RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 MSRAQ9UJ68 235 aa21.21■□□□□ 0.99
SCAMP3-209ENST00000497470 ADAM28Q9UKQ2 775 aa21.21■□□□□ 0.99
SCAMP3-209ENST00000497470 MYO6Q9UM54 1294 aa21.21■□□□□ 0.99
SCAMP3-209ENST00000497470 CASTOR2A6NHX0 329 aa21.2■□□□□ 0.98
SCAMP3-209ENST00000497470 B4GALT3O60512 393 aa21.2■□□□□ 0.98
SCAMP3-209ENST00000497470 TACC1O75410 805 aa21.2■□□□□ 0.98
SCAMP3-209ENST00000497470 CAPN15O75808 1086 aa21.2■□□□□ 0.98
SCAMP3-209ENST00000497470 CYP11A1P05108 521 aa21.2■□□□□ 0.98
SCAMP3-209ENST00000497470 KRT19P08727 400 aa21.2■□□□□ 0.98
SCAMP3-209ENST00000497470 TYMPP19971 482 aa21.2■□□□□ 0.98
SCAMP3-209ENST00000497470 IBSPP21815 317 aaPredicted RBP21.2■□□□□ 0.98
SCAMP3-209ENST00000497470 CDC25BP30305 580 aa21.2■□□□□ 0.98
SCAMP3-209ENST00000497470 BMPR1AP36894 532 aa21.2■□□□□ 0.98
SCAMP3-209ENST00000497470 OR1G1P47890 313 aa21.2■□□□□ 0.98
SCAMP3-209ENST00000497470 NOP14P78316 857 aaKnown RBP21.2■□□□□ 0.98
SCAMP3-209ENST00000497470 UBE3AQ05086 875 aa21.2■□□□□ 0.98
SCAMP3-209ENST00000497470 PAN2Q504Q3 1202 aaKnown RBP21.2■□□□□ 0.98
SCAMP3-209ENST00000497470 PRPF38BQ5VTL8 546 aaKnown RBP21.2■□□□□ 0.98
SCAMP3-209ENST00000497470 FAM117BQ6P1L5 589 aa21.2■□□□□ 0.98
SCAMP3-209ENST00000497470 TMEM86AQ8N2M4 240 aa21.2■□□□□ 0.98
SCAMP3-209ENST00000497470 IGSF21Q96ID5 467 aa21.2■□□□□ 0.98
SCAMP3-209ENST00000497470 BCO2Q9BYV7 579 aa21.2■□□□□ 0.98
SCAMP3-209ENST00000497470 NIF3L1Q9GZT8 377 aa21.2■□□□□ 0.98
SCAMP3-209ENST00000497470 GOLGA2P5Q9HBQ8 144 aa21.2■□□□□ 0.98
SCAMP3-209ENST00000497470 TMEM265A0A087WTH1 108 aa21.19■□□□□ 0.98
SCAMP3-209ENST00000497470 LINC01553A4QN01 128 aa21.19■□□□□ 0.98
SCAMP3-209ENST00000497470 TEX33O43247 280 aa21.19■□□□□ 0.98
SCAMP3-209ENST00000497470 ERVK-21P61565 698 aa21.19■□□□□ 0.98
SCAMP3-209ENST00000497470 YWHAEP62258 255 aaKnown RBP21.19■□□□□ 0.98
SCAMP3-209ENST00000497470 TRIM14Q14142 442 aa21.19■□□□□ 0.98
SCAMP3-209ENST00000497470 SYCP1Q15431 976 aa21.19■□□□□ 0.98
SCAMP3-209ENST00000497470 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.19■□□□□ 0.98
SCAMP3-209ENST00000497470 TMCO2Q7Z6W1 182 aaPredicted RBP21.19■□□□□ 0.98
SCAMP3-209ENST00000497470 MMRN2Q9H8L6 949 aa21.19■□□□□ 0.98
SCAMP3-209ENST00000497470 MARCH5Q9NX47 278 aa21.19■□□□□ 0.98
SCAMP3-209ENST00000497470 NUB1Q9Y5A7 615 aa21.19■□□□□ 0.98
SCAMP3-209ENST00000497470 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.19■□□□□ 0.98
SCAMP3-209ENST00000497470 SF3B1O75533 1304 aaKnown RBP eCLIP21.19■□□□□ 0.98
SCAMP3-209ENST00000497470 TADA2AO75478 443 aa21.18■□□□□ 0.98
SCAMP3-209ENST00000497470 ZNF75DP51815 510 aa21.18■□□□□ 0.98
SCAMP3-209ENST00000497470 GUCY2FP51841 1108 aa21.18■□□□□ 0.98
SCAMP3-209ENST00000497470 WDR72Q3MJ13 1102 aa21.18■□□□□ 0.98
SCAMP3-209ENST00000497470 KLHDC7AQ5VTJ3 777 aa21.18■□□□□ 0.98
SCAMP3-209ENST00000497470 PDXDC1Q6P996 788 aa21.18■□□□□ 0.98
SCAMP3-209ENST00000497470 DDX53Q86TM3 631 aaKnown RBP21.18■□□□□ 0.98
SCAMP3-209ENST00000497470 VSTM4Q8IW00 320 aa21.18■□□□□ 0.98
SCAMP3-209ENST00000497470 C3orf58Q8NDZ4 430 aa21.18■□□□□ 0.98
SCAMP3-209ENST00000497470 TGS1Q96RS0 853 aaKnown RBP21.18■□□□□ 0.98
SCAMP3-209ENST00000497470 PAAF1Q9BRP4 392 aa21.18■□□□□ 0.98
SCAMP3-209ENST00000497470 SIX2Q9NPC8 291 aa21.18■□□□□ 0.98
SCAMP3-209ENST00000497470 PCDHB8Q9UN66 801 aa21.18■□□□□ 0.98
SCAMP3-209ENST00000497470 A0A1W2PQJ5 194 aa21.17■□□□□ 0.98
SCAMP3-209ENST00000497470 KIF4AO95239 1232 aa21.17■□□□□ 0.98
SCAMP3-209ENST00000497470 UCHL3P15374 230 aa21.17■□□□□ 0.98
SCAMP3-209ENST00000497470 SLC9A1P19634 815 aa21.17■□□□□ 0.98
SCAMP3-209ENST00000497470 MFAP3P55082 362 aa21.17■□□□□ 0.98
SCAMP3-209ENST00000497470 TNNC1P63316 161 aa21.17■□□□□ 0.98
SCAMP3-209ENST00000497470 KRT17Q04695 432 aa21.17■□□□□ 0.98
SCAMP3-209ENST00000497470 SPECC1LQ69YQ0 1117 aa21.17■□□□□ 0.98
SCAMP3-209ENST00000497470 CHRDL2Q6WN34 429 aa21.17■□□□□ 0.98
SCAMP3-209ENST00000497470 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.17■□□□□ 0.98
SCAMP3-209ENST00000497470 APPL2Q8NEU8 664 aa21.17■□□□□ 0.98
SCAMP3-209ENST00000497470 NEK11Q8NG66 645 aa21.17■□□□□ 0.98
SCAMP3-209ENST00000497470 TMEM169Q96HH4 297 aa21.17■□□□□ 0.98
SCAMP3-209ENST00000497470 SENP8Q96LD8 212 aa21.17■□□□□ 0.98
SCAMP3-209ENST00000497470 CRACR2AQ9BSW2 395 aa21.17■□□□□ 0.98
SCAMP3-209ENST00000497470 PBX4Q9BYU1 374 aa21.17■□□□□ 0.98
SCAMP3-209ENST00000497470 DNAI2Q9GZS0 605 aa21.17■□□□□ 0.98
SCAMP3-209ENST00000497470 NUCKS1Q9H1E3 243 aaKnown RBP21.17■□□□□ 0.98
SCAMP3-209ENST00000497470 PCDH10Q9P2E7 1040 aa21.17■□□□□ 0.98
SCAMP3-209ENST00000497470 CNTN6Q9UQ52 1028 aa21.17■□□□□ 0.98
SCAMP3-209ENST00000497470 SSX2IPQ9Y2D8 614 aa21.17■□□□□ 0.98
SCAMP3-209ENST00000497470 SCN1AP35498 2009 aa21.16■□□□□ 0.98
SCAMP3-209ENST00000497470 GABRDO14764 452 aa21.16■□□□□ 0.98
SCAMP3-209ENST00000497470 PPEF2O14830 753 aa21.16■□□□□ 0.98
SCAMP3-209ENST00000497470 SPTLC1O15269 473 aa21.16■□□□□ 0.98
SCAMP3-209ENST00000497470 AP5Z1O43299 807 aa21.16■□□□□ 0.98
SCAMP3-209ENST00000497470 HUS1O60921 280 aa21.16■□□□□ 0.98
SCAMP3-209ENST00000497470 ODC1P11926 461 aa21.16■□□□□ 0.98
SCAMP3-209ENST00000497470 FGFR3P22607 806 aa21.16■□□□□ 0.98
SCAMP3-209ENST00000497470 INCA1Q0VD86 236 aa21.16■□□□□ 0.98
SCAMP3-209ENST00000497470 CUL2Q13617 745 aa21.16■□□□□ 0.98
SCAMP3-209ENST00000497470 TIGD5Q53EQ6 642 aa21.16■□□□□ 0.98
SCAMP3-209ENST00000497470 SPOUT1Q5T280 376 aaKnown RBP21.16■□□□□ 0.98
SCAMP3-209ENST00000497470 PHLDB3Q6NSJ2 640 aa21.16■□□□□ 0.98
SCAMP3-209ENST00000497470 FUT10Q6P4F1 479 aa21.16■□□□□ 0.98
SCAMP3-209ENST00000497470 UNC93AQ86WB7 457 aa21.16■□□□□ 0.98
SCAMP3-209ENST00000497470 C11orf84Q9BUA3 381 aaPredicted RBP21.16■□□□□ 0.98
SCAMP3-209ENST00000497470 NAA15Q9BXJ9 866 aaKnown RBP21.16■□□□□ 0.98
SCAMP3-209ENST00000497470 TTYH3Q9C0H2 523 aa21.16■□□□□ 0.98
SCAMP3-209ENST00000497470 GANQ9H2C0 597 aa21.16■□□□□ 0.98
SCAMP3-209ENST00000497470 APOBEC3GQ9HC16 384 aaKnown RBP21.16■□□□□ 0.98
SCAMP3-209ENST00000497470 CHST7Q9NS84 486 aa21.16■□□□□ 0.98
SCAMP3-209ENST00000497470 CEP72Q9P209 647 aa21.16■□□□□ 0.98
SCAMP3-209ENST00000497470 PUF60Q9UHX1 559 aaKnown RBP21.16■□□□□ 0.98
SCAMP3-209ENST00000497470 RBAK-RBAKDNI3L0D1 243 aa21.15■□□□□ 0.98
SCAMP3-209ENST00000497470 NOL4O94818 638 aa21.15■□□□□ 0.98
SCAMP3-209ENST00000497470 OAZ2O95190 189 aa21.15■□□□□ 0.98
SCAMP3-209ENST00000497470 C1RP00736 705 aa21.15■□□□□ 0.98
SCAMP3-209ENST00000497470 WARSP23381 471 aaKnown RBP21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms