■□□□□ 0.15
SEC61A1-207ENST00000498837 SFI1A8K8P3 1242 aa16■□□□□ 0.15
SEC61A1-207ENST00000498837 SLC30A4O14863 429 aa16■□□□□ 0.15
SEC61A1-207ENST00000498837 SLC16A4O15374 487 aa16■□□□□ 0.15
SEC61A1-207ENST00000498837 GDF9O60383 454 aa16■□□□□ 0.15
SEC61A1-207ENST00000498837 OR4Q2P0C623 313 aa16■□□□□ 0.15
SEC61A1-207ENST00000498837 MARCKSP29966 332 aaPredicted RBP16■□□□□ 0.15
SEC61A1-207ENST00000498837 PTGDRQ13258 359 aa16■□□□□ 0.15
SEC61A1-207ENST00000498837 DMP1Q13316 513 aaPredicted RBP16■□□□□ 0.15
SEC61A1-207ENST00000498837 PPM1JQ5JR12 505 aa16■□□□□ 0.15
SEC61A1-207ENST00000498837 STXBP5Q5T5C0 1151 aa16■□□□□ 0.15
SEC61A1-207ENST00000498837 SPEM1Q8N4L4 309 aa16■□□□□ 0.15
SEC61A1-207ENST00000498837 LEMD2Q8NC56 503 aa16■□□□□ 0.15
SEC61A1-207ENST00000498837 NETO1Q8TDF5 533 aa16■□□□□ 0.15
SEC61A1-207ENST00000498837 CSGALNACT1Q8TDX6 532 aa16■□□□□ 0.15
SEC61A1-207ENST00000498837 SNX29Q8TEQ0 813 aa16■□□□□ 0.15
SEC61A1-207ENST00000498837 C8orf76Q96K31 380 aa16■□□□□ 0.15
SEC61A1-207ENST00000498837 PGLYRP2Q96PD5 576 aa16■□□□□ 0.15
SEC61A1-207ENST00000498837 RUSC1Q9BVN2 902 aa16■□□□□ 0.15
SEC61A1-207ENST00000498837 FOXP1Q9H334 677 aaPredicted RBP16■□□□□ 0.15
SEC61A1-207ENST00000498837 CRISPLD1Q9H336 500 aa16■□□□□ 0.15
SEC61A1-207ENST00000498837 C2orf42Q9NWW7 574 aa16■□□□□ 0.15
SEC61A1-207ENST00000498837 MAFFQ9ULX9 164 aa16■□□□□ 0.15
SEC61A1-207ENST00000498837 YIPF1Q9Y548 306 aa16■□□□□ 0.15
SEC61A1-207ENST00000498837 CHD6Q8TD26 2715 aa15.99■□□□□ 0.15
SEC61A1-207ENST00000498837 A0A1W2PRU2 124 aa15.99■□□□□ 0.15
SEC61A1-207ENST00000498837 PP2D1A8MPX8 630 aa15.99■□□□□ 0.15
SEC61A1-207ENST00000498837 K7ESF4 209 aa15.99■□□□□ 0.15
SEC61A1-207ENST00000498837 LRP3O75074 770 aa15.99■□□□□ 0.15
SEC61A1-207ENST00000498837 CDC25AP30304 524 aa15.99■□□□□ 0.15
SEC61A1-207ENST00000498837 KPNA1P52294 538 aaPredicted RBP15.99■□□□□ 0.15
SEC61A1-207ENST00000498837 MLLT6P55198 1093 aaPredicted RBP15.99■□□□□ 0.15
SEC61A1-207ENST00000498837 SPAG1Q07617 926 aa15.99■□□□□ 0.15
SEC61A1-207ENST00000498837 PDIA5Q14554 519 aa15.99■□□□□ 0.15
SEC61A1-207ENST00000498837 HEATR6Q6AI08 1181 aaKnown RBP15.99■□□□□ 0.15
SEC61A1-207ENST00000498837 RINT1Q6NUQ1 792 aa15.99■□□□□ 0.15
SEC61A1-207ENST00000498837 TXNDC11Q6PKC3 985 aa15.99■□□□□ 0.15
SEC61A1-207ENST00000498837 PRR23CQ6ZRP0 262 aa15.99■□□□□ 0.15
SEC61A1-207ENST00000498837 Q6ZS52 159 aa15.99■□□□□ 0.15
SEC61A1-207ENST00000498837 C1orf186Q6ZWK4 172 aa15.99■□□□□ 0.15
SEC61A1-207ENST00000498837 KCNK18Q7Z418 384 aa15.99■□□□□ 0.15
SEC61A1-207ENST00000498837 TMC8Q8IU68 726 aa15.99■□□□□ 0.15
SEC61A1-207ENST00000498837 YAF2Q8IY57 180 aa15.99■□□□□ 0.15
SEC61A1-207ENST00000498837 IGSF22Q8N9C0 903 aa15.99■□□□□ 0.15
SEC61A1-207ENST00000498837 BEST2Q8NFU1 509 aa15.99■□□□□ 0.15
SEC61A1-207ENST00000498837 TTC8Q8TAM2 541 aa15.99■□□□□ 0.15
SEC61A1-207ENST00000498837 GPR88Q9GZN0 384 aa15.99■□□□□ 0.15
SEC61A1-207ENST00000498837 DNAJC25Q9H1X3 360 aa15.99■□□□□ 0.15
SEC61A1-207ENST00000498837 DNM3Q9UQ16 869 aa15.99■□□□□ 0.15
SEC61A1-207ENST00000498837 RBM19Q9Y4C8 960 aaKnown RBP15.99■□□□□ 0.15
SEC61A1-207ENST00000498837 M0QZQ0 153 aa15.98■□□□□ 0.15
SEC61A1-207ENST00000498837 CHADO15335 359 aa15.98■□□□□ 0.15
SEC61A1-207ENST00000498837 YWHAHQ04917 246 aaPredicted RBP15.98■□□□□ 0.15
SEC61A1-207ENST00000498837 DUSP4Q13115 394 aa15.98■□□□□ 0.15
SEC61A1-207ENST00000498837 NOLC1Q14978 699 aaKnown RBP eCLIP15.98■□□□□ 0.15
SEC61A1-207ENST00000498837 CSRP2Q16527 193 aa15.98■□□□□ 0.15
SEC61A1-207ENST00000498837 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.98■□□□□ 0.15
SEC61A1-207ENST00000498837 ARID3BQ8IVW6 561 aaPredicted RBP15.98■□□□□ 0.15
SEC61A1-207ENST00000498837 CCDC83Q8IWF9 413 aa15.98■□□□□ 0.15
SEC61A1-207ENST00000498837 E2F7Q96AV8 911 aa15.98■□□□□ 0.15
SEC61A1-207ENST00000498837 ZFYVE19Q96K21 471 aa15.98■□□□□ 0.15
SEC61A1-207ENST00000498837 DRC1Q96MC2 740 aa15.98■□□□□ 0.15
SEC61A1-207ENST00000498837 LRRC3BQ96PB8 259 aa15.98■□□□□ 0.15
SEC61A1-207ENST00000498837 ANKFY1Q9P2R3 1169 aa15.98■□□□□ 0.15
SEC61A1-207ENST00000498837 MYO16Q9Y6X6 1858 aa15.98■□□□□ 0.15
SEC61A1-207ENST00000498837 CFAP47Q6ZTR5 3102 aa15.98■□□□□ 0.15
SEC61A1-207ENST00000498837 SPECC1L-ADORA2AF8WAN1 911 aa15.97■□□□□ 0.15
SEC61A1-207ENST00000498837 TOM1L1O75674 476 aa15.97■□□□□ 0.15
SEC61A1-207ENST00000498837 OAZ2O95190 189 aa15.97■□□□□ 0.15
SEC61A1-207ENST00000498837 CXCL8P10145 99 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms